Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_P19
(192 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 133 2e-32
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 133 2e-32
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 132 3e-32
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 123 2e-29
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 78 1e-15
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 78 1e-15
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 78 1e-15
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 77 2e-15
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 76 5e-15
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 75 1e-14
03_01_0034 + 318432-318825,318902-319851 74 1e-14
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 74 2e-14
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 47 2e-06
01_05_0346 + 21191542-21191783,21191988-21192072,21192159-211924... 28 0.91
04_04_0482 - 25547393-25547455,25547767-25547866,25548154-255482... 26 3.7
03_05_0737 + 27258320-27259007,27259263-27259435,27262684-272627... 26 3.7
03_02_0232 + 6614784-6614882,6616145-6616477,6616708-6616967,661... 26 3.7
11_06_0371 + 22774245-22774413,22774504-22774670,22775538-227756... 25 6.4
02_05_0688 - 30918499-30919602 25 6.4
08_02_1633 + 28392378-28393445 25 8.5
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 133 bits (321), Expect = 2e-32
Identities = 59/63 (93%), Positives = 62/63 (98%)
Frame = +2
Query: 2 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 181
FNTFFSETGAGKHVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 182 TIG 190
TIG
Sbjct: 109 TIG 111
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 133 bits (321), Expect = 2e-32
Identities = 57/63 (90%), Positives = 63/63 (100%)
Frame = +2
Query: 2 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 181
FNTFFSETGAGKHVPRA+FVDLEPTV+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 182 TIG 190
T+G
Sbjct: 109 TVG 111
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 132 bits (320), Expect = 3e-32
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +2
Query: 2 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 181
FNTFFSETGAGKHVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHY 108
Query: 182 TIG 190
TIG
Sbjct: 109 TIG 111
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 123 bits (296), Expect = 2e-29
Identities = 53/63 (84%), Positives = 60/63 (95%)
Frame = +2
Query: 2 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 181
FNTFFSET +GKHVPRA+FVDLEPTV+DEV+TG YRQLFHPEQLI+ KEDAANN+ARGHY
Sbjct: 109 FNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHY 168
Query: 182 TIG 190
T+G
Sbjct: 169 TVG 171
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 77.8 bits (183), Expect = 1e-15
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = +2
Query: 5 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 184
N +++E G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT
Sbjct: 228 NVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYT 287
Query: 185 IG 190
G
Sbjct: 288 EG 289
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 77.8 bits (183), Expect = 1e-15
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = +2
Query: 5 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 184
N +++E G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT
Sbjct: 48 NVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYT 107
Query: 185 IG 190
G
Sbjct: 108 EG 109
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 77.8 bits (183), Expect = 1e-15
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = +2
Query: 5 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 184
N +++E G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT
Sbjct: 48 NVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYT 107
Query: 185 IG 190
G
Sbjct: 108 EG 109
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 77.4 bits (182), Expect = 2e-15
Identities = 30/62 (48%), Positives = 44/62 (70%)
Frame = +2
Query: 5 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 184
N +++E G++VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT
Sbjct: 48 NVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYT 107
Query: 185 IG 190
G
Sbjct: 108 EG 109
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 75.8 bits (178), Expect = 5e-15
Identities = 29/62 (46%), Positives = 44/62 (70%)
Frame = +2
Query: 5 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 184
