Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_P08
(206 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 55 4e-08
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 54 1e-07
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 53 1e-07
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 53 1e-07
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 53 1e-07
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 53 1e-07
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 53 1e-07
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 53 1e-07
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 53 1e-07
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 53 1e-07
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 53 1e-07
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 53 1e-07
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 53 1e-07
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 53 1e-07
Y12059-1|CAA72780.1| 722|Homo sapiens HUNKI protein. 29 2.7
BC091649-1|AAH91649.1| 550|Homo sapiens BRD4 protein protein. 29 2.7
BC067129-1|AAH67129.1| 548|Homo sapiens BRD4 protein protein. 29 2.7
BC047888-1|AAH47888.1| 548|Homo sapiens BRD4 protein protein. 29 2.7
BC038988-1|AAH38988.1| 549|Homo sapiens BRD4 protein protein. 29 2.7
BC035266-1|AAH35266.1| 794|Homo sapiens BRD4 protein protein. 29 2.7
BC030158-1|AAH30158.1| 548|Homo sapiens BRD4 protein protein. 29 2.7
BC000156-1|AAH00156.1| 549|Homo sapiens Unknown (protein for IM... 29 2.7
AY166680-1|AAO22237.1| 1846|Homo sapiens BRD4-NUT fusion oncopro... 29 2.7
AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing ... 29 2.7
AC004798-1|AAC27978.1| 731|Homo sapiens R31546_1 protein. 29 2.7
Z99916-3|CAI17930.1| 1806|Homo sapiens protein ( Human DNA seque... 28 4.8
AL022323-1|CAI17936.1| 1806|Homo sapiens protein ( Human DNA seq... 28 4.8
X76302-1|CAA53949.1| 163|Homo sapiens nucleic acid binding prot... 28 6.3
BC017890-1|AAH17890.1| 155|Homo sapiens putative nucleic acid b... 28 6.3
AC019206-3|AAY14866.1| 155|Homo sapiens unknown protein. 28 6.3
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +1
Query: 85 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVN 201
++VARPL+SVYSEK E +G ++ LP VFKAPIRPD+VN
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVN 38
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1
Query: 82 SLSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVN 201
+++ ARPL+SVYSEK E +G ++ LP VFKAPIRPD+VN
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 52
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 85 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVN 201
++ ARPL+SVYSEK E +G ++ LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 85 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVN 201
++ ARPL+SVYSEK E +G ++ LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 85 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVN 201
++ ARPL+SVYSEK E +G ++ LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 85 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVN 201
++ ARPL+SVYSEK E +G ++ LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 85 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVN 201
++ ARPL+SVYSEK E +G ++ LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 85 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVN 201
++ ARPL+SVYSEK E +G ++ LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 85 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVN 201
++ ARPL+SVYSEK E +G ++ LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 85 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVN 201
++ ARPL+SVYSEK E +G ++ LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 85 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVN 201
++ ARPL+SVYSEK E +G ++ LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 85 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVN 201
++ ARPL+SVYSEK E +G ++ LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 85 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVN 201
++ ARPL+SVYSEK E +G ++ LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 85 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVN 201
++ ARPL+SVYSEK E +G ++ LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
>Y12059-1|CAA72780.1| 722|Homo sapiens HUNKI protein.
Length = 722
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 145 PLRRPHSSPNTP-TLKVGLLTDSFRFISEVIPPKNTIDGGKDHPPP 11
P+ P S P P T K+G +S R V PPK + + HP P
Sbjct: 302 PIHEPPSLPPEPKTTKLGQRRESSR---PVKPPKKDVPDSQQHPAP 344
>BC091649-1|AAH91649.1| 550|Homo sapiens BRD4 protein protein.
Length = 550
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 145 PLRRPHSSPNTP-TLKVGLLTDSFRFISEVIPPKNTIDGGKDHPPP 11
P+ P S P P T K+G +S R V PPK + + HP P
Sbjct: 302 PIHEPPSLPPEPKTTKLGQRRESSR---PVKPPKKDVPDSQQHPAP 344
>BC067129-1|AAH67129.1| 548|Homo sapiens BRD4 protein protein.
Length = 548
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 145 PLRRPHSSPNTP-TLKVGLLTDSFRFISEVIPPKNTIDGGKDHPPP 11
P+ P S P P T K+G +S R V PPK + + HP P
Sbjct: 302 PIHEPPSLPPEPKTTKLGQRRESSR---PVKPPKKDVPDSQQHPAP 344
>BC047888-1|AAH47888.1| 548|Homo sapiens BRD4 protein protein.
Length = 548
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 145 PLRRPHSSPNTP-TLKVGLLTDSFRFISEVIPPKNTIDGGKDHPPP 11
P+ P S P P T K+G +S R V PPK + + HP P
Sbjct: 302 PIHEPPSLPPEPKTTKLGQRRESSR---PVKPPKKDVPDSQQHPAP 344
>BC038988-1|AAH38988.1| 549|Homo sapiens BRD4 protein protein.
