Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_P23
(376 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0043 + 5242496-5242554,5242673-5242778,5243586-5243723,524... 177 2e-45
02_02_0482 - 10819562-10819813,10820773-10820952,10822073-108221... 175 7e-45
12_02_0012 - 12309332-12310228,12311087-12311669,12311945-123120... 175 1e-44
03_05_0771 - 27588194-27588877 32 0.17
03_05_0772 - 27591175-27591864 29 0.90
03_05_0770 - 27583855-27584544 29 0.90
12_01_0014 + 105422-105520,105598-105725,105939-106101,106198-10... 28 2.7
11_01_0014 + 108647-108816,109704-109803,109891-110018,110232-11... 28 2.7
10_06_0143 - 11183574-11183761,11183989-11184344,11184437-111845... 27 3.6
09_04_0708 + 19648511-19648808,19649189-19649280,19650850-196510... 27 3.6
04_03_0181 - 12327281-12328620,12330922-12331015,12331079-123311... 27 3.6
11_05_0007 - 18324969-18325063,18326580-18326745,18327078-183272... 27 6.3
01_01_0718 - 5578959-5580761,5583683-5584160,5584239-5584267 27 6.3
06_03_0629 + 22920206-22920291,22920430-22920527,22920657-229207... 26 8.4
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 26 8.4
05_05_0050 + 21916020-21916489,21916906-21917380,21917472-21918278 26 8.4
04_01_0049 - 532308-532961 26 8.4
02_01_0455 + 3266123-3266258,3266348-3266670,3267083-3267661,326... 26 8.4
>03_02_0043 +
5242496-5242554,5242673-5242778,5243586-5243723,
5243794-5243979,5244075-5244275,5244362-5244460
Length = 262
Score = 177 bits (431), Expect = 2e-45
Identities = 86/122 (70%), Positives = 102/122 (83%)
Frame = +3
Query: 9 LVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMD 188
LV+RTQGTKIASEGLK RVFEVSLADLQ D D +++RK RL AEDVQG+NVL NF GM
Sbjct: 47 LVSRTQGTKIASEGLKHRVFEVSLADLQNDED--QAYRKIRLRAEDVQGKNVLTNFWGMS 104
Query: 189 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAI 368
TTDKLR +VKKWQTLIEA++DVKTTDGY+LR+FCIGFT + ++TCYAQ +Q+R I
Sbjct: 105 FTTDKLRSLVKKWQTLIEAHVDVKTTDGYMLRLFCIGFTKRRPNQVKRTCYAQASQIRQI 164
Query: 369 RK 374
R+
Sbjct: 165 RR 166
>02_02_0482 -
10819562-10819813,10820773-10820952,10822073-10822150,
10823056-10823256,10823365-10823550,10823646-10823783,
10824396-10824501,10824634-10824692
Length = 399
Score = 175 bits (427), Expect = 7e-45
Identities = 86/122 (70%), Positives = 101/122 (82%)
Frame = +3
Query: 9 LVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMD 188
LV+RTQGTKIASEGLK RVFEVSLADLQ D D +++RK RL AEDVQGRNVL NF GM
Sbjct: 47 LVSRTQGTKIASEGLKHRVFEVSLADLQNDED--QAYRKVRLRAEDVQGRNVLTNFWGMS 104
Query: 189 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAI 368
TTDKLR +VKKWQTLIEA++DVKTTD Y+LR+FCIGFT + ++TCYAQ +Q+R I
Sbjct: 105 FTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIGFTKRRPNQVKRTCYAQASQIRQI 164
Query: 369 RK 374
R+
Sbjct: 165 RR 166
>12_02_0012 -
12309332-12310228,12311087-12311669,12311945-12312051,
12313190-12313237,12315139-12315216,12315300-12315500,
12315612-12315797,12315870-12316007,12318311-12318416,
12318529-12318587
Length = 800
Score = 175 bits (425), Expect = 1e-44
Identities = 85/122 (69%), Positives = 101/122 (82%)
Frame = +3
Query: 9 LVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMD 188
LV+RTQGTKIASEGLK RVFEVSLADLQ D D +++RK RL AEDVQG+NVL NF GM
