Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_P23
(376 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 209 1e-53
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 184 6e-46
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 180 6e-45
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 159 2e-38
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 147 7e-35
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 137 7e-32
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 133 1e-30
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 128 4e-29
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 126 1e-28
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 108 4e-23
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 103 1e-21
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 92 3e-18
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 89 3e-17
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 89 3e-17
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 83 2e-15
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 79 3e-14
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 75 3e-13
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 53 2e-06
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 52 3e-06
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 52 5e-06
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 51 6e-06
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 50 1e-05
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 50 1e-05
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 48 4e-05
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 48 6e-05
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 45 4e-04
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 45 5e-04
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 44 7e-04
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 43 0.002
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 43 0.002
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 40 0.011
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 38 0.045
UniRef50_A1FFR2 Cluster: General secretion pathway protein GspK ... 34 0.98
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 34 0.98
UniRef50_Q1DMF8 Cluster: Predicted protein; n=1; Coccidioides im... 33 1.3
UniRef50_Q81B91 Cluster: Putative uncharacterized protein; n=4; ... 33 1.7
UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 32 3.0
UniRef50_A3PDQ5 Cluster: Putative uncharacterized protein; n=1; ... 32 3.9
UniRef50_UPI0000E498D6 Cluster: PREDICTED: similar to Cat eye sy... 31 5.2
UniRef50_Q8MPF3 Cluster: GPI transamidase 8; n=1; Toxoplasma gon... 31 5.2
UniRef50_O66830 Cluster: Uncharacterized protein aq_555; n=1; Aq... 31 5.2
UniRef50_A5D5F4 Cluster: ABC-type cobalt transport system, perme... 31 6.9
UniRef50_A5AFT7 Cluster: Putative uncharacterized protein; n=2; ... 31 6.9
UniRef50_UPI0000E47BA0 Cluster: PREDICTED: similar to ankyrin 2,... 31 9.1
UniRef50_Q5KVU2 Cluster: Putative uncharacterized protein GK2909... 31 9.1
UniRef50_Q41DV7 Cluster: Rod shape-determining protein MreC, sub... 31 9.1
UniRef50_Q5DG44 Cluster: SJCHGC04008 protein; n=1; Schistosoma j... 31 9.1
UniRef50_Q6C8L5 Cluster: Yarrowia lipolytica chromosome D of str... 31 9.1
UniRef50_Q6ZNA4 Cluster: E3 ubiquitin-protein ligase Arkadia; n=... 31 9.1
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 209 bits (510), Expect = 1e-53
Identities = 97/121 (80%), Positives = 111/121 (91%)
Frame = +3
Query: 9 LVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMD 188
