Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_P06
(249 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0221 + 5962606-5963197,5963711-5963837,5963994-5964100,596... 75 1e-14
04_01_0082 + 897026-897028,897101-897350,898454-898608,898686-89... 46 6e-06
02_01_0500 - 3623837-3624019,3624591-3624778,3625209-3626147,362... 44 2e-05
08_02_0036 - 11455762-11455802,11455996-11456104,11456207-114568... 42 5e-05
02_05_1041 - 33713561-33714564,33714844-33714904,33715640-337159... 40 3e-04
01_01_0489 + 3608720-3608811,3609326-3609431,3609518-3609581,360... 36 0.003
01_05_0166 + 18844468-18845184,18847394-18847690 35 0.008
12_02_1111 - 26157796-26160330 35 0.010
03_01_0177 + 1424773-1424850,1425307-1425391,1425498-1425577,142... 35 0.010
04_04_0489 + 25600543-25601368,25601441-25602282 34 0.014
04_04_0422 + 25098612-25099025,25099500-25099633,25099817-251000... 34 0.014
01_05_0604 - 23583244-23584989 31 0.13
08_02_0732 + 20521459-20522323,20522404-20522480,20523251-205232... 30 0.30
09_04_0529 + 18356964-18358307,18359829-18359944,18360036-183601... 28 0.91
04_03_0771 + 19434460-19434987 27 1.6
03_02_0392 - 8070342-8071628 27 2.1
07_01_0383 - 2856777-2858042,2858238-2858270,2858607-2858742,286... 27 2.8
02_01_0279 - 1860410-1860508,1861536-1861889,1862660-1862805,186... 27 2.8
01_01_0499 - 3675303-3675484,3676888-3676982,3677046-3677096,367... 27 2.8
01_01_0960 + 7546081-7546161,7546439-7546537,7546650-7546706,754... 26 4.8
12_01_0907 + 8818357-8819033,8819077-8821352,8821465-8821730 25 6.4
11_03_0072 + 9605273-9606814,9616982-9617016,9617271-9617348,961... 25 6.4
02_04_0621 - 24502383-24502476,24502532-24504015,24504125-245041... 25 6.4
12_01_0113 - 864380-865027,865419-866408,867128-867194,868377-86... 25 8.5
07_03_0522 - 19021915-19022649,19022725-19023012,19023091-190235... 25 8.5
05_06_0079 + 25415534-25415582,25415679-25415749,25415852-254159... 25 8.5
01_05_0024 - 17262504-17263308,17264251-17264399,17264879-172649... 25 8.5
>09_02_0221 +
5962606-5963197,5963711-5963837,5963994-5964100,
5964185-5964328,5964700-5964822,5964921-5965103,
5965540-5965718,5965797-5965823
Length = 493
Score = 74.5 bits (175), Expect = 1e-14
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +3
Query: 9 VGFKMLQKLGWTEGQGLGAEGSGIVDPINKANQPVANLGLGASTSDVVSPEDDEFDAYRK 188
+G K+L K+GW EG+GLG+E SG DPI + +LG+GA V+ EDD ++ Y+K
Sbjct: 413 IGHKLLSKMGWREGEGLGSERSGRADPIMAGDVKKDHLGVGAVQPGEVTSEDDIYEQYKK 472
Query: 189 RMMLAYRF 212
RMML YR+
Sbjct: 473 RMMLGYRY 480
>04_01_0082 +
897026-897028,897101-897350,898454-898608,898686-898967,
899078-899160,899335-899485,899896-899952,900279-900479
Length = 393
Score = 45.6 bits (103), Expect = 6e-06
Identities = 24/55 (43%), Positives = 33/55 (60%)
Frame = +3
Query: 3 TRVGFKMLQKLGWTEGQGLGAEGSGIVDPINKANQPVANLGLGASTSDVVSPEDD 167
+ VGF++LQK+GW +G+GLG GI +PI KA A LG+G D +D
Sbjct: 62 SNVGFRLLQKMGW-KGKGLGKNEQGITEPI-KAGIRDAKLGVGKQEQDDFFTSED 114
>02_01_0500 - 3623837-3624019,3624591-3624778,3625209-3626147,
3626311-3626479,3626701-3626871,3626948-3627016,
3627094-3627201,3627844-3627997,3628659-3628738,
3628822-3628914,3628951-3629073,3629165-3629915,
