Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_P22
(283 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform; n=... 67 6e-11
UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein... 66 2e-10
UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55; Eukar... 65 2e-10
UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38; Eukaryo... 64 4e-10
UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S riboso... 55 4e-07
UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2; E... 53 1e-06
UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n... 49 2e-05
UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillard... 46 1e-04
UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing ... 44 5e-04
UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9; Eukaryot... 43 0.001
UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S riboso... 43 0.002
UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4; Desulfu... 39 0.025
UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1; Encephal... 36 0.17
UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5; Sulfolo... 36 0.17
UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4; Pyrobac... 34 0.53
UniRef50_UPI000023D893 Cluster: hypothetical protein FG08254.1; ... 33 0.93
UniRef50_A4Z2F4 Cluster: Putative uncharacterized protein; n=2; ... 33 1.2
UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga ... 33 1.2
UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1; Methano... 33 1.2
UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_030011... 32 2.8
UniRef50_Q6UUK0 Cluster: Putative uncharacterized protein; n=1; ... 31 3.7
UniRef50_Q3E582 Cluster: GAF; n=1; Chloroflexus aurantiacus J-10... 31 4.9
UniRef50_Q1DU33 Cluster: Putative uncharacterized protein; n=1; ... 31 4.9
UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2; Methanobact... 31 4.9
UniRef50_Q3UVP4 Cluster: 12 days embryo embryonic body between d... 31 6.5
UniRef50_Q0LP42 Cluster: Amino acid adenylation; n=1; Herpetosip... 31 6.5
UniRef50_Q7N848 Cluster: Similarities with peptide synthetase li... 30 8.6
UniRef50_A5P4M7 Cluster: GCN5-related N-acetyltransferase; n=4; ... 30 8.6
UniRef50_A5BDL3 Cluster: Putative uncharacterized protein; n=1; ... 30 8.6
UniRef50_A6RFC2 Cluster: Predicted protein; n=1; Ajellomyces cap... 30 8.6
UniRef50_A2QRX5 Cluster: Contig An08c0170, complete genome; n=1;... 30 8.6
UniRef50_Q2FUC9 Cluster: Putative uncharacterized protein; n=2; ... 30 8.6
>UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform;
n=137; Eukaryota|Rep: 40S ribosomal protein S4, X
isoform - Homo sapiens (Human)
Length = 263
Score = 67.3 bits (157), Expect = 6e-11
Identities = 33/51 (64%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Frame = +3
Query: 129 VVIFLRNRLKYALTGMRCLD-CEATSHQVDGKVRTDPTYPAGFMDVVSIEK 278
++IFLRNRLKYALTG C ++DGKVRTD TYPAGFMDV+SI+K
Sbjct: 44 LIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDK 94
Score = 44.8 bits (101), Expect = 4e-04
Identities = 21/28 (75%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +2
Query: 47 PKAWMLDKLGGC-TRRASTGPHKLRECL 127
PK WMLDKL G R STGPHKLRECL
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECL 42
>UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein
S4, X isoform (LOC126235), mRNA; n=1; Takifugu
rubripes|Rep: similar to 40S ribosomal protein S4, X
isoform (LOC126235), mRNA - Takifugu rubripes
Length = 291
Score = 65.7 bits (153), Expect = 2e-10
Identities = 32/51 (62%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = +3
Query: 129 VVIFLRNRLKYALTGMRCLD-CEATSHQVDGKVRTDPTYPAGFMDVVSIEK 278
++IFLRNRLKYALTG C ++DGKVRTD TYP GFMDV+SI+K
Sbjct: 44 LIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPTGFMDVISIDK 94