LVNRTQGTKIAS+GLKGRVFEVSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM
Sbjct: 48 LVNRTQGTKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMA 107
Query: 189 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAI 368
LTTDKLR MVKKWQTLIE ++DVKTTDG++LRVFCIGFT KD++SQRKTCYAQH+Q++ I
Sbjct: 108 LTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNI 167
Query: 369 R 371
R
Sbjct: 168 R 168
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 184 bits (447), Expect = 6e-46
Identities = 90/122 (73%), Positives = 101/122 (82%)
Frame = +3
Query: 9 LVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMD 188
LV RTQGTKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI EDVQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 189 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAI 368
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 369 RK 374
RK
Sbjct: 165 RK 166
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 180 bits (439), Expect = 6e-45
Identities = 87/122 (71%), Positives = 101/122 (82%)
Frame = +3
Query: 9 LVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMD 188
LV+RTQGTKIASEGLK RVFE+SLADLQAD D +++RK RL AEDVQGRNVL NF GMD
Sbjct: 442 LVSRTQGTKIASEGLKHRVFEISLADLQADED--QAYRKIRLRAEDVQGRNVLTNFWGMD 499
Query: 189 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAI 368
TTDKLR +V+KWQTLIEA++DVKTTD Y LR+FCI FT K +KTCYAQ +Q+R I
Sbjct: 500 FTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQI 559
Query: 369 RK 374
R+
Sbjct: 560 RR 561
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 159 bits (386), Expect = 2e-38
Identities = 77/121 (63%), Positives = 97/121 (80%)
Frame = +3
Query: 12 VNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDL 191
VNRTQGTK+AS+GLKGRV+EVSLAD++ D + FRK +L AE+V+GRNVL NF+GMDL
Sbjct: 47 VNRTQGTKLASDGLKGRVYEVSLADMK--DDESQVFRKIKLRAEEVEGRNVLTNFYGMDL 104
Query: 192 TTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIR 371
T+DKLR ++ KW TLIE +DVKTTDGY LRVF I FT K ++KT YA+ ++V+AIR
Sbjct: 105 TSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKAIR 164
Query: 372 K 374
K
Sbjct: 165 K 165
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 147 bits (356), Expect = 7e-35
Identities = 70/122 (57%), Positives = 92/122 (75%)
Frame = +3
Query: 9 LVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMD 188
LVNR+ G K A++ LKGR+FEVSLADLQ D D +FRK +L ++VQG+N L NFHG+D
Sbjct: 47 LVNRSSGMKNANDALKGRIFEVSLADLQKDED--HAFRKIKLRVDEVQGKNCLTNFHGLD 104
Query: 189 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAI 368
T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F I T + +KT YA +Q+RAI
Sbjct: 105 FTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTYAASSQIRAI 164
Query: 369 RK 374
R+
Sbjct: 165 RR 166
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 137 bits (331), Expect = 7e-32
Identities = 67/122 (54%), Positives = 90/122 (73%)
Frame = +3
Query: 9 LVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMD 188
+VN+T GT+IASE LKGRV EV+LADL + KF+ EDV G++ L FHG+
Sbjct: 49 VVNKTAGTRIASEQLKGRVVEVNLADLMENEKFGAYNYKFK--CEDVNGKDCLMIFHGLK 106
Query: 189 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAI 368
LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT++ + +KT YA+ Q++ I
Sbjct: 107 LTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAKSAQIKKI 166
Query: 369 RK 374
RK
Sbjct: 167 RK 168
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 133 bits (321), Expect = 1e-30
Identities = 62/125 (49%), Positives = 92/125 (73%), Gaps = 3/125 (2%)
Frame = +3
Query: 9 LVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMD 188
