Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_A10
(179 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99283-6|CAB16539.2| 556|Caenorhabditis elegans Hypothetical pr... 29 0.58
AC006675-7|AAK84555.2| 409|Caenorhabditis elegans Hypothetical ... 28 1.0
Z70212-10|CAA94169.2| 319|Caenorhabditis elegans Hypothetical p... 26 3.1
Z50177-8|CAA90548.2| 319|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 26 4.1
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z70755-2|CAA94785.1| 220|Caenorhabditis elegans Hypothetical pr... 25 9.4
AC006651-8|AAX22286.1| 716|Caenorhabditis elegans Hypothetical ... 25 9.4
AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical ... 25 9.4
AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical ... 25 9.4
>Z99283-6|CAB16539.2| 556|Caenorhabditis elegans Hypothetical
protein Y70C5C.5 protein.
Length = 556
Score = 28.7 bits (61), Expect = 0.58
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 87 LKKCHEFTIKLCKYALNNLEDFVWD 161
LK CH +T + KY N+ + +WD
Sbjct: 465 LKTCHHWTGGITKYKSYNVPEIIWD 489
>AC006675-7|AAK84555.2| 409|Caenorhabditis elegans Hypothetical
protein M02H5.5 protein.
Length = 409
Score = 27.9 bits (59), Expect = 1.0
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 81 EHLKK-CHEFTIKLCKYALNNLEDFVWDNYANH 176
EH+KK C FT + + + L D + D Y NH
Sbjct: 323 EHIKKSCDRFTQETVEQLQDTLSDHLHDYYINH 355
>Z70212-10|CAA94169.2| 319|Caenorhabditis elegans Hypothetical
protein R04D3.10 protein.
Length = 319
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -3
Query: 156 KQSLLGYLKRIYIVLL*IHGISLNVPHYTVCITVFAL 46
++ L GY I IV+L ISL +P++T C +F L
Sbjct: 120 QRRLFGYAAVIAIVVL----ISLLIPYFTPCRIIFML 152
>Z50177-8|CAA90548.2| 319|Caenorhabditis elegans Hypothetical
protein R04D3.10 protein.
Length = 319
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -3
Query: 156 KQSLLGYLKRIYIVLL*IHGISLNVPHYTVCITVFAL 46
++ L GY I IV+L ISL +P++T C +F L
Sbjct: 120 QRRLFGYAAVIAIVVL----ISLLIPYFTPCRIIFML 152
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 163 LSQTKSSRLFKAYLHSFIVNSWHFFKCSSLYCMYYCVRTRAESXF 29
L + LF +LHS +V ++ C C+Y +T A + F
Sbjct: 497 LPEGYKKHLFDGHLHSSLVFAYCPKNCHGQLCLYTPPKTAASTYF 541
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 163 LSQTKSSRLFKAYLHSFIVNSWHFFKCSSLYCMYYCVRTRAESXF 29
L + LF +LHS +V ++ C C+Y +T A + F
Sbjct: 497 LPEGYKKHLFDGHLHSSLVFAYCPKNCHGQLCLYTPPKTAASTYF 541
>Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical
protein C31E10.8 protein.
Length = 1272
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 139 LFKAYLHSFIVNSWHFFKCSSLYCMYYCVRTR 44
+F HS ++ WH C+ LY + + +TR
Sbjct: 869 IFLTTNHSTLIQLWHDTACNLLYDISFDHKTR 900
>Z70755-2|CAA94785.1| 220|Caenorhabditis elegans Hypothetical
protein K06A4.2 protein.
Length = 220
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 106 NSWHFFKCSSLYCMYYCVRTRAESXFT 26
NSW F+K + +YY V FT
Sbjct: 80 NSWRFYKKFKSFDLYYLVARMFADIFT 106
>AC006651-8|AAX22286.1| 716|Caenorhabditis elegans Hypothetical
protein H06I04.3b protein.
Length = 716
Score = 24.6 bits (51), Expect = 9.4
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 129 ALNNLEDFVWDNYANH 176
A NLED W+ YAN+
Sbjct: 646 AARNLEDEAWNRYANN 661
>AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical
protein H06I04.3c protein.
Length = 786
Score = 24.6 bits (51), Expect = 9.4
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 129 ALNNLEDFVWDNYANH 176
A NLED W+ YAN+
Sbjct: 646 AARNLEDEAWNRYANN 661
>AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical
protein H06I04.3a protein.
Length = 833
Score = 24.6 bits (51), Expect = 9.4
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 129 ALNNLEDFVWDNYANH 176
A NLED W+ YAN+
Sbjct: 646 AARNLEDEAWNRYANN 661
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,175,205
Number of Sequences: 27780
Number of extensions: 62153
Number of successful extensions: 188
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 12,740,198
effective HSP length: 40
effective length of database: 11,628,998
effective search space used: 220950962
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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