Sbjct: 47 LVSRTQGTKIASEGLKHRVFEVSLADLQNDED--QAYRKIRLRAEDVQGKNVLTNFWGMS 104
Query: 189 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAI 368
TTDKLR +VKKWQTLIEA++DVKTTD Y+LR+FCIGFT + ++TCYAQ +Q+R I
Sbjct: 105 FTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIGFTKRRPNQVKRTCYAQASQIRQI 164
Query: 369 RK 374
R+
Sbjct: 165 RR 166
>03_05_0771 - 27588194-27588877
Length = 227
Score = 31.9 bits (69), Expect = 0.17
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Frame = -3
Query: 353 GMLSVACLALAERILVGETDAENT*DISVSGLN--VNVGFNQCLP-------FLYHPSEL 201
G++ V L +L+ TDA+ D V+ LN V V + C P FL+
Sbjct: 9 GLVFVVLLLQQAPVLIRATDADPLQDFCVADLNSEVTVNGHACKPASAAGDEFLFSSKIA 68
Query: 200 ISGEVHAVEIAENITSLDI 144
G+V+A N+T LD+
Sbjct: 69 TGGDVNANPNGSNVTELDV 87
>03_05_0772 - 27591175-27591864
Length = 229
Score = 29.5 bits (63), Expect = 0.90
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Frame = -3
Query: 353 GMLSVACLALAERILVGETDAENT*DISVSGLN--VNVGFNQCLP-------FLYHPSEL 201
G++ V L +L+ TDA+ D V+ L+ V V + C P FL+
Sbjct: 11 GVVIVVLLLQQAPVLIRATDADPLQDFCVADLDSKVTVNGHACKPASAAGDEFLFSSKIA 70
Query: 200 ISGEVHAVEIAENITSLDI 144
G+V+A N+T LD+
Sbjct: 71 TGGDVNANPNGSNVTELDV 89
>03_05_0770 - 27583855-27584544
Length = 229
Score = 29.5 bits (63), Expect = 0.90
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Frame = -3
Query: 353 GMLSVACLALAERILVGETDAENT*DISVSGLN--VNVGFNQCLP-------FLYHPSEL 201
G++ V L +L+ TDA+ D V+ L+ V V + C P FL+
Sbjct: 11 GVVFVVLLLQQAPVLIRATDADPLQDFCVADLDSKVTVNGHACKPASAAGDEFLFSSKIA 70
Query: 200 ISGEVHAVEIAENITSLDI 144
G+V+A N+T LD+
Sbjct: 71 TGGDVNANPNGSNVTELDV 89
>12_01_0014 +
105422-105520,105598-105725,105939-106101,106198-106310,
106787-106825,107026-107109,107193-107241,107331-107422,
107680-107809,107906-107982,108058-109676,110024-110221,
110287-110825
Length = 1109
Score = 27.9 bits (59), Expect = 2.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 136 SLRMSRDVMFSAISTAWTSPLISSDG 213
SL S D+ FS I +AW ++SDG
Sbjct: 409 SLESSLDIDFSTIPSAWNDDDVTSDG 434
>11_01_0014 +
108647-108816,109704-109803,109891-110018,110232-110394,
110491-110603,111080-111118,111319-111402,111486-111534,
111624-111715,111999-112128,112225-112301,112377-113995,
114348-114545,114635-115173
Length = 1166
Score = 27.9 bits (59), Expect = 2.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 136 SLRMSRDVMFSAISTAWTSPLISSDG 213
SL S D+ FS I +AW ++SDG
Sbjct: 466 SLESSLDIDFSTIPSAWNDDDVTSDG 491
>10_06_0143 -
11183574-11183761,11183989-11184344,11184437-11184592,
11184825-11184994,11185906-11186064,11186856-11187164,
11187281-11187576,11187825-11188174,11188279-11188434,
11188634-11188803,11189289-11189447,11190702-11191010,
11191172-11191458,11191911-11192263,11192366-11192521,
11192680-11192849,11195800-11195958,11196937-11197254,
11197658-11197786
Length = 1449
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 141 EDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEAN 248
E +QG LCN +GM T+ LR + W T I N
Sbjct: 180 EKLQGEYQLCNGYGMKKATEVLR---EHWSTYILEN 212
>09_04_0708 +
19648511-19648808,19649189-19649280,19650850-19651000,
19651779-19651906,19652099-19652257,19652325-19652507,
19652978-19653178,19653269-19653289
Length = 410
Score = 27.5 bits (58), Expect = 3.6
