Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_P19
(192 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 120 3e-29
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 116 4e-28
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 74 2e-15
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 53 6e-09
SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces ... 27 0.34
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 26 0.60
SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr... 25 1.4
SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1 |Schizosa... 23 4.2
SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces ... 23 5.6
SPAC1687.11 |spb1||rRNA methyltransferase Spb1 |Schizosaccharomy... 23 7.4
SPAC2E1P3.02c |amt3||ammonium transporter Amt3|Schizosaccharomyc... 22 9.8
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 22 9.8
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 120 bits (289), Expect = 3e-29
Identities = 50/63 (79%), Positives = 59/63 (93%)
Frame = +2
Query: 2 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 181
F+TFFSETG GK+VPR+++VDLEP V+D+VRTG YR LFHPEQLITGKEDA+NNYARGHY
Sbjct: 49 FSTFFSETGQGKYVPRSIYVDLEPNVIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHY 108
Query: 182 TIG 190
T+G
Sbjct: 109 TVG 111
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 116 bits (279), Expect = 4e-28
Identities = 47/63 (74%), Positives = 57/63 (90%)
Frame = +2
Query: 2 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 181
F TFFSETG GK VPR+++VDLEP V+D+VRTG Y+ LFHPEQ++TGKEDA+NNYARGHY
Sbjct: 53 FGTFFSETGQGKFVPRSIYVDLEPNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHY 112
Query: 182 TIG 190
T+G
Sbjct: 113 TVG 115
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 74.1 bits (174), Expect = 2e-15
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = +2
Query: 5 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 184
N +F+E GK+VPRAV VDLEP +D V++G + LF P+ +I G+ A N +A+GHYT
Sbjct: 48 NVYFNEAAGGKYVPRAVLVDLEPGTMDAVKSGKFGNLFRPDNIIYGQSGAGNIWAKGHYT 107
Query: 185 IG 190
G
Sbjct: 108 EG 109
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 52.8 bits (121), Expect = 6e-09
Identities = 22/60 (36%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Frame = +2
Query: 5 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGH 178
+ FF ++ +++PRA+ +DLEP VV+ + + TY L++PE ++ K A NN+A G+
Sbjct: 49 DVFFYQSDDTRYIPRAILIDLEPRVVNNILSDTYGSLYNPENILITKNGGGAGNNWANGY 108
>SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 285
Score = 27.1 bits (57), Expect = 0.34
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 27 ELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV 176
E+ F VP +S LNP S +TD +++ N+ + R+ T +++
Sbjct: 218 EVKDLFYVPLTSFLNPKHQKISRFRNTDLLYVEFNIDKIPRIWGITAVIL 267
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.2 bits (55), Expect = 0.60
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 182
ST ++ L ++ P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 1269 STPITSSTALNTSIPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNT 1328
Score = 25.4 bits (53), Expect = 1.0
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 182
ST ++ L ++ P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 501 STPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNT 560
Score = 25.4 bits (53), Expect = 1.0
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 182
ST ++ L ++ P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 2613 STPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNT 2672
Score = 25.4 bits (53), Expect = 1.0
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 182
ST ++ L ++ P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 2841 STPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNT 2900
Score = 25.4 bits (53), Expect = 1.0
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 182
ST ++ L ++ P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 2937 STPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNT 2996
Score = 25.0 bits (52), Expect = 1.4
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 182
ST ++ L ++ P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 993 STPITSSSVLNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTPITSSTVVNT 1052
Score = 24.6 bits (51), Expect = 1.8
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 182
ST ++ L ++ P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 1773 STPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNT 1832
Score = 24.6 bits (51), Expect = 1.8
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVT 179
ST ++ L S+ P+ SSS+LN +T S + +T S I ++ L P T+ VV
Sbjct: 3225 STAITSSSVLNSSTPITSSSVLNSSTPITSSTVVNT-STPITSSSVLNSSTPITSSTVVN 3283
Query: 180 T 182
T
Sbjct: 3284 T 3284
Score = 24.2 bits (50), Expect = 2.4
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 182
ST ++ + S+ P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 837 STPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNT 896
Score = 24.2 bits (50), Expect = 2.4
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 182
ST ++ + S+ P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 2445 STPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNT 2504
Score = 23.8 bits (49), Expect = 3.2
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 182
ST ++ L ++ P+ SSS+LN S+ S I ++ L P T+ VV T
Sbjct: 3201 STPITSSTTLNTSTPITSSSVLNSSTAITSSSVLNSSTPITSSSVLNSSTPITSSTVVNT 3260
Score = 23.8 bits (49), Expect = 3.2
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV-- 176
ST ++ L ++ P+ SSS+LN S+ S I ++ +L P T+ VV
Sbjct: 3381 STPITSSTALNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSTVVNS 3440
Query: 177 TTPL 188
+TP+
Sbjct: 3441 STPI 3444
Score = 23.4 bits (48), Expect = 4.2
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV-- 176
ST ++ L S+ P+ SSSILN S+ S I ++ +L P T+ V+
Sbjct: 405 STPITSSSVLNSSTPITSSSILNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNS 464
Query: 177 TTPL 188
+TP+
Sbjct: 465 STPI 468
Score = 23.4 bits (48), Expect = 4.2
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT--TMLVV 176
ST ++ L S+ P+ SSS+LN S+ A S I ++ L P T T L
Sbjct: 633 STPITSSSVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNT 692
Query: 177 TTPL 188
+TP+
Sbjct: 693 STPI 696
Score = 23.4 bits (48), Expect = 4.2
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT--TMLVV 176
ST ++ L ++ P+ SSS+LN S+ A S I ++ L P T T L
Sbjct: 681 STPITSSTALNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTPITSSTALNT 740
Query: 177 TTPL 188
+TP+
Sbjct: 741 STPI 744
Score = 23.4 bits (48), Expect = 4.2
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV-- 176
ST ++ L S+ P+ SSS+LN S+ S I ++ +L P T+ V+
Sbjct: 981 STPITSSSVLNSSTPITSSSVLNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNS 1040
Query: 177 TTPL 188
+TP+
Sbjct: 1041 STPI 1044
Score = 23.4 bits (48), Expect = 4.2
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 182
ST ++ L ++ P+ SSS+LN S+ S I ++ L P T+ VV T
Sbjct: 1065 STPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNT 1124
Score = 23.4 bits (48), Expect = 4.2
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV-- 176
ST ++ L S+ P+ SSS+LN S+ S I ++ +L +P T+ V+
Sbjct: 1233 STPITSSSILNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSIPITSSSVLNS 1292
Query: 177 TTPL 188
+TP+
Sbjct: 1293 STPI 1296
Score = 23.4 bits (48), Expect = 4.2
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVT 179
ST ++ L S+ P+ SSS+LN +T S + +T S I ++ + P T+ VV
Sbjct: 1389 STPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNT-STPITSSTVVNSSTPITSSTVVN 1447
Query: 180 T 182
T
Sbjct: 1448 T 1448
Score = 23.4 bits (48), Expect = 4.2
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV-- 176
ST ++ L ++ P+ SSS+LN S+ S I ++ +L P T+ VV
Sbjct: 1605 STPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSPPITSSTVVNS 1664
Query: 177 TTPL 188
+TP+
Sbjct: 1665 STPI 1668
Score = 23.4 bits (48), Expect = 4.2
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVT 179
ST ++ L ++ P+ SSS+LN +T S++ +T S I ++ L P T+ VV
Sbjct: 1965 STPITSSTALNTSTPITSSSVLNSSTPITSSSVLNT-STPITSSSVLNSSTPITSSTVVN 2023
Query: 180 T 182
T
Sbjct: 2024 T 2024
Score = 23.4 bits (48), Expect = 4.2
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVT 179
ST ++ L S+ P+ SSS+LN +T S + +T S I ++ + P T+ VV
Sbjct: 2229 STPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNT-STPITSSTVVNSSTPITSSTVVN 2287
Query: 180 T 182
T
Sbjct: 2288 T 2288
Score = 23.4 bits (48), Expect = 4.2
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVT 179
ST ++ L ++ P+ SSS+LN +T S + +T S I ++ L P T+ VV
Sbjct: 2301 STPITSSTALNTSTPITSSSVLNSSTPITSSTVVNT-STPITSSSVLNSSTPITSSTVVN 2359
Query: 180 T 182
T
Sbjct: 2360 T 2360
Score = 23.4 bits (48), Expect = 4.2
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVT 179
ST ++ L ++ P+ SSS+LN +T S + +T S I ++ L P T+ VV
Sbjct: 2709 STPITSSTALNTSTPITSSSVLNSSTPITSSTVVNT-STPITSSSVLNSSTPITSSTVVN 2767
