Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_P10
         (168 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   2.0  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    20   2.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    20   2.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    20   2.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = -1

Query: 63   VFNDLNFSINHG-SNSLPR 10
            VF + NFSIN+  S  +PR
Sbjct: 1615 VFYNANFSINYWISEGVPR 1633


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 9/21 (42%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = -1

Query: 75  TPSSVFNDLNFSIN-HGSNSL 16
           TPS+  N+ NF+ N +G++S+
Sbjct: 131 TPSATNNNTNFNNNSNGASSV 151


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 9/21 (42%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = -1

Query: 75  TPSSVFNDLNFSIN-HGSNSL 16
           TPS+  N+ NF+ N +G++S+
Sbjct: 79  TPSATNNNTNFNNNSNGASSV 99


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 9/21 (42%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = -1

Query: 75  TPSSVFNDLNFSIN-HGSNSL 16
           TPS+  N+ NF+ N +G++S+
Sbjct: 262 TPSATNNNTNFNNNSNGASSV 282


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,639
Number of Sequences: 336
Number of extensions: 378
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 35
effective length of database: 110,825
effective search space used:  2216500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)