Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_P14
         (244 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q95S87 Cluster: GM05817p; n=6; Endopterygota|Rep: GM058...    99   2e-20
UniRef50_UPI0000518CB0 Cluster: PREDICTED: similar to CG30481-PA...    81   6e-15
UniRef50_A2I437 Cluster: Putative uncharacterized protein; n=1; ...    78   3e-14
UniRef50_UPI000065DB61 Cluster: 39S ribosomal protein L53, mitoc...    48   4e-05
UniRef50_Q7YX52 Cluster: Putative uncharacterized protein; n=2; ...    42   0.003
UniRef50_Q66I54 Cluster: Zgc:103761; n=3; Euteleostomi|Rep: Zgc:...    38   0.032
UniRef50_Q9SKN5 Cluster: Auxin response factor 10; n=11; Magnoli...    36   0.13 
UniRef50_A4RRD0 Cluster: Predicted protein; n=1; Ostreococcus lu...    34   0.70 
UniRef50_Q8I2S2 Cluster: Putative uncharacterized protein PFI115...    33   0.92 
UniRef50_Q5F6E3 Cluster: Putative uncharacterized protein; n=1; ...    32   2.1  
UniRef50_Q76L84 Cluster: Protease; n=9; Bacillus|Rep: Protease -...    32   2.1  
UniRef50_A7SPW6 Cluster: Predicted protein; n=1; Nematostella ve...    31   4.9  
UniRef50_Q5DHG6 Cluster: SJCHGC02465 protein; n=1; Schistosoma j...    31   6.5  

>UniRef50_Q95S87 Cluster: GM05817p; n=6; Endopterygota|Rep: GM05817p
           - Drosophila melanogaster (Fruit fly)
          Length = 155

 Score = 98.7 bits (235), Expect = 2e-20
 Identities = 44/70 (62%), Positives = 54/70 (77%)
 Frame = +2

Query: 35  MSIPFSGTFRRSGGVVSAIGKQLRAVNLKAAKRITVKFDPFGDNVTHTRNFLHYISSQKI 214
           MS+PF G  RRSGG+VSAIGKQL++VNLK  KRITV+FDPF +NV  TR FL  +S+ K+
Sbjct: 1   MSVPFIGALRRSGGIVSAIGKQLKSVNLKGVKRITVQFDPFAENVKSTREFLFLLSTPKV 60

Query: 215 NLTNPNCSLK 244
             TNP C +K
Sbjct: 61  AATNPKCVVK 70


>UniRef50_UPI0000518CB0 Cluster: PREDICTED: similar to CG30481-PA,
           isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG30481-PA, isoform A - Apis mellifera
          Length = 120

 Score = 80.6 bits (190), Expect = 6e-15
 Identities = 37/70 (52%), Positives = 48/70 (68%)
 Frame = +2

Query: 35  MSIPFSGTFRRSGGVVSAIGKQLRAVNLKAAKRITVKFDPFGDNVTHTRNFLHYISSQKI 214
           MSIPF+GT  RS G++SAI K LR ++LK  K I +KFDPF D     R+FL +I++ KI
Sbjct: 1   MSIPFNGTRTRSKGIISAIAKHLRTLSLKPVKSIDIKFDPFHDKALEARDFLFHITTPKI 60

Query: 215 NLTNPNCSLK 244
             TNP C +K
Sbjct: 61  IATNPRCIVK 70


>UniRef50_A2I437 Cluster: Putative uncharacterized protein; n=1;
           Maconellicoccus hirsutus|Rep: Putative uncharacterized
           protein - Maconellicoccus hirsutus (hibiscus mealybug)
          Length = 138

 Score = 78.2 bits (184), Expect = 3e-14
 Identities = 36/70 (51%), Positives = 49/70 (70%)
 Frame = +2

Query: 35  MSIPFSGTFRRSGGVVSAIGKQLRAVNLKAAKRITVKFDPFGDNVTHTRNFLHYISSQKI 214
           M++ ++GT  RSGG+  AI KQL  +NL+ AKRIT +FDPFGDN    R+FL  I+ ++ 
Sbjct: 1   MALKYTGTGTRSGGIYHAIKKQLDLLNLEPAKRITFQFDPFGDNALSMRHFLFIINGKQA 60

Query: 215 NLTNPNCSLK 244
             TNPNC +K
Sbjct: 61  WKTNPNCRIK 70


>UniRef50_UPI000065DB61 Cluster: 39S ribosomal protein L53,
           mitochondrial precursor (L53mt) (MRP-L53).; n=2;
           Euteleostomi|Rep: 39S ribosomal protein L53,
           mitochondrial precursor (L53mt) (MRP-L53). - Takifugu
           rubripes
          Length = 106

 Score = 48.0 bits (109), Expect = 4e-05
 Identities = 23/45 (51%), Positives = 29/45 (64%)
 Frame = +2

Query: 107 AVNLKAAKRITVKFDPFGDNVTHTRNFLHYISSQKINLTNPNCSL 241
           AV LKA K+I V+F PF  NV  TR FL  ++S+K   TN NC +
Sbjct: 8   AVVLKAVKKIVVQFCPFESNVRSTREFLAVVASEKARSTNLNCEV 52


