Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_P24
         (262 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   0.45 
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   2.4  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    21   7.3  
DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted ...    21   9.7  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    21   9.7  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +2

Query: 80  SKGFGFVCFSSPEEATKAVTE 142
           +KGF FV  +SPEEA K V E
Sbjct: 427 NKGF-FVQINSPEEAKKKVVE 446


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/36 (22%), Positives = 18/36 (50%)
 Frame = +2

Query: 134 VTEMNGRIVGTKPLYVALAQRKEDCKAHLTSQYMQR 241
           + E    +   +P Y A+ +++E+C   L  +  +R
Sbjct: 337 IAEKEKELEQVRPRYEAMRRKEEECSRELNLKEQKR 372


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +2

Query: 74  GRSKGFGFVCFSSPEEATKAVTEMNGRIVG 163
           G   G G    SSP E +  V  +  R+VG
Sbjct: 27  GLGSGIGGTGPSSPGEESALVGNLTARMVG 56


>DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted
           carbonic anhydrase protein.
          Length = 318

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 211 FAVFLALS*SNIKRFCSNNTSIHFS 137
           F   L LS + +KRF + +T IH S
Sbjct: 250 FPDLLELSVNQMKRFRTLDTGIHGS 274


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 175 KRFCSNNTSIHF 140
           KR+C N+ SI F
Sbjct: 14  KRYCINSASIEF 25


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 283,522
Number of Sequences: 2352
Number of extensions: 5135
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 13983072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)