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +3
Query: 63 VFEVSLADLQADS----DAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 230
+ ++++ADL S D +R+ ++ ++ E + N L DKL +V Q
Sbjct: 144 LMKIAIADLNNSSISLEDRQRALQELLILVEPIDNANDL----------DKLGGLVAVIQ 193
Query: 231 TLIEANIDVKTTDGYVL 281
L AN +++TT +VL
Sbjct: 194 DLNNANEEIRTTSAWVL 210
>04_03_0181 -
12327281-12328620,12330922-12331015,12331079-12331183,
12331404-12332592,12333268-12333461
Length = 973
Score = 27.5 bits (58), Expect = 3.6
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -3
Query: 209 SELISGEVHAVEIAENITSLDILSDKSELAER 114
+EL +G A +IA+NIT + D+S+LAE+
Sbjct: 390 NELHNGGQGADDIAKNITGIVKADDQSQLAEK 421
>11_05_0007 -
18324969-18325063,18326580-18326745,18327078-18327275,
18327377-18327643,18328070-18328129,18328767-18329033,
18329156-18329359,18329441-18331496,18332517-18333358
Length = 1384
Score = 26.6 bits (56), Expect = 6.3
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = -1
Query: 316 VSLLVKPMQKTRRTYPSVVLTSMLASISVCHFFTIHLSLSVVRSMPWKLQ 167
+ LL+ +K++ P + S + + H F H+SL + ++ W LQ
Sbjct: 699 LELLLSTWEKSKEK-PFLDCFSCMKKLESLHIFAPHISLDFMLNVDWTLQ 747
>01_01_0718 - 5578959-5580761,5583683-5584160,5584239-5584267
Length = 769
Score = 26.6 bits (56), Expect = 6.3
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 111 FPHHYQPGDQQGRPQKHAPLDPQMQFLFPG 22
+P+ P D P++H PLD +Q + G
Sbjct: 386 YPYVSNPEDPNHEPRQHEPLDSDVQVIDEG 415
>06_03_0629 +
22920206-22920291,22920430-22920527,22920657-22920796,
22921596-22921626,22922025-22922128,22922439-22922560,
22922651-22923050,22923245-22923268
Length = 334
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 284 CFLHRFHQQGYAQPTQDMLRSAYP 355
CFL+ GY TQD+++S YP
Sbjct: 174 CFLNLAFD-GYTNSTQDLIKSRYP 196
>05_07_0329 - 29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 12 VNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 113
+ QG KI+++GL+ + +L L+ D D +R
Sbjct: 991 IRAAQGVKISAQGLEHAIAGTALYVLKPDDDLDR 1024
>05_05_0050 + 21916020-21916489,21916906-21917380,21917472-21918278
Length = 583
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 252 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIR 371
+V TD ++R F +G N L R C+++ RAIR
Sbjct: 463 NVGETDDGLIR-FALGCENLRKLELRSCCFSEQALARAIR 501
>04_01_0049 - 532308-532961
Length = 217
Score = 26.2 bits (55), Expect = 8.4
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 132 LIAEDVQGRNVLCNFHG-MDLTTDKLRWMVKKWQTLIEA 245
L+ E V GR VLC F G L D + W + + +L++A
Sbjct: 73 LLLEIVTGRRVLCKFQGTFQLLVDWV-WRLHREGSLLDA 110
>02_01_0455 +
3266123-3266258,3266348-3266670,3267083-3267661,
3267866-3268336
Length = 502
Score = 26.2 bits (55), Expect = 8.4
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 34 KLHLRV*RGVFLR-SPLLISRLIVMRKGLSASSDLSLRMSRDVMFSAISTAWTSPLISSD 210
+L L V GV + SPL IS + ++ + L ++ ++ ++++T WTS +
Sbjct: 141 RLLLGVGVGVCIHASPLYISEMAPAQQRGMLNILFQLMITVGILSASLTTYWTSKIAGGW 200
Query: 211 GW 216
GW
Sbjct: 201 GW 202
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,714,447
Number of Sequences: 37544
Number of extensions: 210140
Number of successful extensions: 540
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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