>UniRef50_Q7YX52 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 129

 Score = 41.5 bits (93), Expect = 0.003
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = +2

Query: 104 RAVNLKAAKRITVKFDPFGDNVTHTRNFLHYISSQKINLTNPNCSLK 244
           RA+NL+  K I +  DP   +    R F H I + K+ LTNPN  +K
Sbjct: 25  RALNLQKVKSIDISLDPLHHDNLSIRTFWHSIMAPKVRLTNPNVRVK 71


>UniRef50_Q66I54 Cluster: Zgc:103761; n=3; Euteleostomi|Rep:
           Zgc:103761 - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 108

 Score = 38.3 bits (85), Expect = 0.032
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +2

Query: 110 VNLKAAKRITVKFDPFGDNVTHTRNFLHYISSQKINLTNPNCSL 241
           V LK  K+I V+F PF +N    R FL  + S +   TN NC +
Sbjct: 9   VVLKTVKQIIVQFCPFDNNARSAREFLSIVWSDRARSTNMNCEV 52


>UniRef50_Q9SKN5 Cluster: Auxin response factor 10; n=11;
           Magnoliophyta|Rep: Auxin response factor 10 -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 693

 Score = 36.3 bits (80), Expect = 0.13
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +2

Query: 59  FRRSGGVVSAIGKQLRAVNLKAAKRITVKFDPFGDNVTHT 178
           +R + GV+  IG +  +  +KA KR+T+K D  GDNV  T
Sbjct: 629 YRDANGVIKRIGDEPFSDFMKATKRLTIKMDIGGDNVRKT 668


>UniRef50_A4RRD0 Cluster: Predicted protein; n=1; Ostreococcus
           lucimarinus CCE9901|Rep: Predicted protein -
           Ostreococcus lucimarinus CCE9901
          Length = 113

 Score = 33.9 bits (74), Expect = 0.70
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +2

Query: 116 LKAAKRITVKFDPFGDNVTHTRNFLHYISSQKINLTNPNCSLK 244
           L+  KR+ V+F+P     T  R FL  +++ K   +NP C+++
Sbjct: 3   LRHLKRVRVQFNPLDPRSTAAREFLARVTTAKAAKSNPECAVE 45


>UniRef50_Q8I2S2 Cluster: Putative uncharacterized protein PFI1150w;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PFI1150w - Plasmodium falciparum
            (isolate 3D7)
          Length = 1104

 Score = 33.5 bits (73), Expect = 0.92
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +2

Query: 89   IGKQLRAVNLKAAKRITV-KFDPFGDNVTHTRNFLHYISSQK 211
            + + +  +NLK  K   + KF  F DN+T+T +FL+Y+  +K
Sbjct: 1019 VNENIDLLNLKERKSFRIPKFFHFIDNITNTESFLNYLQKRK 1060


>UniRef50_Q5F6E3 Cluster: Putative uncharacterized protein; n=1;
           Neisseria gonorrhoeae FA 1090|Rep: Putative
           uncharacterized protein - Neisseria gonorrhoeae (strain
           ATCC 700825 / FA 1090)
          Length = 327

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +2

Query: 71  GGVVSAIGKQLRAVNLKA-AKRITVKFDPFGDNVTHTRNFLHYISSQ 208
           GG++SA+GK +   + +A A+R+ + +  F   + H  N L+ +  Q
Sbjct: 196 GGLISAVGKVVNGADSRAEARRLKMPYAEFTGRILHAANLLYDVGIQ 242


>UniRef50_Q76L84 Cluster: Protease; n=9; Bacillus|Rep: Protease -
           Bacillus sp. KSM-9865
          Length = 640

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +2

Query: 35  MSIPFS-GTFRRSGGVVSAIGKQLRAVNLKAAKRITVKFDPFGDNVTHTRNF 187
           M+I F+ G    +GG +SA G    A+ + A + +   F  + DN+ H   F
Sbjct: 360 MTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSFGSYADNINHVAQF 411


>UniRef50_A7SPW6 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 291

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = +2

Query: 143 KFDPFGDNVTHTRNFL--HYISSQKINLTNPNCSL 241
           K + FGD VTH R F+  H +S+ ++   NP+  L
Sbjct: 117 KLNMFGDQVTHLREFILTHELSNLRVEHNNPDSML 151


>UniRef50_Q5DHG6 Cluster: SJCHGC02465 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC02465 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 127

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +2

Query: 95  KQLRAVNLKAAKRITVKFDPFGDNVTHTRNFLHYISSQKINLTNPNCSLK 244
           K ++ +N K  KRI  +F+P  +     R F   +S  K   +N N  +K
Sbjct: 30  KIIKQLNFKPIKRIACRFNPLLEKTESIRRFCLILSEPKWRTSNANLLVK 79


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,687,203
Number of Sequences: 1657284
Number of extensions: 2821399
Number of successful extensions: 7089
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7089
length of database: 575,637,011
effective HSP length: 59
effective length of database: 477,857,255
effective search space used: 10035002355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)