Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_A11
(281 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 71 2e-13
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 71 2e-13
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 71 2e-13
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 54 2e-08
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 54 2e-08
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 54 2e-08
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 49 4e-07
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 49 4e-07
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 48 1e-06
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 48 1e-06
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 44 1e-05
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 44 1e-05
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 44 1e-05
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 42 7e-05
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 40 3e-04
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 40 3e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 39 5e-04
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 39 5e-04
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 39 5e-04
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 39 6e-04
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 39 6e-04
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 39 6e-04
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 39 6e-04
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 39 6e-04
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 39 6e-04
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 39 6e-04
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 39 6e-04
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 37 0.002
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 37 0.003
U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna bi... 37 0.003
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 37 0.003
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 37 0.003
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 37 0.003
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 36 0.004
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 36 0.006
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 36 0.006
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 34 0.014
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 34 0.014
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 34 0.018
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 34 0.018
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 34 0.018
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 34 0.018
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 33 0.024
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 33 0.024
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 33 0.032
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 33 0.032
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 33 0.032
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.042
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.042
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 32 0.055
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 32 0.055
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 32 0.055
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 32 0.073
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 31 0.096
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 31 0.096
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 31 0.17
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 31 0.17
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 31 0.17
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 30 0.22
U28928-13|AAL16321.1| 339|Caenorhabditis elegans Hypothetical p... 30 0.29
U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical p... 30 0.29
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 29 0.39
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 29 0.39
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 29 0.39
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 29 0.39
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 29 0.39
Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical pr... 28 0.90
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 28 0.90
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 28 0.90
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 28 0.90
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 28 0.90
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 28 0.90
Z79603-4|CAB01894.1| 800|Caenorhabditis elegans Hypothetical pr... 27 2.7
U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna bi... 27 2.7
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 2.7
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 26 3.6
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p... 26 4.8
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr... 26 4.8
AF038618-2|AAB92072.1| 487|Caenorhabditis elegans Hypothetical ... 26 4.8
Z81128-10|CAB03395.3| 467|Caenorhabditis elegans Hypothetical p... 25 6.3
Z81033-3|CAD36479.1| 467|Caenorhabditis elegans Hypothetical pr... 25 6.3
Z71185-5|CAA94911.1| 1078|Caenorhabditis elegans Hypothetical pr... 25 6.3
Z70308-9|CAA94346.2| 402|Caenorhabditis elegans Hypothetical pr... 25 6.3
Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical pr... 25 6.3
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 25 6.3
Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical pr... 25 6.3
Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical pr... 25 6.3
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 25 6.3
Z35595-8|CAA84640.1| 540|Caenorhabditis elegans Hypothetical pr... 25 6.3
AL023824-1|CAD36497.1| 467|Caenorhabditis elegans Hypothetical ... 25 6.3
AF487547-1|AAL93258.1| 467|Caenorhabditis elegans ARID DNA bind... 25 6.3
AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein. 25 6.3
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 25 6.3
Z79694-4|CAB01963.1| 398|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z46242-1|CAA86325.2| 396|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z37092-2|CAA85453.1| 555|Caenorhabditis elegans Hypothetical pr... 25 8.4
AF000263-13|AAO21393.1| 695|Caenorhabditis elegans Hypothetical... 25 8.4
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 25 8.4
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 25 8.4
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 25 8.4
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 25 8.4
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 70.5 bits (165), Expect = 2e-13
Identities = 27/63 (42%), Positives = 46/63 (73%)
Frame = +1
Query: 10 NSARGEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKV 189
+ A ++LE FD++G++ VWVA PPGFAF+E++++++AEDA A++G + G +V
Sbjct: 12 SDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRICGVRARV 71
Query: 190 EIS 198
E+S
Sbjct: 72 ELS 74
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 70.5 bits (165), Expect = 2e-13
Identities = 27/63 (42%), Positives = 46/63 (73%)
Frame = +1
Query: 10 NSARGEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKV 189
+ A ++LE FD++G++ VWVA PPGFAF+E++++++AEDA A++G + G +V
Sbjct: 12 SDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRICGVRARV 71
Query: 190 EIS 198
E+S
Sbjct: 72 ELS 74
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 70.5 bits (165), Expect = 2e-13
Identities = 27/63 (42%), Positives = 46/63 (73%)
Frame = +1
Query: 10 NSARGEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKV 189
+ A ++LE FD++G++ VWVA PPGFAF+E++++++AEDA A++G + G +V
Sbjct: 12 SDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRICGVRARV 71
Query: 190 EIS 198
E+S
Sbjct: 72 ELS 74
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 53.6 bits (123), Expect = 2e-08
Identities = 25/68 (36%), Positives = 44/68 (64%)
Frame = +1
Query: 13 SARGEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVE 192
+AR D+ER YGK+N++ + GFAF++FE+ ++AEDAC ++G M G+++++
Sbjct: 12 NARERDVERFLKGYGKINNISMKY---GFAFVDFEDSRDAEDACHDLDGKTMEGSSMRLV 68
Query: 193 ISRKRDGP 216
+ R P
Sbjct: 69 VEMARGKP 76
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 53.6 bits (123), Expect = 2e-08
Identities = 25/68 (36%), Positives = 44/68 (64%)
Frame = +1
Query: 13 SARGEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVE 192
+AR D+ER YGK+N++ + GFAF++FE+ ++AEDAC ++G M G+++++
Sbjct: 12 NARERDVERFLKGYGKINNISMKY---GFAFVDFEDSRDAEDACHDLDGKTMEGSSMRLV 68
Query: 193 ISRKRDGP 216
+ R P
Sbjct: 69 VEMARGKP 76
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 53.6 bits (123), Expect = 2e-08
Identities = 25/68 (36%), Positives = 44/68 (64%)
Frame = +1
Query: 13 SARGEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVE 192
+AR D+ER YGK+N++ + GFAF++FE+ ++AEDAC ++G M G+++++
Sbjct: 12 NARERDVERFLKGYGKINNISMKY---GFAFVDFEDSRDAEDACHDLDGKTMEGSSMRLV 68
Query: 193 ISRKRDGP 216
+ R P
Sbjct: 69 VEMARGKP 76
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 49.2 bits (112), Expect = 4e-07
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +1
Query: 19 RGEDLEREFDKYGKLNSVWVALNP-PGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEI 195
R +++E F KYG++ V + P FAF+EFE+ ++AEDA A +G E G ++VE
Sbjct: 21 REKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEF 80
Query: 196 SR 201
+R
Sbjct: 81 TR 82
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 49.2 bits (112), Expect = 4e-07
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +1
Query: 19 RGEDLEREFDKYGKLNSVWVALNP-PGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEI 195
R +++E F KYG++ V + P FAF+EFE+ ++AEDA A +G E G ++VE
Sbjct: 21 REKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEF 80
Query: 196 SR 201
+R
Sbjct: 81 TR 82
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 47.6 bits (108), Expect = 1e-06
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +1
Query: 31 LEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEI 195
+E F G + S+W+A PPGFAF+ F+ A DA +NG ++ KVE+
Sbjct: 44 IEAVFSVMGPIKSIWMAKRPPGFAFVTFKRTVHAFDAVKYLNGKKICDLEAKVEM 98
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 47.6 bits (108), Expect = 1e-06
Identities = 24/68 (35%), Positives = 40/68 (58%)
Frame = +1
Query: 10 NSARGEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKV 189
N A D+E F YGKL+ V + GF F++F++ ++A+DA +NG E+ G + +
Sbjct: 11 NRASDRDVEHFFRGYGKLSDV---IMKNGFGFVDFQDQRDADDAVHDLNGKELCGERVIL 67
Query: 190 EISRKRDG 213
E R++ G
Sbjct: 68 EFPRRKVG 75
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 44.4 bits (100), Expect = 1e-05
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRK 204
+D+E F YG++ V L GF F+EF++ ++AEDA +NG E+ G + ++ S+
Sbjct: 17 KDIEHFFRGYGQIRDV---LLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYSKP 73
Query: 205 RDG 213
R G
Sbjct: 74 RGG 76
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 44.4 bits (100), Expect = 1e-05
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRK 204
+D+E F YG++ V L GF F+EF++ ++AEDA +NG E+ G + ++ S+
Sbjct: 17 KDIEHFFRGYGQIRDV---LLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYSKP 73
Query: 205 RDG 213
R G
Sbjct: 74 RGG 76
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 44.4 bits (100), Expect = 1e-05
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRK 204
+D+E F YG++ V L GF F+EF++ ++AEDA +NG E+ G + ++ S+
Sbjct: 17 KDIEHFFRGYGQIRDV---LLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYSKP 73
Query: 205 RDG 213
R G
Sbjct: 74 RGG 76
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 41.9 bits (94), Expect = 7e-05
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDACSAMNGIEMLGATLKV 189
E+L F G++N+V + + P GFAFIEF A+ A MNG E G L+V
Sbjct: 19 EELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQMNGAEFNGRPLRV 78
Query: 190 EISRK 204
++ K
Sbjct: 79 NLANK 83
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 39.9 bits (89), Expect = 3e-04
