Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_A01
         (240 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    28   0.018
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   1.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   1.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   2.8  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    19   6.4  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    19   8.5  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    19   8.5  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    19   8.5  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    19   8.5  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 27.9 bits (59), Expect = 0.018
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +2

Query: 62  DTFETSISHALVELETNSDLKAQLRE 139
           +T  T++S+AL EL  N D++ +LRE
Sbjct: 307 ETSSTTMSNALYELALNQDVQKKLRE 332


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 1.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 146 ITNAKEIELHNKKSIIIYVPMPKLN 220
           ++ A  +ELHN     IY  + +LN
Sbjct: 462 LSAAYNVELHNSSPFSIYSFLERLN 486


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 1.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 146 ITNAKEIELHNKKSIIIYVPMPKLN 220
           ++ A  +ELHN     IY  + +LN
Sbjct: 500 LSAAYNVELHNSSPFSIYSFLERLN 524


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 2.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 11  TRFKMSTKILKAGAIEPDTFE 73
           TRF +   IL A   +PD F+
Sbjct: 226 TRFDILPLILSANGHDPDYFD 246


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 19.4 bits (38), Expect = 6.4
 Identities = 4/9 (44%), Positives = 8/9 (88%)
 Frame = -1

Query: 240 IWIFWNAFS 214
           +W+FW +F+
Sbjct: 220 LWLFWPSFN 228


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 4/6 (66%), Positives = 5/6 (83%)
 Frame = -2

Query: 167 QFPWHW 150
           Q+PW W
Sbjct: 97  QYPWQW 102


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +3

Query: 141 CTLPMPRKLNFITKNQLS 194
           C LP P+  N     +LS
Sbjct: 628 CLLPRPKSENNFASQELS 645


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +3

Query: 141 CTLPMPRKLNFITKNQLS 194
           C LP P+  N     +LS
Sbjct: 596 CLLPRPKSENNFASQELS 613


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 74  TSISHALVELETNSDLKAQL 133
           TSI+   VE +  +D+K Q+
Sbjct: 864 TSINSITVEKDVINDVKTQI 883


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,947
Number of Sequences: 438
Number of extensions: 986
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4024224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)