Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_P10
         (168 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q29JR1 Cluster: GA21893-PA; n=2; Diptera|Rep: GA21893-P...    67   6e-11
UniRef50_Q8SYU0 Cluster: RE34039p; n=5; Endopterygota|Rep: RE340...    66   1e-10
UniRef50_UPI000065D3AC Cluster: Coiled-coil domain-containing pr...    58   5e-08
UniRef50_UPI0000E4746C Cluster: PREDICTED: hypothetical protein;...    50   1e-05
UniRef50_Q96MW1 Cluster: Coiled-coil domain-containing protein 4...    47   1e-04
UniRef50_Q6CT09 Cluster: Probable nucleolar complex protein 14; ...    31   5.1  

>UniRef50_Q29JR1 Cluster: GA21893-PA; n=2; Diptera|Rep: GA21893-PA -
           Drosophila pseudoobscura (Fruit fly)
          Length = 229

 Score = 67.3 bits (157), Expect = 6e-11
 Identities = 30/47 (63%), Positives = 38/47 (80%)
 Frame = +2

Query: 20  EFEPWLIEKLRSLKTDEGVFGSYISGILDSEDNADDKKDALEGILSE 160
           EF+ WL E+LR L TDEGVFGSYI GIL+ E++ ++K + LEGILSE
Sbjct: 6   EFQGWLNEQLRQLNTDEGVFGSYIVGILEGEESDEEKAEGLEGILSE 52


>UniRef50_Q8SYU0 Cluster: RE34039p; n=5; Endopterygota|Rep: RE34039p
           - Drosophila melanogaster (Fruit fly)
          Length = 208

 Score = 66.5 bits (155), Expect = 1e-10
 Identities = 29/47 (61%), Positives = 37/47 (78%)
 Frame = +2

Query: 20  EFEPWLIEKLRSLKTDEGVFGSYISGILDSEDNADDKKDALEGILSE 160
           +F+ WL E+LR L TDE VFGSYI GIL+ ++  D+K +ALEGILSE
Sbjct: 6   DFQSWLNEQLRKLNTDENVFGSYIIGILEGDETTDEKTEALEGILSE 52


>UniRef50_UPI000065D3AC Cluster: Coiled-coil domain-containing
           protein 43.; n=1; Takifugu rubripes|Rep: Coiled-coil
           domain-containing protein 43. - Takifugu rubripes
          Length = 210

 Score = 57.6 bits (133), Expect = 5e-08
 Identities = 25/49 (51%), Positives = 35/49 (71%)
 Frame = +2

Query: 20  EFEPWLIEKLRSLKTDEGVFGSYISGILDSEDNADDKKDALEGILSEIV 166
           EFE WL ++L SL+ D  V+G+YI G+L  E+  ++K+DAL GILS  V
Sbjct: 6   EFESWLNDRLDSLEVDRDVYGTYILGVLQEEETDEEKEDALNGILSAFV 54


>UniRef50_UPI0000E4746C Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 226

 Score = 50.0 bits (114), Expect = 1e-05
 Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +2

Query: 5   SARGSEFEPWLIEKLRSLKTDEGVFGSYISGILDSED-NADDKKDALEGILSEIV 166
           +A    F  WL  KL  L  D+ VFGSYIS I++++D N ++K +AL GIL  I+
Sbjct: 4   AAACQSFGDWLSLKLEQLNIDQDVFGSYISSIVETDDSNEEEKSEALNGILGGIL 58


>UniRef50_Q96MW1 Cluster: Coiled-coil domain-containing protein 43;
           n=31; Euteleostomi|Rep: Coiled-coil domain-containing
           protein 43 - Homo sapiens (Human)
          Length = 224

 Score = 46.8 bits (106), Expect = 1e-04
 Identities = 23/48 (47%), Positives = 31/48 (64%)
 Frame = +2

Query: 14  GSEFEPWLIEKLRSLKTDEGVFGSYISGILDSEDNADDKKDALEGILS 157
           G  F  WL  +L +L  D  V+G+YI GIL  E+  ++K DAL+GILS
Sbjct: 19  GGGFGSWLDGRLEALGVDRAVYGAYILGILQEEEE-EEKLDALQGILS 65


>UniRef50_Q6CT09 Cluster: Probable nucleolar complex protein 14;
           n=1; Kluyveromyces lactis|Rep: Probable nucleolar
           complex protein 14 - Kluyveromyces lactis (Yeast)
           (Candida sphaerica)
          Length = 837

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 62  TDEGVFGSYISGILDSEDNADDKKD 136
           ++EG +G YI  I DS+D+ D +KD
Sbjct: 363 SEEGEYGEYIKAIPDSDDDVDFEKD 387


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,543,319
Number of Sequences: 1657284
Number of extensions: 1482845
Number of successful extensions: 5066
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5063
length of database: 575,637,011
effective HSP length: 35
effective length of database: 517,632,071
effective search space used: 10352641420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)