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Frame = +1
Query: 16 ARGEDLEREFDKYGKLNSVWVALNP-----PGFAFIEFENLQEAEDACSAMNGIEMLGAT 180
A +D+ +F +YGK+ ++ + L+ G+A +E+E +EA +A N ++LG
Sbjct: 66 ATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQSNDTDLLGQN 125
Query: 181 LKVE 192
+KV+
Sbjct: 126 VKVD 129
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 39.9 bits (89), Expect = 3e-04
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +1
Query: 31 LEREFDKYGKLNSVWV----ALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEIS 198
L REF+ YGK+ + + A P G+AFIE+ + E A +GI++ G L V+
Sbjct: 120 LRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKADGIKVDGKRLVVDYE 179
Query: 199 RKR 207
R R
Sbjct: 180 RGR 182
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 39.1 bits (87), Expect = 5e-04
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDACSAMNGIEMLGATLKV 189
+DL F + G +++V + + P GFAF+EF A+ A NG++ G L+V
Sbjct: 18 DDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFNGVDFNGRALRV 77
Query: 190 EISRKRD 210
+++ R+
Sbjct: 78 NLAQNRN 84
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 39.1 bits (87), Expect = 5e-04
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDACSAMNGIEMLGATLKV 189
++L F K G++ +++A + P GFAF+ FE+ +A A + +N I M LKV
Sbjct: 190 DELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELNDIRMYHMVLKV 249
Query: 190 EISR 201
E +R
Sbjct: 250 EWTR 253
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 39.1 bits (87), Expect = 5e-04
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVAL---NPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEI 195
E LE+ F K+G + S V GF F+ F N +EAE A A++ + G LK+ +
Sbjct: 227 ETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHV 286
Query: 196 SR 201
R
Sbjct: 287 CR 288
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 38.7 bits (86), Expect = 6e-04
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 97 FAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKRDGP 216
F F+ +EN Q A +A SAMNG ++ LKV++ R P
Sbjct: 378 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 417
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 38.7 bits (86), Expect = 6e-04
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 97 FAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKRDGP 216
F F+ +EN Q A +A SAMNG ++ LKV++ R P
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 581
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 38.7 bits (86), Expect = 6e-04
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 97 FAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKRDGP 216
F F+ +EN Q A +A SAMNG ++ LKV++ R P
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 581
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 38.7 bits (86), Expect = 6e-04
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 97 FAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKRDGP 216
F F+ +EN Q A +A SAMNG ++ LKV++ R P
Sbjct: 471 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 510
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 38.7 bits (86), Expect = 6e-04
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 97 FAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKRDGP 216
F F+ +EN Q A +A SAMNG ++ LKV++ R P
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 581
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 38.7 bits (86), Expect = 6e-04
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVAL---NPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEI 195
E LE+ F K+G + S V GF F+ F N +EAE A A++ + G LK+ +
Sbjct: 167 ETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHV 226
Query: 196 SR 201
R
Sbjct: 227 CR 228
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 38.7 bits (86), Expect = 6e-04
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVAL---NPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEI 195
E LE+ F K+G + S V GF F+ F N +EAE A A++ + G LK+ +
Sbjct: 164 ETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHV 223
Query: 196 SR 201
R
Sbjct: 224 CR 225
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 38.7 bits (86), Expect = 6e-04
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVAL---NPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEI 195
E LE+ F K+G + S V GF F+ F N +EAE A A++ + G LK+ +
Sbjct: 227 ETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHV 286
Query: 196 SR 201
R
Sbjct: 287 CR 288
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 37.1 bits (82), Expect = 0.002
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 88 PPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVE 192
P G+ FIEF ++Q AE A +NG E+ G L+V+
Sbjct: 58 PKGYGFIEFPDIQTAEVAIRNLNGYELSGRILRVD 92
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 36.7 bits (81), Expect = 0.003
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 94 GFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKRD 210
GFA++ FEN Q+ A S +NG + LKV +++RD
Sbjct: 54 GFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRAQQRD 92
>U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 2 protein.
Length = 206
Score = 36.7 bits (81), Expect = 0.003
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 10 NSARGEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGA-TLK 186
+SA E LE F+++ L + + N PG AF+EF+ A A + +N ++ T++
Sbjct: 141 DSATAEMLEIMFNQFAGLKDIRMVPNRPGIAFVEFDTDSLAIPARTTLNNFKISAEHTMR 200
Query: 187 VEISRK 204
V+ ++K
Sbjct: 201 VDYAKK 206
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 36.7 bits (81), Expect = 0.003
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 22 GED-LEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEIS 198
GED + R FD++G +N V G+AF++FE + A A MN ++ G ++
Sbjct: 267 GEDEIRRAFDRFGPINEVRT-FKIQGYAFVKFETKESAARAIVQMNNADIGGQIVRCSWG 325
Query: 199 RKRD 210
+ D
Sbjct: 326 KSGD 329
Score = 27.5 bits (58), Expect = 1.6
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 58 KLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKV 189
K ++ LN P +AF+EF + +A A + NG E+L + V
