Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_P19
(192 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 1.0
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 1.8
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 20 2.3
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 20 2.3
S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor prot... 20 3.1
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 20 3.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 20 3.1
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 20 3.1
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 20 3.1
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 19 5.4
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 19 7.1
DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein. 18 9.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 18 9.4
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 18 9.4
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.4 bits (43), Expect = 1.0
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +2
Query: 20 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 115
E A H+ + D+EPTV RQL
Sbjct: 236 ERRAQSHLEAHCYFDIEPTVQQHQPVTVNRQL 267
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 20.6 bits (41), Expect = 1.8
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 51 ARGTCLPAPVSLKNVL 4
A GTC P L+N++
Sbjct: 6 ATGTCQKKPTKLRNLI 21
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 20.2 bits (40), Expect = 2.3
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = +3
Query: 102 HTDSCFIQNNLSLVRRMPQTTM 167
H D ++ LVR P+T +
Sbjct: 34 HNDPLVVETTSGLVRGFPRTVL 55
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 20.2 bits (40), Expect = 2.3
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = +3
Query: 102 HTDSCFIQNNLSLVRRMPQTTM 167
H D ++ LVR P+T +
Sbjct: 34 HNDPLVVETTSGLVRGFPRTVL 55
>S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor
protein.
Length = 85
Score = 19.8 bits (39), Expect = 3.1
Identities = 7/29 (24%), Positives = 15/29 (51%)
Frame = -3
Query: 181 VVTTSIVVCGILLTSDKLFWMKQLSVCAS 95
+++ ++++ IL S W K + C S
Sbjct: 27 LISYALILFNILHMSSAEGWFKAIGTCGS 55
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 19.8 bits (39), Expect = 3.1
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -2
Query: 98 QCGPRQLQWVQDRRRRHG 45
Q GP + W +D R+ G
Sbjct: 359 QAGPHFITWYKDGRQLPG 376
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 19.8 bits (39), Expect = 3.1
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -2
Query: 98 QCGPRQLQWVQDRRRRHG 45
Q GP + W +D R+ G
Sbjct: 359 QAGPHFITWYKDGRQLPG 376
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +2
Query: 140 GKEDAANNYARGHYTIG 190
GK DAA Y T+G
Sbjct: 264 GKRDAAGIYGSNSSTVG 280
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +2
Query: 140 GKEDAANNYARGHYTIG 190
GK DAA Y T+G
Sbjct: 264 GKRDAAGIYGSNSSTVG 280
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 19.0 bits (37), Expect = 5.4
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -3
Query: 88 LVNYSGFKIDEDG 50
L N+S +DEDG
Sbjct: 94 LYNHSTVPVDEDG 106
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 18.6 bits (36), Expect = 7.1
Identities = 7/24 (29%), Positives = 12/24 (50%)
Frame = +2
Query: 119 HPEQLITGKEDAANNYARGHYTIG 190
HP+Q G ++ + GH +G
Sbjct: 198 HPQQHGLGVQNGYGRHLPGHAQMG 221
>DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein.
Length = 132
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +3
Query: 114 CFIQNNL 134
CFI NNL
Sbjct: 121 CFIDNNL 127
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +3
Query: 96 LAHTDSCFIQNNL 134
L+H ++QNNL
Sbjct: 865 LSHLRELYLQNNL 877
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -3
Query: 55 DGTGNVLASS 26
DG GN+L+ S
Sbjct: 359 DGNGNILSPS 368
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,111
Number of Sequences: 438
Number of extensions: 1286
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 43
effective length of database: 127,509
effective search space used: 2550180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
- SilkBase 1999-2023 -