Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_P18
         (392 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    26   0.57 
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    22   9.2  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 25.8 bits (54), Expect = 0.57
 Identities = 10/37 (27%), Positives = 23/37 (62%)
 Frame = -2

Query: 178  IVTCVGLLSDFFNSLNVTQMSLMTLMFFLKHFNELNQ 68
            +V CV L+S FF+S  ++ + ++ ++  L+    +N+
Sbjct: 931  LVVCVSLISMFFSSGAISVIKILRVLRVLRPLRAINR 967



 Score = 21.8 bits (44), Expect = 9.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 364  IYISISRNSKDQGMISNYQ 308
            +Y+SI  + +D G I N++
Sbjct: 1077 LYVSIDSHEEDSGPIHNFR 1095


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
          coupled receptor protein.
          Length = 695

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 55 LILTFEGRLECE 20
          L++ F GRL+CE
Sbjct: 13 LVVQFSGRLQCE 24


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 329,334
Number of Sequences: 2352
Number of extensions: 6236
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30784536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)