LV ++ G +IASE +KGRV E +LADL+ D+ ++++RK +L+ ++V GRN +F+G+D
Sbjct: 49 LVTKSSGNRIASEEIKGRVVESTLADLK-DNSNDKAWRKVKLVIDEVDGRNAKTSFYGLD 107
Query: 189 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTL---SQRKTCYAQHTQV 359
+T D+L M++KWQTLIEA +D KT DGY++RVF + FT K + S TCYA+ +QV
Sbjct: 108 ITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQV 167
Query: 360 RAIRK 374
RAIR+
Sbjct: 168 RAIRR 172
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 128 bits (308), Expect = 4e-29
Identities = 54/121 (44%), Positives = 83/121 (68%)
Frame = +3
Query: 9 LVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMD 188
+ N+TQGT+IA++ L+GRVFE +LADL + E ++RK R ++VQGRN+L FH M+
Sbjct: 48 ICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSME 107
Query: 189 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAI 368
+TTDK+ +++KW T +E ++VKT DGY +R+F + FT Q + CYA+ V+ +
Sbjct: 108 VTTDKMANLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWL 167
Query: 369 R 371
R
Sbjct: 168 R 168
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 126 bits (304), Expect = 1e-28
Identities = 59/121 (48%), Positives = 85/121 (70%)
Frame = +3
Query: 12 VNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDL 191
+N++ GT +A+E +KGRV E SLADLQ SD + ++RK +LI +DV+G +F+G+D
Sbjct: 46 INKSAGTVVATEAIKGRVVEASLADLQGQSD-QMAWRKVKLIIDDVEGTRCRTSFYGLDS 104
Query: 192 TTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIR 371
T DK+ M+KK QTLIE ++ ++ DGY+LR+F I FT QRKT YAQ +Q++ IR
Sbjct: 105 TKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKTTYAQRSQIKDIR 164
Query: 372 K 374
K
Sbjct: 165 K 165
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 108 bits (259), Expect = 4e-23
Identities = 52/85 (61%), Positives = 62/85 (72%)
Frame = +3
Query: 117 FRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 296
FRKF+L EDVQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 297 GFTNKDTLSQRKTCYAQHTQVRAIR 371
FT K Q+ YAQ T+++ +R
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLR 90
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 103 bits (246), Expect = 1e-21
Identities = 61/120 (50%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
Frame = +3
Query: 12 VNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDL 191
V R Q TK+ S GL G VFE SLA LQ D RKF+LI ED++G+N L N +GMDL
Sbjct: 34 VLRKQETKMVSVGLNGLVFEASLASLQNDKVV---VRKFKLITEDMRGKNGLTNSYGMDL 90
Query: 192 TTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF-TNKDTLSQRKTCYAQHTQVRAI 368
T DK V KWQ ++EA+ DVKT D Y+L +FC+G+ TN T R+ AQ+ QV I
Sbjct: 91 TWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTTRYARQLVCAQYQQVHQI 149
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 92.3 bits (219), Expect = 3e-18
Identities = 52/87 (59%), Positives = 63/87 (72%)
Frame = +3
Query: 9 LVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMD 188
LV RTQGTKIAS+G RVFEVSLADLQ D E +FRKF+LI EDVQG+N L NFHG+D
Sbjct: 48 LVTRTQGTKIASDG---RVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGVD 101
Query: 189 LTTDKLRWMVKKWQTLIEANIDVKTTD 269
LT+DK+ ++K I +V+T D
Sbjct: 102 LTSDKITSQIRKKMMEIMTR-EVQTND 127
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 88.6 bits (210), Expect = 3e-17
Identities = 44/120 (36%), Positives = 69/120 (57%)
Frame = +3
Query: 12 VNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDL 191
V +T G ++A++ + RV+EV+L DL ++ KF L + V L NFHGMD+
Sbjct: 46 VTKTAGLRVATDVINHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDI 105
Query: 192 TTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIR 371
T K + +K I+ +D+ TTDGY+LRVF I FT++ +RK C+ + +R +R
Sbjct: 106 TRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHVKGRVIRMMR 165
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 88.6 bits (210), Expect = 3e-17
Identities = 45/106 (42%), Positives = 64/106 (60%)
Frame = +3
Query: 57 GRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 236
GR ++V+ ADL ++D RKF D++G + F GM+LT+DK + M+KKW TL
Sbjct: 15 GRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTL 72
Query: 237 IEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRK 374
IEA D+ DG V RVF +G T + +KTCY +H+ + IRK
Sbjct: 73 IEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRK 118
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 82.6 bits (195), Expect = 2e-15
Identities = 43/64 (67%), Positives = 49/64 (76%)
Frame = +3
Query: 9 LVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMD 188
LV RTQGTKIAS+GLKG VFE+SLADLQ D E +FRKF+LI EDVQG+ L NF M
Sbjct: 48 LVTRTQGTKIASDGLKGGVFEMSLADLQND---EVAFRKFKLITEDVQGKRCLINFRSMG 104
Query: 189 LTTD 200
L+ D
Sbjct: 105 LSCD 108
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 79.0 bits (186), Expect = 3e-14
Identities = 47/120 (39%), Positives = 71/120 (59%), Gaps = 1/120 (0%)
Frame = +3
Query: 15 NRTQGTKIASEGLKGRVFEVSLADLQAD-SDAERSFRKFRLIAEDVQGRNVLCNFHGMDL 191
N+ ++ + + RV+E+S AD+ D S A R F +R IA G V F GM L
Sbjct: 46 NKCARGRVPMDYVNNRVWELSHADMVNDLSHAYRLF-SWRSIAA---GSEVYTQFAGMRL 101
Query: 192 TTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIR 371
T DKL +++K++T+I+A++D KT DG++LR+F IGFT K S + YA + R +R
Sbjct: 102 THDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKNHTYANSHKARQVR 161
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 75.4 bits (177), Expect = 3e-13
Identities = 38/111 (34%), Positives = 60/111 (54%)
Frame = +3
Query: 42 SEGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVK 221
+ + ++++VSLAD+ E S F + + FHG+ LT DK+ ++K
Sbjct: 54 NSSVDNKIYQVSLADILGKE--EFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIK 111
Query: 222 KWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRK 374
KW TLIE ++ KT DGY L++F I + K + KT Y +Q RA+R+
Sbjct: 112 KWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSSQKRALRR 162
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 52.8 bits (121), Expect = 2e-06
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Frame = +3
Query: 27 GTKIASEG--LKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTD 200
GT +A + L GR E ++ +L +D ++ K L +V G + G +LTTD
Sbjct: 33 GTTMAGDPSLLVGRNVETTVGELT--NDMTKNNTKVILRVNNVVGDIATTDLMGHELTTD 90
Query: 201 KLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQR 329
+R +VK+ + I+AN+DV+T DG+V+RV FT K S +
Sbjct: 91 YVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIKRARSSQ 133
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 52.4 bits (120), Expect = 3e-06
Identities = 30/82 (36%), Positives = 45/82 (54%)
Frame = +3
Query: 60 RVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLI 239
R EVSL D+ D KF++ V+G L F G++LT D +R +V+K + +
Sbjct: 55 RTLEVSLYDITKDISHLPIKLKFQI--HRVEGLKALTRFKGLELTRDYIRSLVRKGTSKV 112
Query: 240 EANIDVKTTDGYVLRVFCIGFT 305
A +VKT DG V+R+ +G T
Sbjct: 113 TAITEVKTKDGMVMRIAVLGIT 134
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 51.6 bits (118), Expect = 5e-06
Identities = 31/85 (36%), Positives = 48/85 (56%)
Frame = +3
Query: 57 GRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 236
GRV E +L D+ D + FR+ E++ G + +F G +LT D +R +VK+ +
Sbjct: 44 GRVMESTLGDVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSK 101
Query: 237 IEANIDVKTTDGYVLRVFCIGFTNK 311
I+AN+ V T DG+ +RV I T K