3630123-3630163,3630338-3630385
Length = 1038
Score = 43.6 bits (98), Expect = 2e-05
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 3 TRVGFKMLQKLGWTEGQGLGAEGSGIVDPINKANQPV-ANLGLGASTSDVVSPEDDEFDA 179
+ VG ++L+ +GW EG GLG GSGI +P+ + V A LG S S E D+
Sbjct: 962 SNVGNRILRNMGWQEGLGLGKTGSGIKEPVQAKSVDVRAGLGSQQRKSSDPSLEAQAGDS 1021
Query: 180 YR 185
Y+
Sbjct: 1022 YK 1023
>08_02_0036 -
11455762-11455802,11455996-11456104,11456207-11456854,
11457422-11457491,11458563-11458624,11458729-11458803,
11459423-11459514,11460233-11461466
Length = 776
Score = 42.3 bits (95), Expect = 5e-05
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +3
Query: 12 GFKMLQKLGWTEGQGLGAEGSGIVDPINKANQPVANLGLG 131
G KM+ K+G+ EG GLG +G G++ PI +P +LGLG
Sbjct: 614 GSKMMAKMGFIEGTGLGKDGQGMMQPIQPIQRP-KSLGLG 652
Score = 37.9 bits (84), Expect = 0.001
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +3
Query: 12 GFKMLQKLGWTEGQGLGAEGSGIVDPI 92
G KM+ ++G+ EG GLG +G GIV+P+
Sbjct: 699 GSKMMARMGFVEGSGLGKDGQGIVNPL 725
>02_05_1041 -
33713561-33714564,33714844-33714904,33715640-33715951,
33716780-33716917
Length = 504
Score = 39.9 bits (89), Expect = 3e-04
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 9 VGFKMLQKLGWTEGQGLGAEGSGIVDPIN-KANQPVANLGLGASTSDV 149
V KM+ K+G+ EG GLG G G++DPI K P +L + S+V
Sbjct: 307 VASKMMAKMGYREGMGLGVSGQGMLDPIPVKVLPPKQSLDHAVAASEV 354
>01_01_0489 +
3608720-3608811,3609326-3609431,3609518-3609581,
3609905-3609965,3610017-3610144,3610236-3610385,
3610537-3610791,3611060-3611265,3611469-3611696,
3612161-3612259
Length = 462
Score = 36.3 bits (80), Expect = 0.003
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 18 KMLQKLGWTEGQGLGAEGSGIVDPIN-KANQPVANLG 125
KM++ +GW EG+ LG G+V+PI N+ A LG
Sbjct: 421 KMMENMGWKEGEALGKSTKGMVEPIQPTVNKHGAGLG 457
>01_05_0166 + 18844468-18845184,18847394-18847690
Length = 337
Score = 35.1 bits (77), Expect = 0.008
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 18 KMLQKLGWTEGQGLGAEGSGIVDPI--NKANQPVANLGLGASTSDVVSPEDDEFDAYRKR 191
+M+ ++GW EGQGLG + GI P+ K ++ + S+ P+ FD R
Sbjct: 173 RMMARMGWKEGQGLGKQEQGITAPLVAKKTDRRGGVIVDENSSKQEKKPKSVNFDGPPTR 232
Query: 192 MML 200
++L
Sbjct: 233 VLL 235
>12_02_1111 - 26157796-26160330
Length = 844
Score = 34.7 bits (76), Expect = 0.010
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 18 KMLQKLGWTEGQGLGAEGSGIVDPINKANQPVANLGLGA 134
KM+ +G+ +G GLG GIV P+ +P N GLG+
Sbjct: 188 KMMAMMGYKDGMGLGKNEQGIVAPVETTLRP-KNAGLGS 225
>03_01_0177 +
1424773-1424850,1425307-1425391,1425498-1425577,
1425771-1425898,1425962-1426049,1426187-1426277,
1426712-1426881,1427151-1427438,1427527-1427643,
1427924-1427976,1428029-1428090,1429042-1429118,
1429269-1429322,1429417-1429476,1429581-1429658,
1429805-1429851,1429933-1430051,1430280-1430364,
1430443-1430557,1430662-1430784,1430869-1430969,
1431346-1431475
Length = 742
Score = 34.7 bits (76), Expect = 0.010
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +3
Query: 15 FKMLQKLGWTEGQGLGAEGSGIVDPINKANQPVANLGLGAST 140
F++++++GW EG+GLG + GI + N+ LG+G +
Sbjct: 20 FRLMKQMGWEEGEGLGKDKQGIKGHVRVKNKQ-DTLGVGVDS 60
>04_04_0489 + 25600543-25601368,25601441-25602282
