Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_A07
(264 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 124 5e-29
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 124 5e-29
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 124 5e-29
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 124 5e-29
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 124 5e-29
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 65 3e-11
AK024429-1|BAB15719.1| 1430|Homo sapiens FLJ00018 protein protein. 31 0.66
DQ187654-1|ABA26190.1| 107|Homo sapiens immunoglobulin light ch... 29 3.5
AK127999-1|BAC87224.1| 232|Homo sapiens protein ( Homo sapiens ... 28 6.2
AF202637-1|AAG22491.1| 155|Homo sapiens PP3111 protein. 27 8.2
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 124 bits (299), Expect = 5e-29
Identities = 55/74 (74%), Positives = 68/74 (91%)
Frame = +3
Query: 42 PIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGIYKFSG 221
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLG +F+G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 222 VDIRVTGKGGGHVA 263
VDIRV KGGGHVA
Sbjct: 66 VDIRVRVKGGGHVA 79
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 124 bits (299), Expect = 5e-29
Identities = 55/74 (74%), Positives = 68/74 (91%)
Frame = +3
Query: 42 PIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGIYKFSG 221
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLG +F+G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 222 VDIRVTGKGGGHVA 263
VDIRV KGGGHVA
Sbjct: 66 VDIRVRVKGGGHVA 79
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 124 bits (299), Expect = 5e-29
Identities = 55/74 (74%), Positives = 68/74 (91%)
Frame = +3
Query: 42 PIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGIYKFSG 221
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLG +F+G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 222 VDIRVTGKGGGHVA 263
VDIRV KGGGHVA
Sbjct: 66 VDIRVRVKGGGHVA 79
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 124 bits (299), Expect = 5e-29
Identities = 55/74 (74%), Positives = 68/74 (91%)
Frame = +3
Query: 42 PIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGIYKFSG 221
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLG +F+G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 222 VDIRVTGKGGGHVA 263
VDIRV KGGGHVA
Sbjct: 66 VDIRVRVKGGGHVA 79
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 124 bits (299), Expect = 5e-29
Identities = 55/74 (74%), Positives = 68/74 (91%)
Frame = +3
Query: 42 PIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGIYKFSG 221
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLG +F+G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 222 VDIRVTGKGGGHVA 263
VDIRV KGGGHVA
Sbjct: 66 VDIRVRVKGGGHVA 79
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 65.3 bits (152), Expect = 3e-11
Identities = 33/72 (45%), Positives = 46/72 (63%)
Frame = +3
Query: 45 IQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGIYKFSGV 224
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL + +G+
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 225 DIRVTGKGGGHV 260
DI V KG GHV
Sbjct: 78 DIHVRVKGSGHV 89
>AK024429-1|BAB15719.1| 1430|Homo sapiens FLJ00018 protein protein.
Length = 1430
Score = 31.1 bits (67), Expect = 0.66
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 44 NPSRTSFRP*ENCNCGSILQTRTWSVACKWTPPRPGRTQTSSVQTTGT 187
+PS R E C+CG++ +TRT A PR G ++S+ T G+
Sbjct: 58 SPSLGCGRRGEVCDCGTVCETRTAPAAPTMASPR-GSGSSTSLSTVGS 104
>DQ187654-1|ABA26190.1| 107|Homo sapiens immunoglobulin light chain
variable region protein.
Length = 107
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 183 EPILLLGIYKFSGVDIRVTGKGGG 254
+P++ LG Y+ SGV R +G G G
Sbjct: 46 QPLIYLGYYRASGVPDRFSGSGSG 69
>AK127999-1|BAC87224.1| 232|Homo sapiens protein ( Homo sapiens
cDNA FLJ46117 fis, clone TESTI2037572. ).
Length = 232
Score = 27.9 bits (59), Expect = 6.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 80 CNCGSILQTRTWSVACKW 133
C+CG+ L +TW+ C W
Sbjct: 28 CSCGTQLWLQTWACLCTW 45
>AF202637-1|AAG22491.1| 155|Homo sapiens PP3111 protein.
Length = 155
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -3
Query: 124 RNTPCPRLQYATAVAVFLRPKTCTAWIGSRLA-SCTAASSE 5
R+ P RLQ A FL+P + W G R + SC + S +
Sbjct: 25 RSEPPKRLQTAQVTDCFLKPNWRSLWPGKRPSLSCRSLSQQ 65
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,517,304
Number of Sequences: 237096
Number of extensions: 1033758
Number of successful extensions: 3216
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3216
length of database: 76,859,062
effective HSP length: 65
effective length of database: 61,447,822
effective search space used: 1351852084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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