Score = 44.8 bits (101), Expect = 4e-04
Identities = 21/28 (75%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +2
Query: 47 PKAWMLDKLGGC-TRRASTGPHKLRECL 127
PK WMLDKL G R STGPHKLRECL
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECL 42
>UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55;
Eukaryota|Rep: 40S ribosomal protein S4-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 262
Score = 65.3 bits (152), Expect = 2e-10
Identities = 33/51 (64%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = +3
Query: 129 VVIFLRNRLKYALTGMRCLDCEATSH-QVDGKVRTDPTYPAGFMDVVSIEK 278
+V+ +RNRLKYALT + H QVDGKVRTD TYPAGFMDVVSI K
Sbjct: 44 LVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPK 94
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/28 (67%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +2
Query: 47 PKAWMLDKLGGC-TRRASTGPHKLRECL 127
PK WMLDKLGG + S+GPHK RECL
Sbjct: 15 PKHWMLDKLGGAFAPKPSSGPHKSRECL 42
>UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38;
Eukaryota|Rep: 40S ribosomal protein S4 - Drosophila
melanogaster (Fruit fly)
Length = 261
Score = 64.5 bits (150), Expect = 4e-10
Identities = 31/51 (60%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = +3
Query: 129 VVIFLRNRLKYALTGMRCLDCEATSH-QVDGKVRTDPTYPAGFMDVVSIEK 278
++IFLRNRLKYAL G +VDGKVRTDPTYPAG+MDV+++EK
Sbjct: 44 LLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEK 94
Score = 46.4 bits (105), Expect = 1e-04
Identities = 22/28 (78%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 47 PKAWMLDKLGGC-TRRASTGPHKLRECL 127
PKAWMLDKLGG R STGPHKLRE L
Sbjct: 15 PKAWMLDKLGGVFAPRPSTGPHKLRESL 42
>UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=1; Macaca mulatta|Rep:
PREDICTED: similar to 40S ribosomal protein S4, X
isoform - Macaca mulatta
Length = 244
Score = 54.8 bits (126), Expect = 4e-07
Identities = 40/94 (42%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Frame = +3
Query: 12 AEEFG-QEHL--ALRLKHGCWTSWAGVRAG-PRRVPTSCANACVVIFLRNRLKYALTGMR 179
A FG ++HL L+H GV A P P IFLRNRLKYALTG
Sbjct: 11 AVAFGPKQHLKRVAALQHWMLDKLTGVFAARPSTGPHKLRECLPHIFLRNRLKYALTGDE 70
Query: 180 CLD-CEATSHQVDGKVRTDPTYPAGFMDVVSIEK 278
C +VDGK+RTD P MDV+SI+K
Sbjct: 71 VKKICMQWFIKVDGKIRTDNNLPYWIMDVISIDK 104
>UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S4 - Entamoeba histolytica HM-1:IMSS
Length = 326
Score = 52.8 bits (121), Expect = 1e-06
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +3
Query: 129 VVIFLRNRLKYALTGMRC-LDCEATSHQVDGKVRTDPTYPAGFMDVVSIEK 278
+++ LRNRL YAL G + + + ++DGK+RTD YP GFMDV+SI +
Sbjct: 44 LILILRNRLNYALNGREVTMIVKNRTIKIDGKIRTDTRYPVGFMDVLSIPR 94
Score = 34.3 bits (75), Expect = 0.53
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 47 PKAWMLDKLGGC-TRRASTGPHKLRECL 127
P WML KLGG + S GPH ++ECL
Sbjct: 15 PHHWMLSKLGGTFAPKPSHGPHGMKECL 42
>UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n=4;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein
S4-C, putative - Trichomonas vaginalis G3
Length = 269
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +3
Query: 135 IFLRNRLKYALTGMRCLDC-EATSHQVDGKVRTDPTYPAGFMDVVSIEKA 281
IFLR+RLKYALT + + +VDGKVRT+ YP G MDV+ + K+
Sbjct: 60 IFLRDRLKYALTAKEAVAIVKRRLVKVDGKVRTNYRYPTGLMDVIELGKS 109
Score = 34.3 bits (75), Expect = 0.53
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 47 PKAWMLDKLGG-CTRRASTGPHKLRECL 127
P W+L K G STGPHKLRECL
Sbjct: 29 PHHWLLAKSAGKFASHPSTGPHKLRECL 56
>UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillardia
theta|Rep: 40S ribosomal protein S4 - Guillardia theta
(Cryptomonas phi)
Length = 257
Score = 46.4 bits (105), Expect = 1e-04
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +3
Query: 129 VVIFLRNRLKYALTGMRCLDC-EATSHQVDGKVRTDPTYPAGFMDVVSIE 275
