Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_A05
         (227 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D14530-1|BAA03400.1|  143|Homo sapiens yeast ribosomal protein S...    67   1e-11
CR456996-1|CAG33277.1|  143|Homo sapiens RPS23 protein.                67   1e-11
BC070221-1|AAH70221.1|  143|Homo sapiens ribosomal protein S23 p...    67   1e-11
Y11681-2|CAA72377.1|  138|Homo sapiens mitochondrial ribosomal p...    33   0.22 
CR407609-1|CAG28537.1|  138|Homo sapiens MRPS12 protein.               33   0.22 
BC007499-1|AAH07499.1|  138|Homo sapiens mitochondrial ribosomal...    33   0.22 
BC006424-1|AAH06424.1|  138|Homo sapiens mitochondrial ribosomal...    33   0.22 
BC001617-1|AAH01617.1|  138|Homo sapiens mitochondrial ribosomal...    33   0.22 
AF058761-1|AAC64704.1|  138|Homo sapiens ribosomal protein S12 p...    33   0.22 
Y16791-1|CAA76387.1|  425|Homo sapiens type I hair keratin 5 pro...    29   2.7  
X90763-1|CAA62286.1|  425|Homo sapiens HHa5 hair keratin type I ...    29   2.7  
X90762-1|CAA62285.1|  122|Homo sapiens HHa5 hair keratin type I ...    29   2.7  
BC131633-1|AAI31634.1|  730|Homo sapiens WDR27 protein protein.        29   2.7  
EF186024-1|ABM60755.1| 1135|Homo sapiens WTX protein.                  29   3.5  
BC071898-1|AAH71898.1|  437|Homo sapiens four jointed box 1 (Dro...    29   3.5  
BC049171-1|AAH49171.1|  437|Homo sapiens four jointed box 1 (Dro...    29   3.5  
AL355852-3|CAI40637.1|  804|Homo sapiens family with sequence si...    29   3.5  
AL355852-2|CAO03539.1| 1135|Homo sapiens family with sequence si...    29   3.5  
AK097146-1|BAC04964.1|  804|Homo sapiens protein ( Homo sapiens ...    29   3.5  
AJ245599-1|CAB53246.1|  453|Homo sapiens putative secreted ligan...    29   3.5  
BC034673-1|AAH34673.1| 1332|Homo sapiens misshapen-like kinase 1...    27   8.1  
AY775058-1|AAV41830.1| 1312|Homo sapiens misshapen/NIKs-related ...    27   8.1  
AB209450-1|BAD92687.1|  843|Homo sapiens misshapen/NIK-related k...    27   8.1  
AB041926-1|BAA94838.1| 1303|Homo sapiens GCK family kinase MINK-...    27   8.1  
AB035698-1|BAA90753.1| 1295|Homo sapiens Misshapen/NIK-related k...    27   8.1  

>D14530-1|BAA03400.1|  143|Homo sapiens yeast ribosomal protein S28
           homologue protein.
          Length = 143

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 32/38 (84%), Positives = 33/38 (86%)
 Frame = +3

Query: 114 RRTPSVGASHAKGIVLEKVGVEAKQPNSAIRNCVRVQL 227
           +  P  GASHAKGIVLEKVGVEAKQPNSAIR CVRVQL
Sbjct: 37  KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 74



 Score = 65.3 bits (152), Expect = 3e-11
 Identities = 27/41 (65%), Positives = 34/41 (82%)
 Frame = +2

Query: 8   GTRRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFG 130
           G  RG+RTARK  +HRR+Q+W DK++KKAH+GT  KANPFG
Sbjct: 2   GKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFG 42


>CR456996-1|CAG33277.1|  143|Homo sapiens RPS23 protein.
          Length = 143

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 32/38 (84%), Positives = 33/38 (86%)
 Frame = +3

Query: 114 RRTPSVGASHAKGIVLEKVGVEAKQPNSAIRNCVRVQL 227
           +  P  GASHAKGIVLEKVGVEAKQPNSAIR CVRVQL
Sbjct: 37  KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 74