Sbjct: 68 KAKIIFEGLNDP-YAFVEFSDHNQATLALQSHNGRELLEKEMHV 110
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 36.7 bits (81), Expect = 0.003
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +1
Query: 43 FDKYGKLNSVWVALNPP----GFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKRD 210
F+ +G++ + + ++ GFA I F N +A+ +C +N E+ G +++ I ++
Sbjct: 147 FESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQLNNFELAGRCIRLSIKQESQ 206
Query: 211 GP 216
P
Sbjct: 207 AP 208
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 36.7 bits (81), Expect = 0.003
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +1
Query: 43 FDKYGKLNSVWVALNPP----GFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKRD 210
F+ +G++ + + ++ GFA I F N +A+ +C +N E+ G +++ I ++
Sbjct: 292 FESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQLNNFELAGRCIRLSIKQESQ 351
Query: 211 GP 216
P
Sbjct: 352 AP 353
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 35.9 bits (79), Expect = 0.004
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDACSAMNGIEMLGATLKV 189
E++ F G +N+V + + P GFAF+EF A+ A +NG+ G L+V
Sbjct: 20 EEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLNGVAFNGRNLRV 79
Query: 190 EISRK 204
+ K
Sbjct: 80 NYANK 84
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 35.5 bits (78), Expect = 0.006
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +1
Query: 19 RGEDLEREFDKYGKLNSVWVALN---PPGFAFIEFENLQEAEDACSAMNGIEMLGATLKV 189
R DL+ F+K+G ++ V + N GF F+ E Q+AE A ++G + G ++V
Sbjct: 165 RDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEV 224
Query: 190 EISRKR 207
+ R
Sbjct: 225 NCATAR 230
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 35.5 bits (78), Expect = 0.006
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +1
Query: 19 RGEDLEREFDKYGKLNSVWVALN---PPGFAFIEFENLQEAEDACSAMNGIEMLGATLKV 189
R DL+ F+K+G ++ V + N GF F+ E Q+AE A ++G + G ++V
Sbjct: 165 RDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEV 224
Query: 190 EISRKR 207
+ R
Sbjct: 225 NCATAR 230
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 34.3 bits (75), Expect = 0.014
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +1
Query: 97 FAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKRD 210
F F+ ++N+ ++ A +AMNG ++ LKV++ R R+
Sbjct: 472 FGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQLKRPRN 509
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 34.3 bits (75), Expect = 0.014
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +1
Query: 97 FAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKRD 210
F F+ ++N+ ++ A +AMNG ++ LKV++ R R+
Sbjct: 472 FGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQLKRPRN 509
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 33.9 bits (74), Expect = 0.018
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 94 GFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISR 201
GF F+EF+ ++A A MN E+ G T++V +R
Sbjct: 53 GFGFVEFDMAEDAAMAIDNMNESELFGKTIRVNFAR 88
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 33.9 bits (74), Expect = 0.018
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +1
Query: 19 RGEDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDACSAMNGIEMLGATL 183
R + L R FD +G + S+ ++ +P FAF+E+E + A A +MNG + G L
Sbjct: 114 REDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNL 173
Query: 184 KV 189
KV
Sbjct: 174 KV 175
Score = 31.5 bits (68), Expect = 0.096
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 28 DLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDACSAMNGIEMLGATLK 186
DL+ F+ +G++ +A P G F ++EF NL +A + MN ++ G L+
Sbjct: 222 DLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYLR 279
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 33.9 bits (74), Expect = 0.018
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +1
Query: 19 RGEDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDACSAMNGIEMLGATL 183
R + L R FD +G + S+ ++ +P FAF+E+E + A A +MNG + G L
Sbjct: 114 REDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNL 173
Query: 184 KV 189
KV
Sbjct: 174 KV 175
Score = 33.1 bits (72), Expect = 0.032
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +1
Query: 28 DLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDACSAMNGIEMLGATLKV 189
DL+ F+ +G++ +A P G F ++EF NL +A + MN ++ G L+V
Sbjct: 222 DLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYLRV 280
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 33.9 bits (74), Expect = 0.018
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +1
Query: 19 RGEDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDACSAMNGIEMLGATL 183
R + L R FD +G + S+ ++ +P FAF+E+E + A A +MNG + G L
Sbjct: 114 REDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNL 173
Query: 184 KV 189
KV
Sbjct: 174 KV 175
Score = 33.1 bits (72), Expect = 0.032
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +1
Query: 28 DLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDACSAMNGIEMLGATLKV 189
DL+ F+ +G++ +A P G F ++EF NL +A + MN ++ G L+V
Sbjct: 222 DLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYLRV 280
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 33.5 bits (73), Expect = 0.024
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +1
Query: 19 RGEDLEREFDKYGKLNSVWVALNP---PGFAFIEFENLQEAEDACSAMNGIEMLGATLKV 189
R DL F+K G + V + N GF F+ +N +A+ A + NG + G ++V
Sbjct: 112 REPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEV 171
Query: 190 EISRKR 207
++ +R
Sbjct: 172 NLATQR 177
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 33.5 bits (73), Expect = 0.024
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +1
Query: 19 RGEDLEREFDKYGKLNSVWVALNP---PGFAFIEFENLQEAEDACSAMNGIEMLGATLKV 189
R DL F+K G + V + N GF F+ +N +A+ A + NG + G ++V
Sbjct: 112 REPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEV 171
Query: 190 EISRKR 207
++ +R
Sbjct: 172 NLATQR 177
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.032
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDACSAMNGIEMLGATLKV 189
EDLE F ++GK+N+ + + +AFIEF+N + E A M+ + + + V
