Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_A14
         (155 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   0.80 
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    19   5.6  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    18   9.8  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    18   9.8  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 0.80
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 85  ATAEDGCDGEVAAVTRVTRRHHV 17
           ++ E  C GEVA++T     HHV
Sbjct: 494 SSTESTCSGEVASLTEY---HHV 513


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 96  KEVDEQMMNIQNKNS 140
           KE+ EQM    N+NS
Sbjct: 200 KELGEQMNRFINENS 214


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 124 MFIICSSTSFTGHATAEDGCDG 59
           + I+C+   +T  A  E+G  G
Sbjct: 8   LLIVCALFIYTVTAETEEGQSG 29


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 124 MFIICSSTSFTGHATAEDGCDG 59
           + I+C+   +T  A  E+G  G
Sbjct: 8   LLIVCALFIYTVTAETEEGQSG 29


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,236
Number of Sequences: 438
Number of extensions: 261
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 31
effective length of database: 132,765
effective search space used:  2655300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)