Query: 180 T 182
T
Sbjct: 2768 T 2768
Score = 23.4 bits (48), Expect = 4.2
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV-- 176
ST ++ L S+ PV SSS+LN S+ S I ++ +L P T+ V+
Sbjct: 3345 STAITSSSILNSSTPVTSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNS 3404
Query: 177 TTPL 188
+TP+
Sbjct: 3405 STPI 3408
Score = 23.0 bits (47), Expect = 5.6
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV- 176
ST ++ L S+ P+ SSS+LN +T S + +T S I ++ +L P T+ V+
Sbjct: 1089 STPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNT-STPITSSTALNTSTPITSSSVLN 1147
Query: 177 -TTPL 188
+TP+
Sbjct: 1148 SSTPI 1152
Score = 23.0 bits (47), Expect = 5.6
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV-- 176
ST ++ + S+ P+ SSS+LN S+ A S I ++ L P T+ VV
Sbjct: 2133 STPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNS 2192
Query: 177 TTPL 188
+TP+
Sbjct: 2193 STPI 2196
Score = 23.0 bits (47), Expect = 5.6
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 182
ST ++ L S+ P+ SSSILN S+ S I ++ +L P T+ V+ +
Sbjct: 3117 STAITSSSILNSSTPITSSSILNSSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNS 3176
Score = 22.6 bits (46), Expect = 7.4
Identities = 16/64 (25%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNN-LSLVRRMPQTTMLVV 176
ST+ ++ + S+ P+ SSS+LN +T S++ +T + ++ L+ + +++L
Sbjct: 369 STQITSPTAVNSSTPITSSSVLNSSTPITSSSILNTSTPITSSSVLNSSTPITSSSILNS 428
Query: 177 TTPL 188
+TP+
Sbjct: 429 STPI 432
Score = 22.6 bits (46), Expect = 7.4
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNN-LSLVRRMPQTTMLVV 176
ST ++ L S+ P+ SSSILN +T S++ ++ + ++ L+ + +T+L
Sbjct: 381 STPITSSSVLNSSTPITSSSILNTSTPITSSSVLNSSTPITSSSILNSSTPITSSTVLNS 440
Query: 177 TTPL 188
+TP+
Sbjct: 441 STPI 444
Score = 22.6 bits (46), Expect = 7.4
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV-- 176
ST ++ L S+ P+ SSS+LN S+ A S I ++ L P T+ V+
Sbjct: 597 STPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNS 656
Query: 177 TTPL 188
+TP+
Sbjct: 657 STPI 660
Score = 22.6 bits (46), Expect = 7.4
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 182
ST ++ L ++ P+ SSS+LN S+ S I ++ L P T+ VV T
Sbjct: 729 STPITSSTALNTSTPITSSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPITSSTVVNT 788
Score = 22.6 bits (46), Expect = 7.4
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNN-LSLVRRMPQTTMLVV 176
ST ++ L S+ P+ SSS+LN +T S + +T + ++ ++ + +T L
Sbjct: 1533 STPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVVNSSTPITSSTALNT 1592
Query: 177 TTPL 188
+TP+
Sbjct: 1593 STPI 1596
Score = 22.6 bits (46), Expect = 7.4
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT--TMLVV 176
ST ++ L ++ P+ SSS+LN S+ A S I ++ L P T T+L
Sbjct: 1581 STPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNS 1640
Query: 177 TTPL 188
+TP+
Sbjct: 1641 STPI 1644
Score = 22.6 bits (46), Expect = 7.4
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT--TMLVV 176
ST ++ L ++ P+ SSS+LN S+ A S I ++ L P T T L
Sbjct: 1749 STPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNT 1808
Query: 177 TTPL 188
+TP+
Sbjct: 1809 STPI 1812
Score = 22.6 bits (46), Expect = 7.4
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT--TMLVV 176
ST ++ L ++ P+ SSS+LN S+ A S I ++ L P T T+L
Sbjct: 1845 STPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNS 1904
Query: 177 TTPL 188
+TP+
Sbjct: 1905 STPI 1908
Score = 22.6 bits (46), Expect = 7.4
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 182
ST ++ + S+ P+ SSS+LN S+ A S I ++ L P T+ V+ T
Sbjct: 1941 STPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNT 2000
Score = 22.6 bits (46), Expect = 7.4
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT--TMLVV 176
ST ++ L ++ P+ SSS+LN S+ A S I ++ L P T T+L
Sbjct: 2037 STPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNS 2096
Query: 177 TTPL 188
+TP+
Sbjct: 2097 STPI 2100
Score = 22.6 bits (46), Expect = 7.4
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 182
ST ++ L ++ P+ SSS+LN S+ S I ++ + P T+ VV T
Sbjct: 2157 STPITSSTALNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNT 2216
Score = 22.6 bits (46), Expect = 7.4
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNN-LSLVRRMPQTTMLVV 176
ST ++ L S+ P+ SSS+LN +T S + ++ + ++ L+ + +T L
Sbjct: 2421 STSITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITSSTALNT 2480
Query: 177 TTPL 188
+TP+
Sbjct: 2481 STPI 2484
Score = 22.6 bits (46), Expect = 7.4
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 182