Sbjct: 255 EDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHV 314
Query: 190 EISR 201
+ S+
Sbjct: 315 DFSQ 318
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.032
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDACSAMNGIEMLGATLKV 189
EDLE F ++GK+N+ + + +AFIEF+N + E A M+ + + + V
Sbjct: 255 EDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHV 314
Query: 190 EISR 201
+ S+
Sbjct: 315 DFSQ 318
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 33.1 bits (72), Expect = 0.032
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDACSAMNGIEMLGATLKV 189
EDLE F ++GK+N+ + + +AFIEF+N + E A M+ + + + V
Sbjct: 186 EDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHV 245
Query: 190 EISR 201
+ S+
Sbjct: 246 DFSQ 249
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.042
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 94 GFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKRD 210
GFAFI F + + ++ A AMNG + + V + KRD
Sbjct: 143 GFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRD 181
Score = 31.5 bits (68), Expect = 0.096
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 76 VALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKV 189
V N GF F+EF ++A+ A +N I++ G +KV
Sbjct: 49 VTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKV 86
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.042
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 94 GFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKRD 210
GFAFI F + + ++ A AMNG + + V + KRD
Sbjct: 153 GFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRD 191
Score = 31.5 bits (68), Expect = 0.096
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 76 VALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKV 189
V N GF F+EF ++A+ A +N I++ G +KV
Sbjct: 59 VTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKV 96
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 32.3 bits (70), Expect = 0.055
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +1
Query: 13 SARGEDLEREFDKYGKLNSVWVALN---PPGFAFIEFENLQEAEDACSAMNGIEMLGATL 183
S R +DL F YG++ SV + N GF F+ ++++ E A +A++ + G +
Sbjct: 61 SFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAALHESHVQGRII 120
Query: 184 KV 189
+V
Sbjct: 121 EV 122
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 32.3 bits (70), Expect = 0.055
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEIS 198
+D+ F +GK+ +V GF F++F A+++C ++NG+ L V ++
Sbjct: 98 DDIIELFRPFGKIIAVNYFAQQ-GFGFVQFNEAGSADESCRSLNGMSWKACCLDVHLA 154
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 32.3 bits (70), Expect = 0.055
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +1
Query: 13 SARGEDLEREFDKYGKLNSVWVALN---PPGFAFIEFENLQEAEDACSAMNGIEMLGATL 183
S R +DL F YG++ SV + N GF F+ ++++ E A +A++ + G +
Sbjct: 61 SFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAALHESHVQGRII 120
Query: 184 KV 189
+V
Sbjct: 121 EV 122
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 31.9 bits (69), Expect = 0.073
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 94 GFAFIEFENLQEAEDACSAMNGIEMLGATLKV 189
G+AF+ N EA +A ++NG + G TL+V
Sbjct: 415 GYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQV 446
Score = 28.7 bits (61), Expect = 0.68
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 94 GFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISR 201
G+ F+ + ++A A S+ NG+ + T+KV +R
Sbjct: 84 GYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYAR 119
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 31.5 bits (68), Expect = 0.096
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +1
Query: 13 SARGEDLEREFDKYGKLNSVWVALNPP-----GFAFIEFENLQEAEDACSAMNGIEMLGA 177
+ + +DL+ F KYG+++ V V ++ GFA +EF + A A SA++G G
Sbjct: 289 ATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSALDGYVFKGR 348
Query: 178 TLKV 189
+ +
Sbjct: 349 MMHI 352
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 31.5 bits (68), Expect = 0.096
Identities = 11/35 (31%), Positives = 25/35 (71%)
Frame = +1
Query: 94 GFAFIEFENLQEAEDACSAMNGIEMLGATLKVEIS 198
G+ ++E++NL++AE + M+G ++ G + VE++
Sbjct: 176 GYGYVEYDNLEDAEKSIKHMDGGQIDGMAVHVEMT 210
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 30.7 bits (66), Expect = 0.17
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +1
Query: 28 DLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKR 207
DL F YG + V + +AF+ +E + A A MNG EM G ++ R +
Sbjct: 252 DLRDLFSTYGDIAEVRI-FKTQRYAFVRYEKKECATKAIMEMNGKEMAGNQVRCSWGRTQ 310
Query: 208 DGP 216
P
Sbjct: 311 AVP 313
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 30.7 bits (66), Expect = 0.17
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVALN----PPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVE 192
E L F K+G++ S V + P GF F+ F + A A +N + G K+
Sbjct: 252 EKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLS 311
Query: 193 ISR 201
+ R
Sbjct: 312 VCR 314
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 30.7 bits (66), Expect = 0.17
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVALN----PPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVE 192
E L F K+G++ S V + P GF F+ F + A A +N + G K+
Sbjct: 252 EKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLS 311
Query: 193 ISR 201
+ R
Sbjct: 312 VCR 314
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 30.3 bits (65), Expect = 0.22
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 43 FDKYGKLNSVWVALNP---PGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKR 207
F+K G + V + N GF F+ +N +A+ A + NG + G ++V ++ +R
Sbjct: 2 FEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 59
>U28928-13|AAL16321.1| 339|Caenorhabditis elegans Hypothetical
protein C44B7.2b protein.
Length = 339
Score = 29.9 bits (64), Expect = 0.29
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +1
Query: 100 AFIEFENLQEAEDACSAMNGIEMLG--ATLKVEISR 201
A +EFE+++ A+ A AMNG ++ TLKVE ++
Sbjct: 163 ALVEFESMEVAKAAKHAMNGADIYSGCCTLKVEFAK 198
>U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical
protein C44B7.2a protein.
Length = 597
Score = 29.9 bits (64), Expect = 0.29
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +1
Query: 100 AFIEFENLQEAEDACSAMNGIEMLG--ATLKVEISR 201
A +EFE+++ A+ A AMNG ++ TLKVE ++
Sbjct: 163 ALVEFESMEVAKAAKHAMNGADIYSGCCTLKVEFAK 198
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 29.5 bits (63), Expect = 0.39
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 16 ARGEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDACSAMNGIEMLGAT 180
A E++E+ F G ++ V + + P GFA++EF + ++A AM + G
Sbjct: 89 ATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNAL-AMTDSLLRGRQ 147
Query: 181 LKVEISR 201
+KV+ R
Sbjct: 148 IKVDPKR 154
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 29.5 bits (63), Expect = 0.39
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRK 204
+++ + F +G++ V + G+AF++F+N A A MN ++ G ++ +
Sbjct: 141 DEIRQGFASFGRITEVRI-FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGKT 199
Query: 205 RD 210
D
Sbjct: 200 GD 201
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 94 GFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKRDG 213
G+ F+ + +EAE A MNG + T++ + ++ G
Sbjct: 64 GYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPG 103
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 29.5 bits (63), Expect = 0.39
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRK 204
+++ + F +G++ V + G+AF++F+N A A MN ++ G ++ +
Sbjct: 151 DEIRQGFASFGRITEVRI-FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGKT 209
Query: 205 RD 210
D
Sbjct: 210 GD 211
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 94 GFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKRDG 213
G+ F+ + +EAE A MNG + T++ + ++ G
Sbjct: 74 GYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPG 113
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 29.5 bits (63), Expect = 0.39
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRK 204
+++ + F +G++ V + G+AF++F+N A A MN ++ G ++ +
Sbjct: 254 DEIRQGFASFGRITEVRI-FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGKT 312
Query: 205 RD 210
D
Sbjct: 313 GD 314
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 94 GFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKRDG 213
G+ F+ + +EAE A MNG + T++ + ++ G
Sbjct: 177 GYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPG 216
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 29.5 bits (63), Expect = 0.39
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRK 204
+++ + F +G++ V + G+AF++F+N A A MN ++ G ++ +
Sbjct: 222 DEIRQGFASFGRITEVRI-FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGKT 280
Query: 205 RD 210
D
Sbjct: 281 GD 282
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 94 GFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKRDG 213
G+ F+ + +EAE A MNG + T++ + ++ G
Sbjct: 145 GYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPG 184
>Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical
protein F12F6.5 protein.
Length = 1059
Score = 28.3 bits (60), Expect = 0.90
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -1
Query: 212 PSRFLEI-STLRVAPNISMPFMALHASSASCKFSNSMNAKPGGFNATHTEFNFPYLSNSR 36
PSR + I ST A I + L S A+ N ++ G ++TH E ++ +++SR
Sbjct: 758 PSRHMMIDSTYESADRILLSSPIL--SQANTSTPNGISPSNGAESSTHNEIDYAPIASSR 815
Query: 35 SRSSPRA 15
S + +A
Sbjct: 816 SSNRSKA 822
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 28.3 bits (60), Expect = 0.90
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Frame = +1
Query: 85 NPPGFAFIEFENLQEAEDACSAMNGIEM----LGAT-LKVEISRK--RDGP 216
N G+A++ F+N AE A +MNG M LG T +K E+ K R GP
Sbjct: 71 NHKGWAYVGFDNKAVAEIAAESMNGYLMFEQRLGCTVMKPELIPKAMRHGP 121
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 28.3 bits (60), Expect = 0.90
Identities = 11/45 (24%), Positives = 27/45 (60%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNG 159
E L++ F ++G + ++ P +A++ +EN +++AC ++ G
Sbjct: 265 EILQKAFGEFGFVENIDYDHGQP-YAYVVYENTHTSQEACRSLRG 308
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 28.3 bits (60), Expect = 0.90
Identities = 11/45 (24%), Positives = 27/45 (60%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNG 159
E L++ F ++G + ++ P +A++ +EN +++AC ++ G
Sbjct: 265 EILQKAFGEFGFVENIDYDHGQP-YAYVVYENTHTSQEACRSLRG 308
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 28.3 bits (60), Expect = 0.90
Identities = 11/45 (24%), Positives = 27/45 (60%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNG 159
E L++ F ++G + ++ P +A++ +EN +++AC ++ G
Sbjct: 242 EILQKAFGEFGFVENIDYDHGQP-YAYVVYENTHTSQEACRSLRG 285
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 28.3 bits (60), Expect = 0.90
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 25 EDLEREFDKYGKLNSVWVA--LNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKV 189
E++ F K+G + + V G AF+ +E++ +A+ AC ++G + L V
Sbjct: 33 EEMYEIFGKFGAVRQIRVGNTAETRGTAFVVYEDIFDAKTACEHLSGYNVSNRYLVV 89
>Z79603-4|CAB01894.1| 800|Caenorhabditis elegans Hypothetical
protein M163.4 protein.
Length = 800
Score = 26.6 bits (56), Expect = 2.7
Identities = 13/54 (24%), Positives = 24/54 (44%)
Frame = +1
Query: 1 CCMNSARGEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGI 162
CC++S +L E D YGK+ + + + I ++ + E C N +
Sbjct: 416 CCLSSEEDFELVAEMDSYGKMLMLMKIIAEGNYKLI-YDRVAETGITCPVGNDL 468
>U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 3 protein.