 Score = 65.3 bits (152), Expect = 3e-11
 Identities = 27/41 (65%), Positives = 34/41 (82%)
 Frame = +2

Query: 8   GTRRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFG 130
           G  RG+RTARK  +HRR+Q+W DK++KKAH+GT  KANPFG
Sbjct: 2   GKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFG 42


>BC070221-1|AAH70221.1|  143|Homo sapiens ribosomal protein S23
           protein.
          Length = 143

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 32/38 (84%), Positives = 33/38 (86%)
 Frame = +3

Query: 114 RRTPSVGASHAKGIVLEKVGVEAKQPNSAIRNCVRVQL 227
           +  P  GASHAKGIVLEKVGVEAKQPNSAIR CVRVQL
Sbjct: 37  KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 74



 Score = 65.3 bits (152), Expect = 3e-11
 Identities = 27/41 (65%), Positives = 34/41 (82%)
 Frame = +2

Query: 8   GTRRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFG 130
           G  RG+RTARK  +HRR+Q+W DK++KKAH+GT  KANPFG
Sbjct: 2   GKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFG 42


>Y11681-2|CAA72377.1|  138|Homo sapiens mitochondrial ribosomal
           protein S12 precursor protein.
          Length = 138

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +3

Query: 123 PSVGASHAKGIVLEKVGVEAKQPNSAIRNCVRVQL 227
           P+ G    KG+VL     + K+PNSA R C RV+L
Sbjct: 51  PTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL 85


>CR407609-1|CAG28537.1|  138|Homo sapiens MRPS12 protein.
          Length = 138

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +3

Query: 123 PSVGASHAKGIVLEKVGVEAKQPNSAIRNCVRVQL 227
           P+ G    KG+VL     + K+PNSA R C RV+L
Sbjct: 51  PTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL 85


>BC007499-1|AAH07499.1|  138|Homo sapiens mitochondrial ribosomal
           protein S12 protein.
          Length = 138

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +3

Query: 123 PSVGASHAKGIVLEKVGVEAKQPNSAIRNCVRVQL 227
           P+ G    KG+VL     + K+PNSA R C RV+L
Sbjct: 51  PTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL 85


>BC006424-1|AAH06424.1|  138|Homo sapiens mitochondrial ribosomal
           protein S12 protein.
          Length = 138

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +3

Query: 123 PSVGASHAKGIVLEKVGVEAKQPNSAIRNCVRVQL 227
           P+ G    KG+VL     + K+PNSA R C RV+L
Sbjct: 51  PTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL 85


>BC001617-1|AAH01617.1|  138|Homo sapiens mitochondrial ribosomal
           protein S12 protein.
          Length = 138

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +3

Query: 123 PSVGASHAKGIVLEKVGVEAKQPNSAIRNCVRVQL 227
           P+ G    KG+VL     + K+PNSA R C RV+L
Sbjct: 51  PTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL 85


>AF058761-1|AAC64704.1|  138|Homo sapiens ribosomal protein S12
           protein.
          Length = 138

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +3

Query: 123 PSVGASHAKGIVLEKVGVEAKQPNSAIRNCVRVQL 227
           P+ G    KG+VL     + K+PNSA R C RV+L
Sbjct: 51  PTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL 85


>Y16791-1|CAA76387.1|  425|Homo sapiens type I hair keratin 5
           protein.
          Length = 425

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 83  IPCRPIAARDDDSRACAPCEYPASC 9
           +PC P A     S++C PC   ASC
Sbjct: 378 LPCNPCAPDYSPSKSCLPCLPAASC 402


>X90763-1|CAA62286.1|  425|Homo sapiens HHa5 hair keratin type I
           intermediate filament protein.
          Length = 425

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 83  IPCRPIAARDDDSRACAPCEYPASC 9
           +PC P A     S++C PC   ASC
Sbjct: 378 LPCNPCAPDYSPSKSCLPCLPAASC 402


>X90762-1|CAA62285.1|  122|Homo sapiens HHa5 hair keratin type I
           intermediate filament protein.
          Length = 122