+VI +RN+LKY+ L+ + VDGKVR D +PAG MDV+SI+
Sbjct: 44 LVIVIRNKLKYSTNQRESLNILKKNEIYVDGKVRADKNFPAGVMDVISIK 93
Score = 33.5 bits (73), Expect = 0.93
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +2
Query: 47 PKAWMLDKLGGC-TRRASTGPHK 112
PK W+L+KLGG R+S+GPHK
Sbjct: 15 PKKWLLNKLGGIWAPRSSSGPHK 37
>UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal family S4e containing protein - Tetrahymena
thermophila SB210
Length = 370
Score = 44.4 bits (100), Expect = 5e-04
Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +3
Query: 135 IFLRNRLKYALTGMRC---LDCEATSHQVDGKVRTDPTYPAGFMDVVSIEK 278
+ L+ RL YAL G L+ + + VDGKVR D YP G MDVV IEK
Sbjct: 156 VLLKERLNYALNGRDVTLILNDKEQNVFVDGKVRRDKGYPTGLMDVVRIEK 206
Score = 26.2 bits (55), Expect(2) = 3.3
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +2
Query: 47 PKAWMLDKLGG 79
PK+WML+KLGG
Sbjct: 96 PKSWMLNKLGG 106
Score = 24.2 bits (50), Expect(2) = 3.3
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 89 RASTGPHKLRECL 127
R S GPHKLRE L
Sbjct: 140 RPSQGPHKLRESL 152
>UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9;
Eukaryota|Rep: 40S ribosomal protein S4 - Leishmania
major
Length = 273
Score = 43.2 bits (97), Expect = 0.001
Identities = 30/67 (44%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 84 RAGPRRVPTSCANACVVIFLRNRLKYALTGMR--CLDCEATSHQVDGKVRTDPTYPAGFM 257
R GP ++ C V+I RNRLKYAL + + H VD R D YPAGFM
Sbjct: 29 RPGPHKL-RECLPLLVII--RNRLKYALNAREGEMILRQGLVH-VDNHPRRDGKYPAGFM 84
Query: 258 DVVSIEK 278
DVV I K
Sbjct: 85 DVVEIPK 91
Score = 37.9 bits (84), Expect = 0.043
Identities = 18/28 (64%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 47 PKAWMLDKLGGC-TRRASTGPHKLRECL 127
PK WML KL G R GPHKLRECL
Sbjct: 12 PKDWMLSKLTGVFAPRPRPGPHKLRECL 39
>UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=3; Eutheria|Rep: PREDICTED:
similar to 40S ribosomal protein S4, X isoform - Canis
familiaris
Length = 240
Score = 42.7 bits (96), Expect = 0.002
Identities = 20/28 (71%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +2
Query: 47 PKAWMLDKLGGC-TRRASTGPHKLRECL 127
PK WMLDKL G STGPHKLRECL
Sbjct: 15 PKHWMLDKLTGVFAPHPSTGPHKLRECL 42
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +3
Query: 129 VVIFLRNRLKYALTG 173
++IFLRNRLKYALTG
Sbjct: 44 LIIFLRNRLKYALTG 58
>UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4;
Desulfurococcales|Rep: 30S ribosomal protein S4e -
Aeropyrum pernix
Length = 253
Score = 38.7 bits (86), Expect = 0.025
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 129 VVIFLRNRLKYALTGMRCLDCEATSH-QVDGKVRTDPTYPAGFMDVVSI 272
+++ +RN L YA T + H +VDG VR D +P GFMDV+ +
Sbjct: 45 LLLIVRNVLGYAQTAREARKLISEGHFRVDGVVRKDYKFPVGFMDVIEV 93
>UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S4 -
Encephalitozoon cuniculi
Length = 268
Score = 35.9 bits (79), Expect = 0.17
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 47 PKAWMLDKLGGC-TRRASTGPHKLRECL 127
PK+WMLDK GG ++GPHK EC+
Sbjct: 15 PKSWMLDKQGGTFALMPASGPHKKTECI 42
Score = 33.9 bits (74), Expect = 0.70
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 207 QVDGKVRTDPTYPAGFMDVVSIEK 278
+V+G+VRT+ +P G DVVSIEK
Sbjct: 71 KVNGRVRTNSHFPVGLFDVVSIEK 94
>UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S4e -
Sulfolobus acidocaldarius
Length = 244
Score = 35.9 bits (79), Expect = 0.17
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 84 RAGPRRVPTSCANACVVIFLRNRLKYALTGMRCL-DCEATSHQVDGKVRTDPTYPAGFMD 260
RAGP ++ S A ++ + + R + D + VDGKVR D YP G MD
Sbjct: 27 RAGPHKIQESVPLAILLKYYLKAVDTTREAKRIIFDGKVL---VDGKVRRDYKYPVGLMD 83
Query: 261 VVSIEKA 281
VV I A
Sbjct: 84 VVEIPSA 90
>UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S4e - Pyrobaculum
aerophilum
Length = 238
Score = 34.3 bits (75), Expect = 0.53
