Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_A05
         (227 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089523-1|AAL90261.1|  143|Drosophila melanogaster GM14585p pro...    86   5e-18
AE013599-1845|AAF58277.2|  143|Drosophila melanogaster CG8415-PA...    86   5e-18
M19494-1|AAA28935.1|  140|Drosophila melanogaster protein ( D.me...    36   0.008
BT015958-1|AAV36843.1|  140|Drosophila melanogaster RH56553p pro...    36   0.008
AL133505-2|CAB65841.1|  140|Drosophila melanogaster EG:BACH59J11...    36   0.008
AL133505-1|CAB63528.1|  154|Drosophila melanogaster EG:BACH59J11...    36   0.008
AE014298-399|AAF45781.1|  140|Drosophila melanogaster CG7925-PB ...    36   0.008
AJ250320-1|CAB65721.1|  140|Drosophila melanogaster technical kn...    34   0.023
U04435-1|AAA18958.1|  609|Drosophila melanogaster GLI-Kr zinc fi...    30   0.50 
BT029391-1|ABK56895.1|  609|Drosophila melanogaster FI01113p pro...    30   0.50 
AY051783-1|AAK93207.1|  609|Drosophila melanogaster LD30441p pro...    30   0.50 
AE014297-163|AAF52084.1|  609|Drosophila melanogaster CG1133-PA ...    30   0.50 
AE014296-1378|AAF50482.1| 1417|Drosophila melanogaster CG7504-PA...    27   3.5  
AE013599-3067|AAS64909.2|  367|Drosophila melanogaster CG13439-P...    27   3.5  
L77907-1|AAC37264.1| 1883|Drosophila melanogaster chromodomain-h...    26   6.2  
BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p pro...    26   6.2  
AE014297-1382|AAF54700.3| 1993|Drosophila melanogaster CG6939-PA...    26   6.2  
AE014297-1381|AAN13531.2| 1973|Drosophila melanogaster CG6939-PB...    26   6.2  
AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA ...    26   6.2  
AY113376-1|AAM29381.1| 1053|Drosophila melanogaster LP10764p pro...    26   8.1  
AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire pro...    26   8.1  
AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-P...    26   8.1  

>AY089523-1|AAL90261.1|  143|Drosophila melanogaster GM14585p
           protein.
          Length = 143

 Score = 86.2 bits (204), Expect = 5e-18
 Identities = 34/41 (82%), Positives = 39/41 (95%)
 Frame = +2

Query: 8   GTRRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFG 130
           G  RG+RTARKHVNHRR+QRWADK++KKAH+GTRWKANPFG
Sbjct: 2   GKPRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFG 42



 Score = 66.9 bits (156), Expect = 4e-12
 Identities = 32/38 (84%), Positives = 33/38 (86%)
 Frame = +3

Query: 114 RRTPSVGASHAKGIVLEKVGVEAKQPNSAIRNCVRVQL 227
           +  P  GASHAKGIVLEKVGVEAKQPNSAIR CVRVQL
Sbjct: 37  KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 74


>AE013599-1845|AAF58277.2|  143|Drosophila melanogaster CG8415-PA
           protein.
          Length = 143

 Score = 86.2 bits (204), Expect = 5e-18
 Identities = 34/41 (82%), Positives = 39/41 (95%)
 Frame = +2

Query: 8   GTRRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFG 130
           G  RG+RTARKHVNHRR+QRWADK++KKAH+GTRWKANPFG
Sbjct: 2   GKPRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFG 42



 Score = 66.9 bits (156), Expect = 4e-12
 Identities = 32/38 (84%), Positives = 33/38 (86%)
 Frame = +3

Query: 114 RRTPSVGASHAKGIVLEKVGVEAKQPNSAIRNCVRVQL 227
           +  P  GASHAKGIVLEKVGVEAKQPNSAIR CVRVQL
Sbjct: 37  KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 74


>M19494-1|AAA28935.1|  140|Drosophila melanogaster protein (
           D.melanogaster tko (technical knockout) locus mRNA
           encoding tko gene product,complete cds. ).
          Length = 140

 Score = 35.9 bits (79), Expect = 0.008
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = +3

Query: 117 RTPSVGASHAKGIVLEKVGVEAKQPNSAIRNCVRVQL 227
           R P  G   AKG+VL+ +  + K+PNSA R CV V+L
Sbjct: 49  RQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL 85


>BT015958-1|AAV36843.1|  140|Drosophila melanogaster RH56553p
           protein.
          Length = 140

 Score = 35.9 bits (79), Expect = 0.008
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = +3

Query: 117 RTPSVGASHAKGIVLEKVGVEAKQPNSAIRNCVRVQL 227
           R P  G   AKG+VL+ +  + K+PNSA R CV V+L
Sbjct: 49  RQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL 85


>AL133505-2|CAB65841.1|  140|Drosophila melanogaster
           EG:BACH59J11.1,FBgn0003714;tko protein.
          Length = 140

 Score = 35.9 bits (79), Expect = 0.008
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = +3

Query: 117 RTPSVGASHAKGIVLEKVGVEAKQPNSAIRNCVRVQL 227
           R P  G   AKG+VL+ +  + K+PNSA R CV V+L
Sbjct: 49  RQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL 85


>AL133505-1|CAB63528.1|  154|Drosophila melanogaster
           EG:BACH59J11.1,FBgn0003714;tko protein.
          Length = 154

 Score = 35.9 bits (79), Expect = 0.008
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = +3

Query: 117 RTPSVGASHAKGIVLEKVGVEAKQPNSAIRNCVRVQL 227
           R P  G   AKG+VL+ +  + K+PNSA R CV V+L
Sbjct: 63  RQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL 99


>AE014298-399|AAF45781.1|  140|Drosophila melanogaster CG7925-PB
           protein.
          Length = 140

 Score = 35.9 bits (79), Expect = 0.008
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = +3

Query: 117 RTPSVGASHAKGIVLEKVGVEAKQPNSAIRNCVRVQL 227
           R P  G   AKG+VL+ +  + K+PNSA R CV V+L
Sbjct: 49  RQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL 85


>AJ250320-1|CAB65721.1|  140|Drosophila melanogaster technical
           knockout protein protein.
          Length = 140

 Score = 34.3 bits (75), Expect = 0.023
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +3

Query: 117 RTPSVGASHAKGIVLEKVGVEAKQPNSAIRNCVRVQ 224
           R P  G   AKG+VL+ +  + K+PNSA R CV V+
Sbjct: 49  RQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVR 84


>U04435-1|AAA18958.1|  609|Drosophila melanogaster GLI-Kr zinc
           finger pair-rule proteinprotein.
          Length = 609

 Score = 29.9 bits (64), Expect = 0.50
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 31  GAQARESSSRAAMGRQGIQKSPHGYEMEGEPLRLVHL 141
           G+    S   +  G  GI+ SPH  + E  P+  VHL
Sbjct: 414 GSAGSSSGVSSLSGGSGIKSSPHSIKSEPNPMHSVHL 450


>BT029391-1|ABK56895.1|  609|Drosophila melanogaster FI01113p
           protein.
          Length = 609

 Score = 29.9 bits (64), Expect = 0.50
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 31  GAQARESSSRAAMGRQGIQKSPHGYEMEGEPLRLVHL 141
           G+    S   +  G  GI+ SPH  + E  P+  VHL
Sbjct: 414 GSAGSSSGVSSLSGGSGIKSSPHSIKSEPNPMHSVHL 450


>AY051783-1|AAK93207.1|  609|Drosophila melanogaster LD30441p
           protein.
          Length = 609

 Score = 29.9 bits (64), Expect = 0.50
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 31  GAQARESSSRAAMGRQGIQKSPHGYEMEGEPLRLVHL 141
           G+    S   +  G  GI+ SPH  + E  P+  VHL
Sbjct: 414 GSAGSSSGVSSLSGGSGIKSSPHSIKSEPNPMHSVHL 450


>AE014297-163|AAF52084.1|  609|Drosophila melanogaster CG1133-PA
           protein.
          Length = 609

 Score = 29.9 bits (64), Expect = 0.50
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 31  GAQARESSSRAAMGRQGIQKSPHGYEMEGEPLRLVHL 141
           G+    S   +  G  GI+ SPH  + E  P+  VHL
Sbjct: 414 GSAGSSSGVSSLSGGSGIKSSPHSIKSEPNPMHSVHL 450


>AE014296-1378|AAF50482.1| 1417|Drosophila melanogaster CG7504-PA
            protein.
          Length = 1417

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 176  NANFFEDDALSMRCTNRRGSPSISY 102
            N  F+ED  ++  CT R  SP I Y
Sbjct: 1223 NQYFYEDQLINAECTARFASPLIPY 1247


>AE013599-3067|AAS64909.2|  367|Drosophila melanogaster CG13439-PA
           protein.
          Length = 367

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = -2

Query: 115 LPSRTHVGFFEFLVGPSLLATMIHVL---ARRANTPP 14
           LPSR ++G   +L+G  LL +M+ +    A  A TPP
Sbjct: 3   LPSRANIGLLNWLIGWLLLLSMVLLRGYNAALAPTPP 39


>L77907-1|AAC37264.1| 1883|Drosophila melanogaster
           chromodomain-helicase-DNA-bindingprotein protein.
          Length = 1883

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 191 RLLGFNANFFEDDALSMRCTNRRGSPSISY 102
           R+  F++   +DD  S RC  RR   ++SY
Sbjct: 251 RVKPFSSEDSDDDDASKRCATRRKGAAVSY 280


>BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p
           protein.
          Length = 1645

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 191 RLLGFNANFFEDDALSMRCTNRRGSPSISY 102
           R+  F++   +DD  S RC  RR   ++SY
Sbjct: 251 RVKPFSSEDSDDDDASKRCATRRKGAAVSY 280


>AE014297-1382|AAF54700.3| 1993|Drosophila melanogaster CG6939-PA,
           isoform A protein.
          Length = 1993

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 15/48 (31%), Positives = 19/48 (39%)
 Frame = +2

Query: 20  GIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGWCISC*GHRPR 163
           G  T  K V    E+ W D  F +   G  W   P GW +S     P+
Sbjct: 26  GQPTCGKIVQRFPEKDWPDTPFIE---GIEWFCQPLGWSLSYEKQEPK 70


>AE014297-1381|AAN13531.2| 1973|Drosophila melanogaster CG6939-PB,
           isoform B protein.
          Length = 1973

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 15/48 (31%), Positives = 19/48 (39%)
 Frame = +2

Query: 20  GIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGWCISC*GHRPR 163
           G  T  K V    E+ W D  F +   G  W   P GW +S     P+
Sbjct: 26  GQPTCGKIVQRFPEKDWPDTPFIE---GIEWFCQPLGWSLSYEKQEPK 70


>AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA
           protein.
          Length = 1883

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 191 RLLGFNANFFEDDALSMRCTNRRGSPSISY 102
           R+  F++   +DD  S RC  RR   ++SY
Sbjct: 251 RVKPFSSEDSDDDDASKRCATRRKGAAVSY 280


>AY113376-1|AAM29381.1| 1053|Drosophila melanogaster LP10764p protein.
          Length = 1053

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 174  RQLFRGRCP*HEMHQPKGFAFHL 106
            +QL    CP H MH P G  F L
Sbjct: 1020 KQLLGDECPLHVMHPPTGEEFAL 1042


>AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire protein.
          Length = 5233

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 174  RQLFRGRCP*HEMHQPKGFAFHL 106
            +QL    CP H MH P G  F L
Sbjct: 5200 KQLLGDECPLHVMHPPTGEEFAL 5222


>AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-PA
            protein.
          Length = 5233

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 174  RQLFRGRCP*HEMHQPKGFAFHL 106
            +QL    CP H MH P G  F L
Sbjct: 5200 KQLLGDECPLHVMHPPTGEEFAL 5222


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,848,809
Number of Sequences: 53049
Number of extensions: 228590
Number of successful extensions: 527
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 24,988,368
effective HSP length: 55
effective length of database: 22,070,673
effective search space used: 441413460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)