Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_A16
         (113 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   0.79 
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   1.8  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   1.8  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       19   4.2  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    18   9.7  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    18   9.7  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 0.79
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 68  INKAIFPVFHYTSTFQYLLVRT 3
           +N+  +P F+ T+  QYL  +T
Sbjct: 371 LNEDFYPTFNQTNVDQYLYNQT 392


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 12  EEILESGSVMENWKYRF 62
           EE+ E   +++NW  +F
Sbjct: 62  EEVSEKYGILQNWMDKF 78


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -2

Query: 103 CVAQVPRWN 77
           CV ++PRW+
Sbjct: 180 CVVKIPRWD 188


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +1

Query: 22  WKVEV*WKTGNI 57
           W + V WK G++
Sbjct: 98  WAITVSWKAGDV 109


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 18  ILESGSVMENWKY 56
           IL+SG++   W Y
Sbjct: 276 ILQSGTLNAPWSY 288


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 18  ILESGSVMENWKY 56
           IL+SG++   W Y
Sbjct: 276 ILQSGTLNAPWSY 288


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,753
Number of Sequences: 438
Number of extensions: 308
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 18
effective length of database: 138,459
effective search space used:  2630721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)