Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_P06
         (249 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    27   0.030
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    24   0.28 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    24   0.28 
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    24   0.28 
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    24   0.28 
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    21   2.6  

>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 27.1 bits (57), Expect = 0.030
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 130 PRPRLATGWLALLMGSTIPEPSA 62
           PR RL T WLA  + S   +PSA
Sbjct: 2   PRARLVTLWLAFNLASIAQDPSA 24


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 23.8 bits (49), Expect = 0.28
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 72  SGIVDPINKANQPVA 116
           S +VDP+N  +QP A
Sbjct: 107 SAVVDPLNSCSQPAA 121


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.8 bits (49), Expect = 0.28
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 72  SGIVDPINKANQPVA 116
           S +VDP+N  +QP A
Sbjct: 166 SAVVDPLNSCSQPAA 180


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 23.8 bits (49), Expect = 0.28
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 72  SGIVDPINKANQPVA 116
           S +VDP+N  +QP A
Sbjct: 107 SAVVDPLNSCSQPAA 121


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 23.8 bits (49), Expect = 0.28
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 72  SGIVDPINKANQPVA 116
           S +VDP+N  +QP A
Sbjct: 166 SAVVDPLNSCSQPAA 180


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 98  FINGIHNTGTFGT*PLTFSPTKFL 27
           FI G+H+   +   P  F P ++L
Sbjct: 88  FIYGMHHNEKYFPEPEKFDPNRYL 111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,562
Number of Sequences: 336
Number of extensions: 775
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  3737755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)