ST ++ L S+ P+ SSS+LN S+ A S I ++ L P T+ + T
Sbjct: 2817 STPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNT 2876
Score = 22.2 bits (45), Expect = 9.8
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNN-LSLVRRMPQTTMLVV 176
ST ++ L S+ P+ SSS+LN +T S + +T + + ++ + +T L
Sbjct: 453 STPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNT 512
Query: 177 TTPL 188
+TP+
Sbjct: 513 STPI 516
Score = 22.2 bits (45), Expect = 9.8
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV-- 176
ST ++ L ++ P+ SSS+LN S+ S I ++ +L P T+ V+
Sbjct: 1869 STPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNS 1928
Query: 177 TTPL 188
+TP+
Sbjct: 1929 STPI 1932
Score = 22.2 bits (45), Expect = 9.8
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNN-LSLVRRMPQTTMLVV 176
ST ++ L S+ P+ SSS+LN +T S + ++ + ++ L+ + +T L
Sbjct: 1917 STPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITSSTALNT 1976
Query: 177 TTPL 188
+TP+
Sbjct: 1977 STPI 1980
Score = 22.2 bits (45), Expect = 9.8
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV-- 176
ST ++ L ++ P+ SSS+LN S+ S I ++ +L P T+ V+
Sbjct: 2061 STPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNS 2120
Query: 177 TTPL 188
+TP+
Sbjct: 2121 STPI 2124
Score = 22.2 bits (45), Expect = 9.8
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNN-LSLVRRMPQTTMLVV 176
ST ++ L S+ P+ SSS+LN +T S + ++ + ++ L+ + +T L
Sbjct: 2109 STPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITSSTALNT 2168
Query: 177 TTPL 188
+TP+
Sbjct: 2169 STPI 2172
Score = 22.2 bits (45), Expect = 9.8
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNN-LSLVRRMPQTTMLVV 176
ST ++ L S+ P+ SSS+LN +T S + +T + + ++ + +T L
Sbjct: 2565 STPITSLTALNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNT 2624
Query: 177 TTPL 188
+TP+
Sbjct: 2625 STPI 2628
Score = 22.2 bits (45), Expect = 9.8
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNN-LSLVRRMPQTTMLVV 176
ST ++ L ++ P+ SSS+LN +T S++ ++ + ++ L+ + +T L
Sbjct: 3153 STPITSSTTLNTSTPITSSSVLNSSTAITSSSIVNSSTPITSSSVLNSSTPITSSTTLNT 3212
Query: 177 TTPL 188
+TP+
Sbjct: 3213 STPI 3216
Score = 22.2 bits (45), Expect = 9.8
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 STRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV-- 176
ST ++ L ++ P+ SSS+LN S+ S + ++ L P T+ VV
Sbjct: 3321 STAITSSTALNTSTPITSSSVLNSSTAITSSSILNSSTPVTSSSVLNSSTPITSSTVVNS 3380
Query: 177 TTPL 188
+TP+
Sbjct: 3381 STPI 3384
>SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 697
Score = 25.0 bits (52), Expect = 1.4
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 87 RSALAHTDSCFIQNNLSLVRRMPQT 161
+S + HT++ NN SL+RR+ T
Sbjct: 605 KSLIQHTNNLLQSNNASLLRRLAAT 629
>SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 669
Score = 23.4 bits (48), Expect = 4.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 145 LTSDKLFWMKQLSVCASADLVNYSGFKIDEDGTGNVLASSGLAEERVE 2
L D+L + L + SA + G+ D+D NV+A G ++R E
Sbjct: 327 LLYDQLTPITPLMLALSAGTPAFRGYLADQDCRWNVIA--GAVDDRTE 372
>SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1098
Score = 23.0 bits (47), Expect = 5.6
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +2
Query: 86 EVRTGTYRQLFHPEQLITGKEDAANNYARGH 178
EVR F E LI GK+ Y R H
Sbjct: 1010 EVRGSQMIDTFSTELLIPGKQRVQRTYRRTH 1040
>SPAC1687.11 |spb1||rRNA methyltransferase Spb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 22.6 bits (46), Expect = 7.4
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 44 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTI 187
PR VF +++ V T ++FHPE+ +E A++ H T+
Sbjct: 214 PRTVFEEVQEPV-----TNVDAKVFHPEKRKRSREGYADDDYTLHKTV 256
>SPAC2E1P3.02c |amt3||ammonium transporter Amt3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 517
Score = 22.2 bits (45), Expect = 9.8
Identities = 5/7 (71%), Positives = 7/7 (100%)
Frame = +1
Query: 172 WSLHHWK 192
W++HHWK
Sbjct: 421 WAVHHWK 427
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 22.2 bits (45), Expect = 9.8
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 12 SSARPELASTFPVPSSSILNPL 77
S RP L PSSSI +PL
Sbjct: 818 SGGRPALPDEMASPSSSIGHPL 839
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 868,834
Number of Sequences: 5004
Number of extensions: 14257
Number of successful extensions: 108
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 102
length of database: 2,362,478
effective HSP length: 43
effective length of database: 2,147,306
effective search space used: 42946120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -