SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_A01
         (240 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p pro...    93   6e-20
AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p pro...    93   6e-20
AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB...    93   6e-20
AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD...    93   6e-20
AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC...    93   6e-20
AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA...    93   6e-20
BT028844-1|ABI34225.2|  312|Drosophila melanogaster RT01107p pro...    27   2.6  
AE014297-800|AAF54277.2|  312|Drosophila melanogaster CG11762-PA...    27   2.6  
D84313-1|BAA21706.1|  213|Drosophila melanogaster rab2 protein.        27   3.5  
BT003315-1|AAO25075.1|  213|Drosophila melanogaster GH01619p pro...    27   3.5  
AE013599-209|AAM70817.1|  213|Drosophila melanogaster CG3269-PA ...    27   3.5  
AE014135-150|AAN06593.1| 3183|Drosophila melanogaster CG2999-PB,...    26   6.1  

>BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p
           protein.
          Length = 250

 Score = 92.7 bits (220), Expect = 6e-20
 Identities = 43/72 (59%), Positives = 56/72 (77%)
 Frame = +2

Query: 23  MSTKILKAGAIEPDTFETSISHALVELETNSDLKAQLRELYITNAKEIELHNKKSIIIYV 202
           + +KI+K G  +PD FE SI+ ALVELE NSDLK  LR+L+IT A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 203 PMPKLNAFQKIQ 238
           P+P+   FQKIQ
Sbjct: 63  PIPQQKVFQKIQ 74


>AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p
           protein.
          Length = 194

 Score = 92.7 bits (220), Expect = 6e-20
 Identities = 43/72 (59%), Positives = 56/72 (77%)
 Frame = +2

Query: 23  MSTKILKAGAIEPDTFETSISHALVELETNSDLKAQLRELYITNAKEIELHNKKSIIIYV 202
           + +KI+K G  +PD FE SI+ ALVELE NSDLK  LR+L+IT A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 203 PMPKLNAFQKIQ 238
           P+P+   FQKIQ
Sbjct: 63  PIPQQKVFQKIQ 74


>AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB,
           isoform B protein.
          Length = 250

 Score = 92.7 bits (220), Expect = 6e-20
 Identities = 43/72 (59%), Positives = 56/72 (77%)
 Frame = +2

Query: 23  MSTKILKAGAIEPDTFETSISHALVELETNSDLKAQLRELYITNAKEIELHNKKSIIIYV 202
           + +KI+K G  +PD FE SI+ ALVELE NSDLK  LR+L+IT A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 203 PMPKLNAFQKIQ 238
           P+P+   FQKIQ
Sbjct: 63  PIPQQKVFQKIQ 74


>AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD,
           isoform D protein.
          Length = 194

 Score = 92.7 bits (220), Expect = 6e-20
 Identities = 43/72 (59%), Positives = 56/72 (77%)
 Frame = +2

Query: 23  MSTKILKAGAIEPDTFETSISHALVELETNSDLKAQLRELYITNAKEIELHNKKSIIIYV 202
           + +KI+K G  +PD FE SI+ ALVELE NSDLK  LR+L+IT A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 203 PMPKLNAFQKIQ 238
           P+P+   FQKIQ
Sbjct: 63  PIPQQKVFQKIQ 74


>AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC,
           isoform C protein.
          Length = 194

 Score = 92.7 bits (220), Expect = 6e-20
 Identities = 43/72 (59%), Positives = 56/72 (77%)
 Frame = +2

Query: 23  MSTKILKAGAIEPDTFETSISHALVELETNSDLKAQLRELYITNAKEIELHNKKSIIIYV 202
           + +KI+K G  +PD FE SI+ ALVELE NSDLK  LR+L+IT A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 203 PMPKLNAFQKIQ 238
           P+P+   FQKIQ
Sbjct: 63  PIPQQKVFQKIQ 74


>AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA,
           isoform A protein.
          Length = 194

 Score = 92.7 bits (220), Expect = 6e-20
 Identities = 43/72 (59%), Positives = 56/72 (77%)
 Frame = +2

Query: 23  MSTKILKAGAIEPDTFETSISHALVELETNSDLKAQLRELYITNAKEIELHNKKSIIIYV 202
           + +KI+K G  +PD FE SI+ ALVELE NSDLK  LR+L+IT A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 203 PMPKLNAFQKIQ 238
           P+P+   FQKIQ
Sbjct: 63  PIPQQKVFQKIQ 74


>BT028844-1|ABI34225.2|  312|Drosophila melanogaster RT01107p
           protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 41  KAGAIEPDTFETSISHALVELETNSDLKAQLRE 139
           K G +  +TF+  I    ++   N D KAQLRE
Sbjct: 110 KEGELVEETFQVLIEEEPMDKTLNRDAKAQLRE 142


>AE014297-800|AAF54277.2|  312|Drosophila melanogaster CG11762-PA
           protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 41  KAGAIEPDTFETSISHALVELETNSDLKAQLRE 139
           K G +  +TF+  I    ++   N D KAQLRE
Sbjct: 110 KEGELVEETFQVLIEEEPMDKTLNRDAKAQLRE 142


>D84313-1|BAA21706.1|  213|Drosophila melanogaster rab2 protein.
          Length = 213

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 86  HALVELETNSDLKAQLRELYITNAKEI 166
           H LV +ET++   A + E +I  AKEI
Sbjct: 141 HGLVFMETSARTAANVEEAFINTAKEI 167


>BT003315-1|AAO25075.1|  213|Drosophila melanogaster GH01619p
           protein.
          Length = 213

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 86  HALVELETNSDLKAQLRELYITNAKEI 166
           H LV +ET++   A + E +I  AKEI
Sbjct: 141 HGLVFMETSARTAANVEEAFINTAKEI 167


>AE013599-209|AAM70817.1|  213|Drosophila melanogaster CG3269-PA
           protein.
          Length = 213

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 86  HALVELETNSDLKAQLRELYITNAKEI 166
           H LV +ET++   A + E +I  AKEI
Sbjct: 141 HGLVFMETSARTAANVEEAFINTAKEI 167


>AE014135-150|AAN06593.1| 3183|Drosophila melanogaster CG2999-PB,
           isoform B protein.
          Length = 3183

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +2

Query: 101 LETNSDLKAQLRELYITNAKEIELHNKKSI 190
           L  NS+L  QL+   I   +EIE+H KK I
Sbjct: 746 LRNNSNLDEQLK---ILETQEIEIHRKKKI 772


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,238,253
Number of Sequences: 53049
Number of extensions: 166237
Number of successful extensions: 337
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 337
length of database: 24,988,368
effective HSP length: 59
effective length of database: 21,858,477
effective search space used: 437169540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -