Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_P14
         (244 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1797|AAM68563.1|  155|Drosophila melanogaster CG30481-P...   101   2e-22
AY060913-1|AAL28461.1|  155|Drosophila melanogaster GM05817p pro...    99   9e-22
U91980-1|AAC47506.1| 2346|Drosophila melanogaster Tpr homolog pr...    26   8.0  
BT001737-1|AAN71492.1|  442|Drosophila melanogaster RE72573p pro...    26   8.0  
AE013599-1350|AAF58615.1| 2346|Drosophila melanogaster CG8274-PA...    26   8.0  

>AE013599-1797|AAM68563.1|  155|Drosophila melanogaster CG30481-PA,
           isoform A protein.
          Length = 155

 Score =  101 bits (241), Expect = 2e-22
 Identities = 45/70 (64%), Positives = 55/70 (78%)
 Frame = +2

Query: 35  MSIPFSGTFRRSGGVVSAIGKQLRAVNLKAAKRITVKFDPFGDNVTHTRNFLHYISSQKI 214
           MS+PFSG  RRSGG+VSAIGKQL++VNLK  KRITV+FDPF +NV  TR FL  +S+ K+
Sbjct: 1   MSVPFSGALRRSGGIVSAIGKQLKSVNLKGVKRITVQFDPFAENVKSTREFLFLLSTPKV 60

Query: 215 NLTNPNCSLK 244
             TNP C +K
Sbjct: 61  AATNPKCVVK 70


>AY060913-1|AAL28461.1|  155|Drosophila melanogaster GM05817p
           protein.
          Length = 155

 Score = 98.7 bits (235), Expect = 9e-22
 Identities = 44/70 (62%), Positives = 54/70 (77%)
 Frame = +2

Query: 35  MSIPFSGTFRRSGGVVSAIGKQLRAVNLKAAKRITVKFDPFGDNVTHTRNFLHYISSQKI 214
           MS+PF G  RRSGG+VSAIGKQL++VNLK  KRITV+FDPF +NV  TR FL  +S+ K+
Sbjct: 1   MSVPFIGALRRSGGIVSAIGKQLKSVNLKGVKRITVQFDPFAENVKSTREFLFLLSTPKV 60

Query: 215 NLTNPNCSLK 244
             TNP C +K
Sbjct: 61  AATNPKCVVK 70


>U91980-1|AAC47506.1| 2346|Drosophila melanogaster Tpr homolog
           protein.
          Length = 2346

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 140 VKFDPFGDNVTHTRNFLHYISSQKINL 220
           VKF  F  NV   R  L  +SS+++NL
Sbjct: 69  VKFTSFELNVNELRTHLDQMSSERVNL 95


>BT001737-1|AAN71492.1|  442|Drosophila melanogaster RE72573p
           protein.
          Length = 442

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 140 VKFDPFGDNVTHTRNFLHYISSQKINL 220
           VKF  F  NV   R  L  +SS+++NL
Sbjct: 69  VKFTSFELNVNELRTHLDQMSSERVNL 95


>AE013599-1350|AAF58615.1| 2346|Drosophila melanogaster CG8274-PA
           protein.
          Length = 2346

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 140 VKFDPFGDNVTHTRNFLHYISSQKINL 220
           VKF  F  NV   R  L  +SS+++NL
Sbjct: 69  VKFTSFELNVNELRTHLDQMSSERVNL 95


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,773,793
Number of Sequences: 53049
Number of extensions: 129601
Number of successful extensions: 534
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 24,988,368
effective HSP length: 60
effective length of database: 21,805,428
effective search space used: 436108560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)