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 83  IPCRPIAARDDDSRACAPCEYPASC 9
           +PC P A     S++C PC   ASC
Sbjct: 75  LPCNPCAPDYSPSKSCLPCLPAASC 99


>BC131633-1|AAI31634.1|  730|Homo sapiens WDR27 protein protein.
          Length = 730

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -1

Query: 155 DALSMRCTNR-RGSPSISYPCGLF*IPCRPIAARDDDSR 42
           D  ++RC     G P+  YPCG+   PC   AA   + R
Sbjct: 642 DLRTLRCERHFEGHPTRGYPCGIAFSPCGRFAACGAEDR 680


>EF186024-1|ABM60755.1| 1135|Homo sapiens WTX protein.
          Length = 1135

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1

Query: 7   RHEAGYSHGAQARESSSRAAMGRQGIQKSPHGYEMEGEPLR 129
           R    ++  A ARE+ +R A GR+   +  H +E  G   R
Sbjct: 584 RAREAHAREAHAREAYTREAYGREAYAREAHTWEAHGREAR 624


>BC071898-1|AAH71898.1|  437|Homo sapiens four jointed box 1
           (Drosophila) protein.
          Length = 437

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = +3

Query: 3   YSARGGVFARRAST*IIVASSDGPTRNSK-KPTWVRDGRRTPSVGASHAKGIVLEKVGVE 179
           + ARGG      +   + A +DGP R S+ +P W    R+     ++   G V    G+E
Sbjct: 70  WDARGGSLKTFRALLTLAAGADGPPRQSRSEPRWHVSARQPRPEESAAVHGGVFWSRGLE 129

Query: 180 AKQP 191
            + P
Sbjct: 130 EQVP 133


>BC049171-1|AAH49171.1|  437|Homo sapiens four jointed box 1
           (Drosophila) protein.
          Length = 437

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = +3

Query: 3   YSARGGVFARRAST*IIVASSDGPTRNSK-KPTWVRDGRRTPSVGASHAKGIVLEKVGVE 179
           + ARGG      +   + A +DGP R S+ +P W    R+     ++   G V    G+E
Sbjct: 70  WDARGGSLKTFRALLTLAAGADGPPRQSRSEPRWHVSARQPRPEESAAVHGGVFWSRGLE 129

Query: 180 AKQP 191
            + P
Sbjct: 130 EQVP 133


>AL355852-3|CAI40637.1|  804|Homo sapiens family with sequence
           similarity 123B protein.
          Length = 804

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1

Query: 7   RHEAGYSHGAQARESSSRAAMGRQGIQKSPHGYEMEGEPLR 129
           R    ++  A ARE+ +R A GR+   +  H +E  G   R
Sbjct: 584 RAREAHAREAHAREAYTREAYGREAYAREAHTWEAHGREAR 624


>AL355852-2|CAO03539.1| 1135|Homo sapiens family with sequence
           similarity 123B protein.
          Length = 1135

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1

Query: 7   RHEAGYSHGAQARESSSRAAMGRQGIQKSPHGYEMEGEPLR 129
           R    ++  A ARE+ +R A GR+   +  H +E  G   R
Sbjct: 584 RAREAHAREAHAREAYTREAYGREAYAREAHTWEAHGREAR 624


>AK097146-1|BAC04964.1|  804|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39827 fis, clone SPLEN2012619. ).
          Length = 804

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1

Query: 7   RHEAGYSHGAQARESSSRAAMGRQGIQKSPHGYEMEGEPLR 129
           R    ++  A ARE+ +R A GR+   +  H +E  G   R
Sbjct: 584 RAREAHAREAHAREAYTREAYGREAYAREAHTWEAHGREAR 624


>AJ245599-1|CAB53246.1|  453|Homo sapiens putative secreted ligand
           protein.
          Length = 453