Sbjct: 102 IDANVVVTTKDGFKVRVKPIVLTVK 126
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 51.2 bits (117), Expect = 6e-06
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +3
Query: 57 GRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 236
GR E +LA+L D + +++K V G N F +LT + L + ++ +
Sbjct: 46 GRTVETTLAELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSK 105
Query: 237 IEANIDVKTTDGYVLRVFCIGFT-NKDTLSQRKTCYAQHTQV 359
IE +DV T DGY LRV + FT + SQ++ A Q+
Sbjct: 106 IEDIVDVTTADGYKLRVKSVVFTVRRCKTSQKRAIRAIMRQI 147
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 50.0 bits (114), Expect = 1e-05
Identities = 31/93 (33%), Positives = 50/93 (53%)
Frame = +3
Query: 57 GRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 236
GRV E +L DL + F++ VQG N F G D+TTD +R M+++ ++
Sbjct: 49 GRVAESTLYDLSGNFKKMHVKLYFKI--NRVQGTNAYTRFIGHDMTTDYIRRMIRRRRSR 106
Query: 237 IEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKT 335
I+ +V+T+DGY +RV + ++ S KT
Sbjct: 107 IDMIFNVETSDGYRMRVKVLTVPDRRIKSSIKT 139
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 50.0 bits (114), Expect = 1e-05
Identities = 39/110 (35%), Positives = 54/110 (49%)
Frame = +3
Query: 45 EGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKK 224
E + GRV E +L D+ D FR+ DV+G F G L D +R +V++
Sbjct: 34 EKVIGRVLETTLGDVLDDITKHHIKVFFRIY--DVEGTTAYSKFEGHRLMRDYVRSLVRR 91
Query: 225 WQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRK 374
+ I+ IDV T DGY +RV + FT T A+ +Q RAIRK
Sbjct: 92 GTSRIDGVIDVVTKDGYKVRVAGLAFT---------TRRAKTSQQRAIRK 132
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 48.4 bits (110), Expect = 4e-05
Identities = 29/95 (30%), Positives = 48/95 (50%)
Frame = +3
Query: 51 LKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 230
L GR+ E+SL DL + + F++ + V G N F G D T + L+ V++ +
Sbjct: 49 LIGRISEISLRDLTNEHSKHMTRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRR 106
Query: 231 TLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKT 335
+ I A ++V+T DG+ +RV + T KT
Sbjct: 107 SKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT 141
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 48.0 bits (109), Expect = 6e-05
Identities = 29/85 (34%), Positives = 43/85 (50%)
Frame = +3
Query: 57 GRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 236
GR +L +L DS A + F++ DV F +LT D LR +V++ +
Sbjct: 42 GRTITTTLGELTGDSGANNTKLTFKIT--DVGSDTAYTEFIKYELTRDYLRSLVRRGASK 99
Query: 237 IEANIDVKTTDGYVLRVFCIGFTNK 311
+EA+I V TTD Y +RV + T K
Sbjct: 100 VEASITVLTTDDYRIRVQPVALTTK 124
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 45.2 bits (102), Expect = 4e-04
Identities = 25/93 (26%), Positives = 49/93 (52%)
Frame = +3
Query: 54 KGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 233
KGRV EV+L D+ + +++ + I + V + F + + + LR +V++ +
Sbjct: 43 KGRVIEVTLFDILKGDPQQNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSS 101
Query: 234 LIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRK 332
+ +DVKT+DGYV R+ + T + + +K
Sbjct: 102 KVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 44.8 bits (101), Expect = 5e-04
Identities = 26/91 (28%), Positives = 50/91 (54%)
Frame = +3
Query: 39 ASEGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMV 218
+ E + GR++E++ + D +FR ++E V G++ L F G T+ +R +
Sbjct: 50 SDEHIIGRIYEMTQQEFNGDFTKMHVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQI 107
Query: 219 KKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 311
++++ I+ IDV T DGY++R+ + T K
Sbjct: 108 RRYRGKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 44.4 bits (100), Expect = 7e-04