Length = 217
Score = 26.6 bits (56), Expect = 2.7
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +1
Query: 4 CMNSARG---EDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEM 168
C N G E ++ F ++ L V N FAFIE+E+ +E A A++ +
Sbjct: 147 CSNIPEGTEPEQIQTIFSQFPGLREVRWMPNTKDFAFIEYESEDLSEPARQALDNFRI 204
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 26.6 bits (56), Expect = 2.7
Identities = 15/50 (30%), Positives = 19/50 (38%)
Frame = +1
Query: 67 SVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKRDGP 216
S+ A P FEN A A S M + G T + S+ GP
Sbjct: 1004 SISAATTTPNVVVDAFENSSPAAPAVSTMEEVTPSGTTASISQSQPTPGP 1053
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 26.2 bits (55), Expect = 3.6
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +1
Query: 16 ARGEDLEREFDKYGKLNSVWVALN----PPGFAFIEFENLQEAEDACSAMNGIEMLGATL 183
A ++L+ F K+G + SV + P G AF++F+ A+ ++ + + + L
Sbjct: 694 ATDDELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDFDTEASAQKCVASGDKLMLREREL 753
Query: 184 KVEIS 198
+V +S
Sbjct: 754 EVALS 758
>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
protein F02E9.4b protein.
Length = 1507
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 7 MNSARGEDLEREFDKYGK-LNSVWVALNPPGFAFIEFEN 120
MN+ R ED+E +YG+ V N F F+E +N
Sbjct: 1302 MNAERDEDMESVIQEYGQTAEEVLRGKNTYRFEFVEEQN 1340
>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical protein
F02E9.4a protein.
Length = 1505
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 7 MNSARGEDLEREFDKYGK-LNSVWVALNPPGFAFIEFEN 120
MN+ R ED+E +YG+ V N F F+E +N
Sbjct: 1300 MNAERDEDMESVIQEYGQTAEEVLRGKNTYRFEFVEEQN 1338
>AF038618-2|AAB92072.1| 487|Caenorhabditis elegans Hypothetical
protein F42G8.8 protein.
Length = 487
Score = 25.8 bits (54), Expect = 4.8
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +1
Query: 88 PPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVE 192
P GF F + L A MN + GATLKVE
Sbjct: 277 PEGFKFFADQKLLTIFSAPRYMNETDNHGATLKVE 311
>Z81128-10|CAB03395.3| 467|Caenorhabditis elegans Hypothetical
protein T23D8.8 protein.
Length = 467
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 182 RVAPNISMPFMALHASSASCKFSNS 108
R AP+ +PF HA+SA+ N+
Sbjct: 296 RTAPSFPLPFQLPHAASAAATMLNN 320
>Z81033-3|CAD36479.1| 467|Caenorhabditis elegans Hypothetical
protein T23D8.8 protein.
Length = 467
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 182 RVAPNISMPFMALHASSASCKFSNS 108
R AP+ +PF HA+SA+ N+
Sbjct: 296 RTAPSFPLPFQLPHAASAAATMLNN 320
>Z71185-5|CAA94911.1| 1078|Caenorhabditis elegans Hypothetical
protein C35A5.8 protein.
Length = 1078
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = -2
Query: 151 WRYTHPPPLASFRIQ*MQNQGDLMLPILSLIFHIYQTPARDLPLVPNSCS 2
W Y + F ++ D++ PIL L+ + Q + L +SCS
Sbjct: 733 WMYPEVFNIMQFSVEKWPGCADVVTPILRLLSEMVQNRQQRLKFEMSSCS 782
>Z70308-9|CAA94346.2| 402|Caenorhabditis elegans Hypothetical
protein F49E11.7 protein.
Length = 402
Score = 25.4 bits (53), Expect = 6.3
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 88 PPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRK 204
P GF F + L A MN + GATL+VE K
Sbjct: 296 PEGFKFFADQKLLTIFSAPRYMNETDNHGATLRVETDGK 334
>Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical
protein C09D8.1b protein.
Length = 1467
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +1
Query: 46 DKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRK 204
++YG ++ W+ L P ++ + NL E + L +L V S+K
Sbjct: 581 EEYGPISHYWIILVPANYSTEDVVNLDPIELEKATAEKRAQLARSLSVSPSKK 633
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +1
Query: 46 DKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRK 204
++YG ++ W+ L P ++ + NL E + L +L V S+K
Sbjct: 1294 EEYGPISHYWIILVPANYSTEDVVNLDPIELEKATAEKRAQLARSLSVSPSKK 1346
>Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical
protein C09D8.1c protein.
Length = 1216
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +1
Query: 46 DKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRK 204
++YG ++ W+ L P ++ + NL E + L +L V S+K
Sbjct: 330 EEYGPISHYWIILVPANYSTEDVVNLDPIELEKATAEKRAQLARSLSVSPSKK 382
>Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical
protein C09D8.1b protein.