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = +3

Query: 3   YSARGGVFARRAST*IIVASSDGPTRNSK-KPTWVRDGRRTPSVGASHAKGIVLEKVGVE 179
           + ARGG      +   + A +DGP R S+ +P W    R+     ++   G V    G+E
Sbjct: 70  WDARGGSLKTFRALLTLAAGADGPPRQSRSEPRWHVSARQPRPEESAAVHGGVFWSRGLE 129

Query: 180 AKQP 191
            + P
Sbjct: 130 EQVP 133


>BC034673-1|AAH34673.1| 1332|Homo sapiens misshapen-like kinase 1
           (zebrafish) protein.
          Length = 1332

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
 Frame = +3

Query: 6   SARGGVFARRAST*IIVASSDGPTRNSKKPTWVRDGRRTPSVGASHAKGI--VLEKVGVE 179
           SARG V  + +       +S+GP  +   P WVR     P         I   L   G  
Sbjct: 631 SARGAVIRQNSDP-----TSEGPGPSPNPPAWVRPDNEAPPKVPQRTSSIATALNTSGAG 685

Query: 180 AKQPNSAIR 206
             +P  A+R
Sbjct: 686 GSRPAQAVR 694


>AY775058-1|AAV41830.1| 1312|Homo sapiens misshapen/NIKs-related
           kinase isoform beta protein.
          Length = 1312

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
 Frame = +3

Query: 6   SARGGVFARRAST*IIVASSDGPTRNSKKPTWVRDGRRTPSVGASHAKGI--VLEKVGVE 179
           SARG V  + +       +S+GP  +   P WVR     P         I   L   G  
Sbjct: 611 SARGAVIRQNSDP-----TSEGPGPSPNPPAWVRPDNEAPPKVPQRTSSIATALNTSGAG 665

Query: 180 AKQPNSAIR 206
             +P  A+R
Sbjct: 666 GSRPAQAVR 674


>AB209450-1|BAD92687.1|  843|Homo sapiens misshapen/NIK-related
           kinase isoform 2 variant protein.
          Length = 843

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
 Frame = +3

Query: 6   SARGGVFARRAST*IIVASSDGPTRNSKKPTWVRDGRRTPSVGASHAKGI--VLEKVGVE 179
           SARG V  + +       +S+GP  +   P WVR     P         I   L   G  
Sbjct: 171 SARGAVIRQNSDP-----TSEGPGPSPNPPAWVRPDNEAPPKVPQRTSSIATALNTSGAG 225

Query: 180 AKQPNSAIR 206
             +P  A+R
Sbjct: 226 GSRPAQAVR 234


>AB041926-1|BAA94838.1| 1303|Homo sapiens GCK family kinase MINK-2
           protein.
          Length = 1303

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
 Frame = +3

Query: 6   SARGGVFARRAST*IIVASSDGPTRNSKKPTWVRDGRRTPSVGASHAKGI--VLEKVGVE 179
           SARG V  + +       +S+GP  +   P WVR     P         I   L   G  
Sbjct: 631 SARGAVIRQNSDP-----TSEGPGPSPNPPAWVRPDNEAPPKVPQRTSSIATALNTSGAG 685

Query: 180 AKQPNSAIR 206
             +P  A+R
Sbjct: 686 GSRPAQAVR 694


>AB035698-1|BAA90753.1| 1295|Homo sapiens Misshapen/NIK-related
           kinase MINK-1 protein.
          Length = 1295

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
 Frame = +3

Query: 6   SARGGVFARRAST*IIVASSDGPTRNSKKPTWVRDGRRTPSVGASHAKGI--VLEKVGVE 179
           SARG V  + +       +S+GP  +   P WVR     P         I   L   G  
Sbjct: 631 SARGAVIRQNSDP-----TSEGPGPSPNPPAWVRPDNEAPPKVPQRTSSIATALNTSGAG 685

Query: 180 AKQPNSAIR 206
             +P  A+R
Sbjct: 686 GSRPAQAVR 694


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,598,387
Number of Sequences: 237096
Number of extensions: 780120
Number of successful extensions: 2414
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2414
length of database: 76,859,062
effective HSP length: 54
effective length of database: 64,055,878
effective search space used: 1345173438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)