Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_P10
(168 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 20 2.4
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 19 4.2
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 19 5.6
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 19 5.6
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 19 5.6
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 19 5.6
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 19 5.6
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 19 7.3
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 19 7.3
DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein. 18 9.7
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 18 9.7
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 18 9.7
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 20.2 bits (40), Expect = 2.4
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 99 IPEM*LPKTPSSVFNDLNFSINHG 28
+P++ L + P + NDL HG
Sbjct: 344 LPKLLLMRVPDDLLNDLAAHKMHG 367
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 19.4 bits (38), Expect = 4.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 83 SYISGILDSEDNA 121
S ++ +LD EDNA
Sbjct: 385 SLLANVLDLEDNA 397
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 19.0 bits (37), Expect = 5.6
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = +2
Query: 32 WLIEKLRSLKTDEGVFGSYISGILDSEDNA 121
W + L DEG G+Y + ++ + D +
Sbjct: 69 WKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 19.0 bits (37), Expect = 5.6
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = +2
Query: 32 WLIEKLRSLKTDEGVFGSYISGILDSEDNA 121
W + L DEG G+Y + ++ + D +
Sbjct: 69 WKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 19.0 bits (37), Expect = 5.6
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = +2
Query: 32 WLIEKLRSLKTDEGVFGSYISGILDSEDNA 121
W + L DEG G+Y + ++ + D +
Sbjct: 69 WKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 19.0 bits (37), Expect = 5.6
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = +2
Query: 32 WLIEKLRSLKTDEGVFGSYISGILDSEDNA 121
W + L DEG G+Y + ++ + D +
Sbjct: 69 WKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 19.0 bits (37), Expect = 5.6
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = +2
Query: 32 WLIEKLRSLKTDEGVFGSYISGILDSEDNA 121
W + L DEG G+Y + ++ + D +
Sbjct: 69 WKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 18.6 bits (36), Expect = 7.3
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3
Query: 91 NVATKNSLICF 59
N T+NSL CF
Sbjct: 555 NKITRNSLDCF 565
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 18.6 bits (36), Expect = 7.3
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3
Query: 91 NVATKNSLICF 59
N T+NSL CF
Sbjct: 555 NKITRNSLDCF 565
>DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein.
Length = 135
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/25 (24%), Positives = 14/25 (56%)
Frame = +2
Query: 59 KTDEGVFGSYISGILDSEDNADDKK 133
KT+ G+ + +++ + +DKK
Sbjct: 34 KTETGIDQQKANDVIEGNIDVEDKK 58
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 125 DKKDALEGILSEIV 166
+ +DA+ I+SEI+
Sbjct: 273 ESEDAIYNIISEII 286
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 18.2 bits (35), Expect = 9.7
Identities = 5/9 (55%), Positives = 9/9 (100%)
Frame = -1
Query: 57 NDLNFSINH 31
N+LNF++N+
Sbjct: 54 NELNFNLNY 62
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,072
Number of Sequences: 438
Number of extensions: 488
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 35
effective length of database: 131,013
effective search space used: 2620260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
- SilkBase 1999-2023 -