Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_A09
         (166 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-P...    26   6.1  
BT021227-1|AAX33375.1|  124|Drosophila melanogaster RH43429p pro...    26   8.1  
BT003537-1|AAO39541.1|  506|Drosophila melanogaster RE06930p pro...    26   8.1  
AE014298-2485|AAF48670.1|  480|Drosophila melanogaster CG13005-P...    26   8.1  

>AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-PA
           protein.
          Length = 1895

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 164 HPHRHSWGHRRNWPRRHP 111
           HPH H++ H    P  HP
Sbjct: 716 HPHPHTYAHSHPHPHPHP 733


>BT021227-1|AAX33375.1|  124|Drosophila melanogaster RH43429p
           protein.
          Length = 124

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 17/48 (35%), Positives = 20/48 (41%)
 Frame = -3

Query: 146 WGHRRNWPRRHPFLRRTCLYMSRTAQAWRRNKLGTDPFRLGLEGGCAR 3
           W   R W R   + RR      R  +  RR +     FRLGL G C R
Sbjct: 40  WSRWRRWRRWSRWSRRFERSCQRECRCNRRQQRRRPSFRLGL-GHCNR 86


>BT003537-1|AAO39541.1|  506|Drosophila melanogaster RE06930p
           protein.
          Length = 506

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 10  HPPSSPSLNGSVPSLFLRHA 69
           HPPS+PSL G + +   RH+
Sbjct: 303 HPPSTPSLFGLLTAQLQRHS 322


>AE014298-2485|AAF48670.1|  480|Drosophila melanogaster CG13005-PA
           protein.
          Length = 480

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 10  HPPSSPSLNGSVPSLFLRHA 69
           HPPS+PSL G + +   RH+
Sbjct: 277 HPPSTPSLFGLLTAQLQRHS 296


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,332,935
Number of Sequences: 53049
Number of extensions: 89336
Number of successful extensions: 360
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 358
length of database: 24,988,368
effective HSP length: 35
effective length of database: 23,131,653
effective search space used: 439501407
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)