Identities = 27/95 (28%), Positives = 46/95 (48%)
Frame = +3
Query: 51 LKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 230
L GRV E +L D+ D F+++ V+G F G +L D +R + ++
Sbjct: 40 LIGRVMETTLFDITGDYSYVHVKMYFQVVR--VEGDTAYTRFKGHELLRDYIRGLTRRKS 97
Query: 231 TLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKT 335
+ + +V T DGY LRV + FT + + +K+
Sbjct: 98 SKVTGIFNVWTKDGYGLRVTAMAFTRQRCKTSQKS 132
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 43.2 bits (97), Expect = 0.002
Identities = 24/83 (28%), Positives = 41/83 (49%)
Frame = +3
Query: 57 GRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 236
GR E +L DL D F+++ + G + F G +L+ D +R +V++ +
Sbjct: 50 GRKVETTLYDLTGDFSTVYVHLYFKVVRNE--GERLFTEFAGHELSRDYVRSLVRRKSSK 107
Query: 237 IEANIDVKTTDGYVLRVFCIGFT 305
I +D+ T DG+ LRV + T
Sbjct: 108 INKVVDITTKDGFTLRVKTLALT 130
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 43.2 bits (97), Expect = 0.002
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Frame = +3
Query: 57 GRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 236
GR E +L +L D+ + F++ +V + F +LT D LR +V++ +
Sbjct: 42 GRTIETTLGELTNDASENNTKLTFKI--NEVASDSAYTEFIRHELTRDYLRSLVRRGSSK 99
Query: 237 IEANIDVKTTDGYVLRVFCIGFTNKDT-LSQRKTCYAQHTQVRAIRK 374
+EA I V TTD Y +++ + T K SQ K + T + +R+
Sbjct: 100 VEAYITVLTTDDYRVQIQPVAVTTKKADASQEKA--IRRTMIDLVRE 144
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 40.3 bits (90), Expect = 0.011
Identities = 26/94 (27%), Positives = 47/94 (50%)
Frame = +3
Query: 51 LKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 230
L GR EV++ +L D + + K R ++V G F G TTD +R M+++
Sbjct: 44 LIGRGVEVTMRELSGDFS--KQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGT 101
Query: 231 TLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRK 332
+ I+A+ VKT D +++ + T + S ++
Sbjct: 102 SRIDASSVVKTKDDRKVKLHVLAVTTRRAKSSQQ 135
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 38.3 bits (85), Expect = 0.045
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 45 EGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKK 224
E + GRV VSL +L D + F+++ +V G F+G ++T + +R MVKK
Sbjct: 43 ENVPGRVLTVSLGELIQDYSKQNVRASFKIM--NVAGDAAYTQFNGHEMTKEFVRAMVKK 100
Query: 225 WQTLIEANIDVKTTDG-YVLRVFCIGFT-NKDTLSQRKTCYAQHTQV 359
+ +++ I V L+V FT N LSQ + A+ +V
Sbjct: 101 RASRVDSTITVTPLGSTRELQVTITAFTINHARLSQVQELRAKMVKV 147
>UniRef50_A1FFR2 Cluster: General secretion pathway protein GspK
precursor; n=1; Pseudomonas putida W619|Rep: General
secretion pathway protein GspK precursor - Pseudomonas
putida W619
Length = 237
Score = 33.9 bits (74), Expect = 0.98
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = -3
Query: 356 LGMLSVACLALAERILVGETDAENT*DISVSGLNVNVGFNQCLPFLYHPSE---LISGEV 186
+G+LSV LA + + + A + + +GL GFN + +L + L G+V
Sbjct: 16 VGLLSVLLGGLAVSVQLQQRQARWQGNQTQAGLAAQAGFNLAVAYLLRDGQARWLADGQV 75
Query: 185 HAVEIAENITSLDILSDKSEL 123
H + A + + ++S++ +L
Sbjct: 76 HVADFAGSTLHISVVSERGKL 96
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 33.9 bits (74), Expect = 0.98
Identities = 26/105 (24%), Positives = 49/105 (46%)
Frame = +3
Query: 60 RVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLI 239
R EVSL++L +D ++ +L + + F+G L+ D + MV K L+
Sbjct: 62 RNLEVSLSELI--NDYSSYYKIIKLQPYTMNKMFIRTTFNGFRLSYDFIFSMVLKPTKLV 119
Query: 240 EANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRK 374
E +I + T V+ +F + +T L Y + +++R I +
Sbjct: 120 EFSIKINTLKKKVVEIFVL-YTITKNLHSNSITYGKRSRIRKINR 163
>UniRef50_Q1DMF8 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 628
Score = 33.5 bits (73), Expect = 1.3
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -1