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +3
Query: 45 RLKHGCWTSWAGVRAGPRRVPTSCANAC-VVIFLRNRLKYALTGMRCLDCEATSH-QVDG 218
R K G W VR P P S A + + + +R+ LKYA T + + +VDG
Sbjct: 17 RKKGGVWV----VRPSPG--PHSLAYSLPLALIIRDVLKYAKTMHEARYIISRGYVKVDG 70
Query: 219 KVRTDPTYPAGFMDVVSI 272
VR D +P G MDV+ I
Sbjct: 71 VVRRDYKFPVGLMDVIEI 88
>UniRef50_UPI000023D893 Cluster: hypothetical protein FG08254.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG08254.1 - Gibberella zeae PH-1
Length = 304
Score = 33.5 bits (73), Expect = 0.93
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 47 PKAWMLDKLGGCTRRASTGPHKLRECLRSDLPAKS 151
P W++DKL G T R + P KL + + D+ A+S
Sbjct: 157 PLGWIVDKLLGTTARDTEHPEKLEDMMDKDMTARS 191
>UniRef50_A4Z2F4 Cluster: Putative uncharacterized protein; n=2;
Bradyrhizobium|Rep: Putative uncharacterized protein -
Bradyrhizobium sp. (strain ORS278)
Length = 275
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 54 HGCWTSWAGVRAGPRRVPTSCANACVVIFLRNRLKYALTG 173
HG T+ V AG R P CA+ACV F + +Y L G
Sbjct: 164 HGLATAVGVVDAGGRVRPGFCASACVFTFAGGQTRYGLDG 203
>UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S4E -
Caldivirga maquilingensis IC-167
Length = 237
Score = 33.1 bits (72), Expect = 1.2
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 207 QVDGKVRTDPTYPAGFMDVVSI 272
+VDGKVR D YP G MDV+ +
Sbjct: 66 KVDGKVRRDYKYPVGLMDVIEL 87
>UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S4e -
Methanopyrus kandleri
Length = 260
Score = 33.1 bits (72), Expect = 1.2
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 90 GPRRVPTSCANACVVIFLRNRLKYALTGMRCLDCEATSH-QVDGKVRTDPTYPAGFMDVV 266
GP + TS ++I +R+ L YA VDG VR +P +P G MDVV
Sbjct: 38 GPHTMDTSVP---LLILVRDMLGYADYAREARKIITRGEIYVDGVVRKEPKFPVGIMDVV 94
Query: 267 SIEK 278
I +
Sbjct: 95 EIPR 98
>UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_03001139;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001139 - Ferroplasma acidarmanus fer1
Length = 241
Score = 31.9 bits (69), Expect = 2.8
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +3
Query: 207 QVDGKVRTDPTYPAGFMDVVSIE 275
+VDG++ D +P GFMDV+SI+
Sbjct: 68 KVDGRIVKDRRFPVGFMDVLSID 90
>UniRef50_Q6UUK0 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 127
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +3
Query: 36 LALRLKHGCWTSWAGVRAGPRRVPTSCANACVVIFLRNRLKYALTGMRCLDCEATSH 206
+A LK G +W G R G R+PT+ + +V L L+ ++ + ++ E+ H
Sbjct: 66 IAAELKSGRTDNWRGTRPGNDRIPTAAGHVYMVFDL--ELRSSMEVLTAVEIESIEH 120
>UniRef50_Q3E582 Cluster: GAF; n=1; Chloroflexus aurantiacus
J-10-fl|Rep: GAF - Chloroflexus aurantiacus J-10-fl
Length = 973
Score = 31.1 bits (67), Expect = 4.9
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = -1
Query: 118 AQLVGTRRGPARTPAQLVQHPCFRRNAKCSCPNSSAR 8
A+ V RR P+ P L Q P FRR A SC S R
Sbjct: 902 ARCVILRREPSEPPFMLNQTPNFRRRAVSSCVGSRCR 938
>UniRef50_Q1DU33 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 1037
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -2
Query: 150 DFAGRSLRKHSRSLWGPVEARRVHPPSLSNI-HALGVTLSAPVRIP 16
DF RSL K+SRS + +EA + P + I H VTL P +P
Sbjct: 835 DFLTRSLPKYSRSFFSLIEAPQDKPEVVQAILHFTLVTLKGPDTLP 880
>UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2;
Methanobacteriaceae|Rep: Ribosomal protein S4e -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 242
Score = 31.1 bits (67), Expect = 4.9
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 210 VDGKVRTDPTYPAGFMDVVSIEK 278
VDG+V D +P GFMD++ I K
Sbjct: 73 VDGRVIKDYKFPVGFMDIIEIPK 95
>UniRef50_Q3UVP4 Cluster: 12 days embryo embryonic body between
diaphragm region and neck cDNA, RIKEN full-length
enriched library, clone:9430059O11 product:hypothetical
protein, full insert sequence; n=1; Mus musculus|Rep: 12
