Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_A07
         (264 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   1.5  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    20   4.5  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    20   4.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   4.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   4.5  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    19   7.8  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    19   7.8  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    19   7.8  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    19   7.8  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -3

Query: 73  LRPKTCTAWIGSRLASCTAA 14
           L P  C +W+   +  CTA+
Sbjct: 106 LGPMLCDSWVSLDILLCTAS 125


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 147 GRGGVHLHATLH 112
           G G  H+HAT H
Sbjct: 420 GHGHSHIHATPH 431


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 58  CTAWIGSRLASCTAA 14
           C  W+   + SCTA+
Sbjct: 114 CDLWVSFDVLSCTAS 128


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 43   QSKPYKFSAVRK 78
            +SKPYKF  + K
Sbjct: 1721 KSKPYKFHCMEK 1732


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = +2

Query: 128  KWTPPRPGRTQTSSVQ 175
            ++TPP+P   Q    Q
Sbjct: 996  RYTPPQPANAQQGQAQ 1011


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = +2

Query: 11  RGCRAGGKT*T----NPSRTSFRP*ENCNCGSILQTRTW 115
           +GC AG +       +P+RT F+  ++ + G    + TW
Sbjct: 399 QGCGAGKENYQTMSRDPARTPFQWDDSVSAGFSSSSNTW 437


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 89  RSCSFLTAENLYGLDWFTSCLLHGSL 12
           + C  +TA  L+G   +   L  GSL
Sbjct: 749 QDCELVTAGELFGRSGYGIGLQKGSL 774


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 10  TRLPCRRQDVNQSKPYKFSAVRKL 81
           TR+P  R +   ++   FS  RKL
Sbjct: 301 TRIPSTRINKQHTRGNNFSLSRKL 324


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = +2

Query: 11  RGCRAGGKT*T----NPSRTSFRP*ENCNCGSILQTRTW 115
           +GC AG +       +P+RT F+  ++ + G    + TW
Sbjct: 399 QGCGAGKENYQTMSRDPARTPFQWDDSVSAGFSSSSNTW 437


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,314
Number of Sequences: 438
Number of extensions: 1609
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4887441
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)