N +++E G++VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 48 NVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
Query: 185 IG 190
G
Sbjct: 108 EG 109
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 74.5 bits (175), Expect = 1e-14
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = +2
Query: 5 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 184
N +++E G+ VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 48 NVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
Query: 185 IG 190
G
Sbjct: 108 EG 109
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 74.1 bits (174), Expect = 1e-14
Identities = 29/62 (46%), Positives = 42/62 (67%)
Frame = +2
Query: 5 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 184
N +++E G+ VPRAV +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT
Sbjct: 48 NVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYT 107
Query: 185 IG 190
G
Sbjct: 108 EG 109
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 73.7 bits (173), Expect = 2e-14
Identities = 29/62 (46%), Positives = 42/62 (67%)
Frame = +2
Query: 5 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 184
N +F+E G+HVPRAV +DLEP +D +R+G +F P+ + G+ A NN+A+GHYT
Sbjct: 48 NVYFNEASGGRHVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYT 107
Query: 185 IG 190
G
Sbjct: 108 EG 109
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 46.8 bits (106), Expect = 2e-06
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = +2
Query: 5 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGH 178
+ FF + ++PRA+ VDLEP V++ ++ YR L++ E + + A NN+A G+
Sbjct: 49 DVFFYQADDQHYIPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGY 108
Query: 179 Y 181
+
Sbjct: 109 H 109
>01_05_0346 +
21191542-21191783,21191988-21192072,21192159-21192422,
21192518-21192820,21193695-21193799,21193916-21194020,
21194613-21194712,21195614-21195933,21196183-21196359,
21196432-21196560,21196592-21196636,21196851-21197078
Length = 700
Score = 28.3 bits (60), Expect = 0.91
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 27 ELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQ 158
E A++ P+P+S L+P A A +C + N+S R P+
Sbjct: 2 EAAASLPLPASRFLSPPPHPTPAAAAAAACCSRRNISCARAAPR 45
>04_04_0482 -
25547393-25547455,25547767-25547866,25548154-25548203,
25548883-25548969,25549343-25549429,25549510-25550009,
25550061-25550134,25550548-25551632
Length = 681
Score = 26.2 bits (55), Expect = 3.7
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = -3
Query: 106 VCASADLVNYSGFKIDEDGTGNVL 35
+C+++ L++Y ++D G GNV+
Sbjct: 263 ICSTSGLLHYPDTQVDASGKGNVI 286
>03_05_0737 +
27258320-27259007,27259263-27259435,27262684-27262758,
27262832-27263296
Length = 466
Score = 26.2 bits (55), Expect = 3.7
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 12 SSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLV 143
++A E S+ P PSSS P + SA DS +++ L+L+
Sbjct: 88 AAALAEELSSRPAPSSSAAPPPPASSSAAGAADSSVVEDLLALI 131
>03_02_0232 +
6614784-6614882,6616145-6616477,6616708-6616967,
6617328-6617469,6617567-6617938,6618056-6618187,
6618907-6619035,6619125-6621188
Length = 1176
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 5/35 (14%)
Frame = -2
Query: 122 DETTVCMCQCGPRQ-----LQWVQDRRRRHGERAC 33
D+++ C +CG QW R RH R+C
Sbjct: 642 DQSSCCYDECGDENGSIGDFQWQSKERTRHSARSC 676
>11_06_0371 +
22774245-22774413,22774504-22774670,22775538-22775631,
22775723-22775871,22775950-22776042,22776167-22776235,
22776236-22776415,22776465-22776518,22776739-22776905,
22777180-22777314,22777386-22777479,22777567-22777848
Length = 550
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -3
Query: 172 TSIVVCGILLTSDKLFWMKQLSVCASADLVNYSGFKIDEDG 50
T +V C ++ K +++K +V LVN++ ++ + G
Sbjct: 239 TKVVYCHFQVSGSKFYYLKNEAVLLEMALVNWAITEVSKKG 279
>02_05_0688 - 30918499-30919602
Length = 367
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 35 KHVPRAVFVDLEPTVVDEVR 94
K VPRA+++D + VD+VR
Sbjct: 157 KCVPRAIYLDSDVLAVDDVR 176
>08_02_1633 + 28392378-28393445
Length = 355
Score = 25.0 bits (52), Expect = 8.5
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2
Query: 176 DHEHSCLRHPP 144
DH+H C HPP
Sbjct: 256 DHDHDCPNHPP 266
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,129,227
Number of Sequences: 37544
Number of extensions: 108379
Number of successful extensions: 324
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 324
length of database: 14,793,348
effective HSP length: 43
effective length of database: 13,178,956
effective search space used: 263579120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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