Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_A04
         (215 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    24   0.23 
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   0.72 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    20   3.8  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    19   5.1  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    19   5.1  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    19   5.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      19   6.7  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     19   6.7  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    19   8.8  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    19   8.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    19   8.8  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    19   8.8  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    19   8.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    19   8.8  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    19   8.8  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    19   8.8  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.8 bits (49), Expect = 0.23
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 96  INFNTFLVQWLPFDYCSISE 155
           I    FL+ WLPF  C+I +
Sbjct: 623 IVLGVFLICWLPFFTCNIMD 642


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.2 bits (45), Expect = 0.72
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 143 TIIKR*PLYKKGVEIYFLFKRLIIFI 66
           TI    PLY+    I+FL   LII +
Sbjct: 205 TIYADFPLYELSTIIFFLIPMLIILV 230


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 96  INFNTFLVQWLPF 134
           I  + F+V WLPF
Sbjct: 376 IIMSAFIVCWLPF 388


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 211 NYKRYLQIVH*FTKKI 164
           N  + L+I+H  TKK+
Sbjct: 243 NQIKLLEIIHGLTKKV 258


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 8/30 (26%), Positives = 13/30 (43%)
 Frame = +3

Query: 105 NTFLVQWLPFDYCSISELCLIFFVN*CTIC 194
           +T +V     + C+    CL  F+N    C
Sbjct: 131 STTIVSGAMAERCNFKAYCLFSFLNTIVYC 160


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 10  NSARGNILDINYHW*KKI*MNIINL 84
           N+   N  + NY+  KK+  NIIN+
Sbjct: 335 NNNYNNYNNNNYNNYKKLYYNIINI 359


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 57  KNMNEYN*P 83
           KNM EYN P
Sbjct: 209 KNMREYNDP 217


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 115 LYNGYLLIIVPSPNY 159
           LYN  L+   PSP Y
Sbjct: 428 LYNPALIQSQPSPQY 442


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 110 GVEIYFLFKRLIIFIHIFFYQ 48
           G+ +YF+   LII+ + F  Q
Sbjct: 221 GIWVYFVPLFLIIYSYWFIIQ 241


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 111 FLVQWLPF 134
           F+V WLPF
Sbjct: 336 FVVCWLPF 343


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 111 FLVQWLPF 134
           F+V WLPF
Sbjct: 336 FVVCWLPF 343


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 207 IKDIYKLYTN 178
           +KDIY+ Y N
Sbjct: 60  VKDIYEKYKN 69


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 7/20 (35%), Positives = 8/20 (40%)
 Frame = -3

Query: 195 YKLYTNSQKKLNIIRRWNNN 136
           Y  Y N     N    +NNN
Sbjct: 324 YSNYNNYNNNYNNYNNYNNN 343


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 111 FLVQWLPF 134
           F+V WLPF
Sbjct: 336 FVVCWLPF 343


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +3

Query: 96  INFNTFLVQWLPFDYCSISELC 161
           I F T LV +LP D      LC
Sbjct: 263 ITFLTVLVFYLPSDSGEKVSLC 284


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 110 GVEIYFLFKRLIIFIHIFFYQ 48
           G+ +YF+   LII+ + F  Q
Sbjct: 97  GIWVYFVPLFLIIYSYWFIIQ 117


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,170
Number of Sequences: 438
Number of extensions: 1586
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3154875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)