Length = 1467
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +1
Query: 46 DKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRK 204
++YG ++ W+ L P ++ + NL E + L +L V S+K
Sbjct: 581 EEYGPISHYWIILVPANYSTEDVVNLDPIELEKATAEKRAQLARSLSVSPSKK 633
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +1
Query: 46 DKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRK 204
++YG ++ W+ L P ++ + NL E + L +L V S+K
Sbjct: 1294 EEYGPISHYWIILVPANYSTEDVVNLDPIELEKATAEKRAQLARSLSVSPSKK 1346
>Z35595-8|CAA84640.1| 540|Caenorhabditis elegans Hypothetical
protein C01G6.7 protein.
Length = 540
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/54 (24%), Positives = 23/54 (42%)
Frame = -1
Query: 197 EISTLRVAPNISMPFMALHASSASCKFSNSMNAKPGGFNATHTEFNFPYLSNSR 36
++ T R+ N+ MP + +S+ KP G +H F+ S+ R
Sbjct: 159 DVLTSRLVRNLKMPLIDPKNDIVFLPYSSGTTGKPKGVMISHLNFSMMLESSLR 212
>AL023824-1|CAD36497.1| 467|Caenorhabditis elegans Hypothetical
protein T23D8.8 protein.
Length = 467
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 182 RVAPNISMPFMALHASSASCKFSNS 108
R AP+ +PF HA+SA+ N+
Sbjct: 296 RTAPSFPLPFQLPHAASAAATMLNN 320
>AF487547-1|AAL93258.1| 467|Caenorhabditis elegans ARID DNA binding
protein CFI-1 protein.
Length = 467
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 182 RVAPNISMPFMALHASSASCKFSNS 108
R AP+ +PF HA+SA+ N+
Sbjct: 296 RTAPSFPLPFQLPHAASAAATMLNN 320
>AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein.
Length = 1487
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +1
Query: 46 DKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRK 204
++YG ++ W+ L P ++ + NL E + L +L V S+K
Sbjct: 601 EEYGPISHYWIILVPANYSTEDVVNLDPIELEKATAEKRAQLARSLSVSPSKK 653
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +1
Query: 46 DKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRK 204
++YG ++ W+ L P ++ + NL E + L +L V S+K
Sbjct: 1314 EEYGPISHYWIILVPANYSTEDVVNLDPIELEKATAEKRAQLARSLSVSPSKK 1366
>Z79694-4|CAB01963.1| 398|Caenorhabditis elegans Hypothetical
protein C15A11.4 protein.
Length = 398
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -2
Query: 100 QNQGDLMLPILSLIFHIYQTPARDLPLVPNS 8
+ G + P+++LI H+ + ARD L+ S
Sbjct: 113 EGAGAVAFPVMTLILHLAPSIARDFSLMGQS 143
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 58 KLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLG 174
K+ V+V G+ FIEF EA +NG + G
Sbjct: 97 KVKRVYVKDELKGYCFIEFITFDEARQTLYDLNGNRIPG 135
>Z46242-1|CAA86325.2| 396|Caenorhabditis elegans Hypothetical
protein F35G12.2 protein.
Length = 396
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 88 PPGFAFIEFENLQEA-EDACSAMNGIEMLGATLKVEISRKRDGP 216
P F + + ++A ED A+ I+ G LK I K D P
Sbjct: 80 PVDFEVVNLTSKEDASEDLAEAITAIKRNGVALKGNIETKFDNP 123
>Z37092-2|CAA85453.1| 555|Caenorhabditis elegans Hypothetical
protein F44F4.2 protein.
Length = 555
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 71 TEFNFPYLSNSRSRSSPRAEF 9
T FN YL+ +RS+ P AEF
Sbjct: 231 TAFNANYLTKARSKMVPCAEF 251
>AF000263-13|AAO21393.1| 695|Caenorhabditis elegans Hypothetical
protein T08B2.5g protein.
Length = 695
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 97 FAFIEFENLQEAEDACSAMNGIEML--GATLKVEISR 201
FAF+EF N + AE + G L G TL VE ++
Sbjct: 40 FAFVEFSNRETAEQWMTDYEGWLTLDDGRTLAVEYAK 76
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 97 FAFIEFENLQEAEDACSAMNGIEML--GATLKVEISR 201
FAF+EF N + AE + G L G TL VE ++
Sbjct: 183 FAFVEFSNRETAEQWMTDYEGWLTLDDGRTLAVEYAK 219
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 97 FAFIEFENLQEAEDACSAMNGIEML--GATLKVEISR 201
FAF+EF N + AE + G L G TL VE ++
Sbjct: 211 FAFVEFSNRETAEQWMTDYEGWLTLDDGRTLAVEYAK 247
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 97 FAFIEFENLQEAEDACSAMNGIEML--GATLKVEISR 201
FAF+EF N + AE + G L G TL VE ++
Sbjct: 269 FAFVEFSNRETAEQWMTDYEGWLTLDDGRTLAVEYAK 305
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 97 FAFIEFENLQEAEDACSAMNGIEML--GATLKVEISR 201
FAF+EF N + AE + G L G TL VE ++
Sbjct: 270 FAFVEFSNRETAEQWMTDYEGWLTLDDGRTLAVEYAK 306
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.135 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,513,186
Number of Sequences: 27780
Number of extensions: 94611
Number of successful extensions: 377
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 365
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 259761072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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