Query: 292 QKTRRTYPSVVL--TSMLASISVCHFFTIHLSLSVVRSMPWKLQRTLRP 152
QK RRTYP + T + +IS H + + R +PW+L TLRP
Sbjct: 505 QKERRTYPVQISLDTRQIPNISTRHIVSFVHWDAENRRVPWRLAETLRP 553
>UniRef50_Q81B91 Cluster: Putative uncharacterized protein; n=4;
Bacillus cereus group|Rep: Putative uncharacterized
protein - Bacillus cereus (strain ATCC 14579 / DSM 31)
Length = 151
Score = 33.1 bits (72), Expect = 1.7
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Frame = +3
Query: 96 DSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTD-KLRWMVKKWQ-------TLIEANI 251
D ER F+ ++I+ED++ +LC + D+ T+ KL + K + LI N
Sbjct: 71 DVSPERMFQVLQIISEDIERIEMLCKEYEKDMPTEMKLIYDTKSGKFKAEYEYDLIHTND 130
Query: 252 DVKTTDGY 275
D+KT D +
Sbjct: 131 DIKTADDF 138
>UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasma|Rep: 30S ribosomal protein S3Ae -
Thermoplasma volcanium
Length = 215
Score = 32.3 bits (70), Expect = 3.0
Identities = 23/97 (23%), Positives = 45/97 (46%)
Frame = +3
Query: 42 SEGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVK 221
S + RV EV +++L + FR+ + +G F G + D +R +V+
Sbjct: 41 SNSMVNRVVEVPISELTGNFKKSNEKALFRIT--NCEGTKCKTIFIGHYIGDDYIRRLVR 98
Query: 222 KWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRK 332
+ + I+ DVKT+D ++ V + T+ + +K
Sbjct: 99 RRKERIDIIEDVKTSDNSIITVKIVVVTDGKVTNTKK 135
>UniRef50_A3PDQ5 Cluster: Putative uncharacterized protein; n=1;
Prochlorococcus marinus str. MIT 9301|Rep: Putative
uncharacterized protein - Prochlorococcus marinus
(strain MIT 9301)
Length = 133
Score = 31.9 bits (69), Expect = 3.9
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -3
Query: 158 TSLDILSDKSELAERPFRITISLEISKGDLKNTPL*TLRCNFC 30
T+L I+ +K+ + + F + I ISK D++N + TL C C
Sbjct: 54 TTLGIILEKNNIESKSFYVDI---ISKSDVQNNKISTLHCKIC 93
>UniRef50_UPI0000E498D6 Cluster: PREDICTED: similar to Cat eye
syndrome critical region protein 2; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
Cat eye syndrome critical region protein 2 -
Strongylocentrotus purpuratus
Length = 1822
Score = 31.5 bits (68), Expect = 5.2
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = -2
Query: 180 RGNCREHYVPGHPQR*V*TCGKTFPHHYQPGDQQGRPQKHAPLDPQMQFLFPG 22
+GN + H HPQ + ++ P + PQ H + PQ +PG
Sbjct: 1369 QGNSQSHLQSHHPQSHPQSHSQSHPQGHPHSHPHSHPQSHPQVHPQSHLSYPG 1421
>UniRef50_Q8MPF3 Cluster: GPI transamidase 8; n=1; Toxoplasma
gondii|Rep: GPI transamidase 8 - Toxoplasma gondii
Length = 604
Score = 31.5 bits (68), Expect = 5.2
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 63 VFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVL 167
+ V LAD A A+R FR+ LIAE QG +L
Sbjct: 241 ISSVDLADAVAQMKAQRRFREMLLIAETCQGSTLL 275
>UniRef50_O66830 Cluster: Uncharacterized protein aq_555; n=1;
Aquifex aeolicus|Rep: Uncharacterized protein aq_555 -
Aquifex aeolicus
Length = 267
Score = 31.5 bits (68), Expect = 5.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 150 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEAN 248
+ R V+ H + T ++W K+W+ L+EAN
Sbjct: 152 KARKVVVESHALGKKTTLIQWYTKEWKELVEAN 184
>UniRef50_A5D5F4 Cluster: ABC-type cobalt transport system, permease
component CbiQ and related transporters; n=1;
Pelotomaculum thermopropionicum SI|Rep: ABC-type cobalt
transport system, permease component CbiQ and related
transporters - Pelotomaculum thermopropionicum SI
Length = 264
Score = 31.1 bits (67), Expect = 6.9
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = +1
Query: 94 LIVMRKGLSASSDLSLRMSRDVMFSAISTAWTSPL 198
L V R+GL+A +D+ LR+S ++ +++ T TSP+
Sbjct: 99 LKVTREGLAAGADIFLRLSLLILLASLLTYTTSPI 133