days embryo embryonic body between diaphragm region and
neck cDNA, RIKEN full-length enriched library,
clone:9430059O11 product:hypothetical protein, full
insert sequence - Mus musculus (Mouse)
Length = 157
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 24 GQEHLALRLKHGC---WTSWAGVRAGPRRVPTSCANACVVIFLRNR 152
GQ+ L LRL HGC T+ AG R RVP A + R++
Sbjct: 18 GQQRLTLRLAHGCQLFLTARAGTRRAVLRVPGEVAALLPAAYWRHQ 63
>UniRef50_Q0LP42 Cluster: Amino acid adenylation; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Amino acid adenylation -
Herpetosiphon aurantiacus ATCC 23779
Length = 2883
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 50 KAWMLDKLGG-CTRRASTGPHKLRECLRSDLPAKSAQVRAHRHEVLR 187
+ W LD+L G T +G +++ + +L A++ Q+ RHE+LR
Sbjct: 83 RLWFLDQLEGQSTAYNLSGCFEIQGAFKPELLARALQLSLERHEILR 129
>UniRef50_Q7N848 Cluster: Similarities with peptide synthetase like
pristinamycin I synthase 3; n=3; Photorhabdus
luminescens subsp. laumondii|Rep: Similarities with
peptide synthetase like pristinamycin I synthase 3 -
Photorhabdus luminescens subsp. laumondii
Length = 2009
Score = 30.3 bits (65), Expect = 8.6
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 50 KAWMLDKLGGCTRRAST-GPHKLRECLRSDLPAKSAQVRAHRHEVLR 187
+ W +D+L G +R+ + G +LRE + + + + RHEVLR
Sbjct: 88 RLWFIDQLDGGSRQYNCMGDFRLRESINIEAFEAAVKALLERHEVLR 134
>UniRef50_A5P4M7 Cluster: GCN5-related N-acetyltransferase; n=4;
Alphaproteobacteria|Rep: GCN5-related
N-acetyltransferase - Methylobacterium sp. 4-46
Length = 611
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -3
Query: 179 PHAGER-VLEPISQEDHYASIRAACGDPSRPGAYTRPACP 63
P AG+R + EP S +R A G RPG RPA P
Sbjct: 327 PAAGDRRIREPASGRPGREHLRGAAGGERRPGRGARPAEP 366
>UniRef50_A5BDL3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 848
Score = 30.3 bits (65), Expect = 8.6
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +2
Query: 80 CTRRASTGPHKLRECLRSDLPAKSAQVRAHRH 175
CT STG HK RE LR+ K R RH
Sbjct: 36 CTSFMSTGKHKYREALRTISQEKMMSERFRRH 67
>UniRef50_A6RFC2 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1618
Score = 30.3 bits (65), Expect = 8.6
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +2
Query: 83 TRRASTGPHKLRECLRSDLPAKSAQVRAHRHEVLRL*SNVSSSGRES 223
TR AS H+LR S KS+QV RH L +++++ GR S
Sbjct: 1103 TRSASKSRHRLRNRSGSWAGDKSSQVTTRRHSPDPLYNSIATRGRSS 1149
>UniRef50_A2QRX5 Cluster: Contig An08c0170, complete genome; n=1;
Aspergillus niger|Rep: Contig An08c0170, complete genome
- Aspergillus niger
Length = 1595
Score = 30.3 bits (65), Expect = 8.6
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = -2
Query: 207 DETLLHNLSTSCR*ART*ADFAGRSLRKH--SRSLWGPVEARRV-HPPSLSNIHALGVTL 37
DE LH ++ + A T D S R+H SRS P A + P +L NI A +
Sbjct: 868 DERKLHTITDALLDASTTIDNRPDSRRRHMRSRSQRDPGAALTIPRPSALDNIRAENSPV 927
Query: 36 SAPVRIPQPGG 4
S+P+ PGG
Sbjct: 928 SSPI-ASSPGG 937
>UniRef50_Q2FUC9 Cluster: Putative uncharacterized protein; n=2;
Methanomicrobia|Rep: Putative uncharacterized protein -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 256
Score = 30.3 bits (65), Expect = 8.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 111 SCANACVVIFLRNRLKYALTGMRCLD 188
+C ++C++ FL NRL Y L C D
Sbjct: 174 TCVDSCIIPFLENRLNYGLGCYGCRD 199
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 332,755,173
Number of Sequences: 1657284
Number of extensions: 6332493
Number of successful extensions: 20056
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 19463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20035
length of database: 575,637,011
effective HSP length: 71
effective length of database: 457,969,847
effective search space used: 10075336634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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