Length = 549
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 145 PLRRPHSSPNTP-TLKVGLLTDSFRFISEVIPPKNTIDGGKDHPPP 11
P+ P S P P T K+G +S R V PPK + + HP P
Sbjct: 302 PIHEPPSLPPEPKTTKLGQRRESSR---PVKPPKKDVPDSQQHPAP 344
>BC035266-1|AAH35266.1| 794|Homo sapiens BRD4 protein protein.
Length = 794
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 145 PLRRPHSSPNTP-TLKVGLLTDSFRFISEVIPPKNTIDGGKDHPPP 11
P+ P S P P T K+G +S R V PPK + + HP P
Sbjct: 302 PIHEPPSLPPEPKTTKLGQRRESSR---PVKPPKKDVPDSQQHPAP 344
>BC030158-1|AAH30158.1| 548|Homo sapiens BRD4 protein protein.
Length = 548
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 145 PLRRPHSSPNTP-TLKVGLLTDSFRFISEVIPPKNTIDGGKDHPPP 11
P+ P S P P T K+G +S R V PPK + + HP P
Sbjct: 302 PIHEPPSLPPEPKTTKLGQRRESSR---PVKPPKKDVPDSQQHPAP 344
>BC000156-1|AAH00156.1| 549|Homo sapiens Unknown (protein for
IMAGE:2900081) protein.
Length = 549
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 145 PLRRPHSSPNTP-TLKVGLLTDSFRFISEVIPPKNTIDGGKDHPPP 11
P+ P S P P T K+G +S R V PPK + + HP P
Sbjct: 302 PIHEPPSLPPEPKTTKLGQRRESSR---PVKPPKKDVPDSQQHPAP 344
>AY166680-1|AAO22237.1| 1846|Homo sapiens BRD4-NUT fusion
oncoprotein protein.
Length = 1846
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 145 PLRRPHSSPNTP-TLKVGLLTDSFRFISEVIPPKNTIDGGKDHPPP 11
P+ P S P P T K+G +S R V PPK + + HP P
Sbjct: 302 PIHEPPSLPPEPKTTKLGQRRESSR---PVKPPKKDVPDSQQHPAP 344
>AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing 4
protein.
Length = 1362
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 145 PLRRPHSSPNTP-TLKVGLLTDSFRFISEVIPPKNTIDGGKDHPPP 11
P+ P S P P T K+G +S R V PPK + + HP P
Sbjct: 302 PIHEPPSLPPEPKTTKLGQRRESSR---PVKPPKKDVPDSQQHPAP 344
>AC004798-1|AAC27978.1| 731|Homo sapiens R31546_1 protein.
Length = 731
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 145 PLRRPHSSPNTP-TLKVGLLTDSFRFISEVIPPKNTIDGGKDHPPP 11
P+ P S P P T K+G +S R V PPK + + HP P
Sbjct: 313 PIHEPPSLPPEPKTTKLGQRRESSR---PVKPPKKDVPDSQQHPAP 355
>Z99916-3|CAI17930.1| 1806|Homo sapiens protein ( Human DNA sequence
from clone CTA-221G9 on chromosome 22q11.21-12.2.riant
1. ).
Length = 1806
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -2
Query: 127 SSPNTPTLK-VGLLTDSFRFISEVIPPKNTIDGGKDHPPPRA 5
+ P PT K G L S + PP + G+DHPP +A
Sbjct: 180 AKPALPTQKPAGTLPRSAPLSQDTKPPVPQEEAGQDHPPSKA 221
>AL022323-1|CAI17936.1| 1806|Homo sapiens protein ( Human DNA
sequence from clone CTA-243E7 on chromosome 22q12.1. ).
Length = 1806
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -2
Query: 127 SSPNTPTLK-VGLLTDSFRFISEVIPPKNTIDGGKDHPPPRA 5
+ P PT K G L S + PP + G+DHPP +A
Sbjct: 180 AKPALPTQKPAGTLPRSAPLSQDTKPPVPQEEAGQDHPPSKA 221
>X76302-1|CAA53949.1| 163|Homo sapiens nucleic acid binding protein
protein.
Length = 163
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -1
Query: 125 FSEYTDTKGRATDRLISLYQRSYSSKKHYRRW 30
F+ + TKG+ D ++ Y + S K+ YR++
Sbjct: 117 FASFDSTKGKKVDGSVNAYAINVSQKRKYRQY 148
>BC017890-1|AAH17890.1| 155|Homo sapiens putative nucleic acid
binding protein RY-1 protein.
Length = 155
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -1
Query: 125 FSEYTDTKGRATDRLISLYQRSYSSKKHYRRW 30
F+ + TKG+ D ++ Y + S K+ YR++
Sbjct: 109 FASFDSTKGKKVDGSVNAYAINVSQKRKYRQY 140
>AC019206-3|AAY14866.1| 155|Homo sapiens unknown protein.
Length = 155
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -1
Query: 125 FSEYTDTKGRATDRLISLYQRSYSSKKHYRRW 30
F+ + TKG+ D ++ Y + S K+ YR++
Sbjct: 109 FASFDSTKGKKVDGSVNAYAINVSQKRKYRQY 140
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,195,723
Number of Sequences: 237096
Number of extensions: 514309
Number of successful extensions: 1432
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1418
length of database: 76,859,062
effective HSP length: 47
effective length of database: 65,715,550
effective search space used: 1380026550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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