>UniRef50_A5AFT7 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 277
Score = 31.1 bits (67), Expect = 6.9
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -3
Query: 314 ILVGETDAENT*DISVSGLNVNVGF 240
+LVGE+D N +I V+GL VN+G+
Sbjct: 1 MLVGESDTSNEGEICVNGLCVNIGY 25
>UniRef50_UPI0000E47BA0 Cluster: PREDICTED: similar to ankyrin
2,3/unc44; n=20; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to ankyrin 2,3/unc44 -
Strongylocentrotus purpuratus
Length = 3259
Score = 30.7 bits (66), Expect = 9.1
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -3
Query: 362 ADLGMLS-VACLALAERILVGETDAENT*DISVSGLNVNVGFNQCLPFLYHPSELISGEV 186
AD+G ++ V L L++ G TD I G+N ++G N CL L+H S+ +G +
Sbjct: 260 ADIGNINDVGPLVLSKTSSEGYTDVVRY--IITKGVNYDLGDNDCLTPLHHASQ--NGHL 315
Query: 185 HAVE 174
VE
Sbjct: 316 QVVE 319
>UniRef50_Q5KVU2 Cluster: Putative uncharacterized protein GK2909;
n=1; Geobacillus kaustophilus|Rep: Putative
uncharacterized protein GK2909 - Geobacillus
kaustophilus
Length = 325
Score = 30.7 bits (66), Expect = 9.1
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = -3
Query: 272 SVSGLNVNVGFNQCLPFLYHPSELISGEVHAVEIAENITSLDILSDKSELAE 117
+VSG VN+ F Q L P + ++ ++H ++I EN+ L+ + + +L E
Sbjct: 105 AVSGKEVNLFFVQINSDLIAPLQKLNSQIHKLKIFENLKVLNEIPNPIKLLE 156
>UniRef50_Q41DV7 Cluster: Rod shape-determining protein MreC,
subtype precursor; n=1; Exiguobacterium sibiricum
255-15|Rep: Rod shape-determining protein MreC, subtype
precursor - Exiguobacterium sibiricum 255-15
Length = 294
Score = 30.7 bits (66), Expect = 9.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Frame = +3
Query: 12 VNRTQGTK-----IASEGLKGRVFEVSLAD--LQADSDAERSFRKFRLIAEDVQGRNVLC 170
+ + QG K + ++GL GRV + S +Q SD R+ +A+D +G+ V
Sbjct: 139 IGKEQGVKANMAVVTADGLVGRVIQTSAYTSLVQLLSDTSRT-NNVSAVADDTKGKGVFG 197
Query: 171 NFHGMDLTTDKLRW 212
G D T+ L++
Sbjct: 198 TIEGFDEETNLLKF 211
>UniRef50_Q5DG44 Cluster: SJCHGC04008 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04008 protein - Schistosoma
japonicum (Blood fluke)
Length = 224
Score = 30.7 bits (66), Expect = 9.1
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = -3
Query: 368 DCADLGMLSVACLALAERILVGETDAENT*DISVSGLNVNVGFNQCLPFLYHPSELISGE 189
DCAD+ ++S A +A +I E DA+ ++ LN F + L L ELI+
Sbjct: 107 DCADIKLVSDAIIANKNQINTNEEDAKALDEL----LNSEELFTRLLNVLLSIPELITQW 162
Query: 188 VHAVEIAENITSLDILSD 135
VH ++ + + I D
Sbjct: 163 VHVKDVKGKLYQIGINRD 180
>UniRef50_Q6C8L5 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 1149
Score = 30.7 bits (66), Expect = 9.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 162 HYVPGHPQR*V*TCGKTFPHHYQPGDQQGRPQKHAPLDP 46
H P HP + T +T HH+QP Q +PQ + P
Sbjct: 207 HNQPPHPSQVTQTQTQTHLHHHQPTPSQSQPQPPHGMSP 245
>UniRef50_Q6ZNA4 Cluster: E3 ubiquitin-protein ligase Arkadia; n=41;
Tetrapoda|Rep: E3 ubiquitin-protein ligase Arkadia -
Homo sapiens (Human)
Length = 994
Score = 30.7 bits (66), Expect = 9.1
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = -2
Query: 186 PCRGNCREHYVPGHPQR*V*TCGKTFPHHYQPGDQQGR-PQKHAPLDPQMQFLFPGC 19
PC G+ + H+ GHP +C + HH+Q P P+ P F P C
Sbjct: 486 PCGGSSQNHHALGHPHT---SCFQQHGHHFQHHHHHHHTPHPAVPVSP--SFSDPAC 537
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,534,452
Number of Sequences: 1657284
Number of extensions: 7448120
Number of successful extensions: 20573
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 20057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20550
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14019197511
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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