Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_P14
         (244 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   0.83 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   1.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   1.9  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    20   3.3  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    19   5.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    19   5.8  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 0.83
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -1

Query: 169 NVISKRIKFHGNSFRCF*IYCS*LFTYCRNNTS*SSKCTTKRYRHT 32
           ++++  +K H N +R     CS    YC      S K   +RY HT
Sbjct: 272 SMLNSHMKSHSNVYRYSCRDCSYATKYCH-----SLKIHLRRYGHT 312


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 1.9
 Identities = 15/43 (34%), Positives = 17/43 (39%)
 Frame = +2

Query: 116 LKAAKRITVKFDPFGDNVTHTRNFLHYISSQKINLTNPNCSLK 244
           LK    ITV F   G  V      L   S  K N+T   C+ K
Sbjct: 60  LKVVTIITVFFVVLGAAVVSKGTTLFMTSQIKKNVTRAYCNKK 102


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 1.9
 Identities = 15/43 (34%), Positives = 17/43 (39%)
 Frame = +2

Query: 116 LKAAKRITVKFDPFGDNVTHTRNFLHYISSQKINLTNPNCSLK 244
           LK    ITV F   G  V      L   S  K N+T   C+ K
Sbjct: 60  LKVVTIITVFFVVLGAAVVSKGTTLFMTSQIKKNVTRAYCNKK 102


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 20.2 bits (40), Expect = 3.3
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -1

Query: 169 NVISKRIKFHGNSFRCF*IYCS*LFTYCRNNTS*SSKCTTKRYRH 35
           ++++  +K H N +R     CS    YC      S K   +RY H
Sbjct: 30  SMLNSHMKSHSNVYRYSCRDCSYATKYCH-----SLKIHLRRYGH 69


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 19.4 bits (38), Expect = 5.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 68  SGGVVSAIGKQLRAVNLKAA 127
           S G  + IGK+   + LKAA
Sbjct: 445 SAGPRNCIGKKFAMLELKAA 464


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 19.4 bits (38), Expect = 5.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 68  SGGVVSAIGKQLRAVNLKAA 127
           S G  + IGK+   + LKAA
Sbjct: 445 SAGPRNCIGKKFAMLELKAA 464


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,813
Number of Sequences: 336
Number of extensions: 808
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used:  3642386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)