Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_A11
         (281 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   2.2  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   2.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   2.9  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   3.8  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        20   5.0  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    20   6.7  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    20   6.7  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     20   6.7  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 155 FMALHASSASCKFSNSMNAKPGG 87
           F+A     A+C+FS    A+ GG
Sbjct: 458 FLATVVEEAACRFSAVAQAQLGG 480


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 61  LNSVWVALNPPGFAF 105
           L  VW+ + PPG  F
Sbjct: 641 LTLVWMIIEPPGTRF 655


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 61  LNSVWVALNPPGFAF 105
           L  VW+ + PPG  F
Sbjct: 731 LTLVWMIIEPPGTRF 745


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = -1

Query: 77  THTEFNFPYLSNSRSRSSP 21
           ++  FNF +++++ S S+P
Sbjct: 315 SNVPFNFKFITDANSSSTP 333


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +1

Query: 25  EDLEREFDKYGKL 63
           ++ +R F+KYG+L
Sbjct: 183 QEAKRRFEKYGQL 195


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 78  SIKSPWFCIH 107
           SIK PWF  H
Sbjct: 168 SIKDPWFPRH 177


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 34  EREFDKYGK 60
           ERE+ KYGK
Sbjct: 275 EREYRKYGK 283


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -3

Query: 45  KLPLEIFPSCR 13
           K P E FP C+
Sbjct: 146 KFPQEFFPECK 156


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.135    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,073
Number of Sequences: 438
Number of extensions: 967
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5494764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)