Length = 555
Score = 34.3 bits (75), Expect = 0.014
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 18 KMLQKLGWTEGQGLGAEGSGIVDPINKANQPVANLGLGASTSDVVSPED 164
+++ ++ + EG GLG G GI+DPIN + G+G S S D
Sbjct: 104 RLMAQMNYEEGTGLGKYGHGIIDPINPTKK-YGKGGVGKFESSYDSDSD 151
>04_04_0422 +
25098612-25099025,25099500-25099633,25099817-25100067,
25100130-25100494
Length = 387
Score = 34.3 bits (75), Expect = 0.014
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 18 KMLQKLGWTEGQGLGAEGSGIVDPINKANQPVANLGLGASTSDVVSPED 164
+++ ++ + EG GLG G GI+DPIN + G+G S S D
Sbjct: 37 RLMAQMNYEEGTGLGKYGHGIIDPINPTKK-YGKGGVGKFESSYDSDSD 84
>01_05_0604 - 23583244-23584989
Length = 581
Score = 31.1 bits (67), Expect = 0.13
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 18 KMLQKLGWTEGQGLGAEGSGIVDPI 92
+++ ++ + EG GLG G GI+DPI
Sbjct: 103 RLMAQMNYEEGAGLGKYGHGIIDPI 127
>08_02_0732 +
20521459-20522323,20522404-20522480,20523251-20523296,
20523482-20523713,20524244-20524439
Length = 471
Score = 29.9 bits (64), Expect = 0.30
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 124 PRLATGWLALLMGSTIPEPSAPNP*PSVQPSFCSILKPT 8
P +T W + + ST P P+ P P ++ P+ S+L P+
Sbjct: 150 PYHSTAWPSSSLCSTSPAPAPPPPPAALDPTTSSLLSPS 188
>09_04_0529 +
18356964-18358307,18359829-18359944,18360036-18360133,
18360234-18360418
Length = 580
Score = 28.3 bits (60), Expect = 0.91
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 142 DVDAPRPRLATGWLALLMGSTIPEPSAPNP*PSVQPSFCSILKPT 8
D + P P L L L G+ IP P A +P PSF + PT
Sbjct: 4 DGETPMPSLELHKLPTLAGAAIPNPIARHPLYHPSPSF--FISPT 46
>04_03_0771 + 19434460-19434987
Length = 175
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 97 LLMGSTIPEPSAPNP*PSVQPSFCSILKPT 8
+L ++P S+P P PS +PS ++ +PT
Sbjct: 102 VLSRRSLPPESSPPPPPSPEPSTAAVAEPT 131
>03_02_0392 - 8070342-8071628
Length = 428
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 12 GFKMLQKLGWTEGQGLGAEGSGIVDPINKANQPVANLGLGASTSD 146
G +L GW+EG+G+G G + + ++ GLG + S+
Sbjct: 186 GAALLAGYGWSEGKGIGRNNKGDTKVV-EYDRRAGTQGLGYNPSE 229
>07_01_0383 -
2856777-2858042,2858238-2858270,2858607-2858742,
2860778-2860890
Length = 515
Score = 26.6 bits (56), Expect = 2.8
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +3
Query: 78 IVDPINKANQPVANLGLGASTSD 146
++DP+ QPVA++G+ ++SD
Sbjct: 336 VLDPVKGVWQPVASMGMNMASSD 358
>02_01_0279 -
1860410-1860508,1861536-1861889,1862660-1862805,
1862885-1862925,1863010-1863173,1863217-1863281,
1863410-1863670,1863754-1863817,1863946-1864006,
1864112-1864473
Length = 538
Score = 26.6 bits (56), Expect = 2.8
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Frame = -3
Query: 136 DAPRPRLA------TGWLALLMGSTIPEPSAPNP*PSVQP 35
DAPR A T + LL GS P+P+ P P P +QP
Sbjct: 57 DAPREGAAAARTPFTPFEELLEGSCDPDPTPPPPLPPLQP 96
>01_01_0499 -
3675303-3675484,3676888-3676982,3677046-3677096,
3677191-3677270,3677423-3677593,3677836-3677937,
3678092-3678244,3678392-3678523,3678702-3678788,
3678987-3679126,3679246-3679660
Length = 535
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 127 RPRLATGWLALLMGSTIPEPSAP 59
RP L GW+ L + +PE SAP
Sbjct: 502 RPLLGCGWMYLPPVNNVPESSAP 524
>01_01_0960 +
7546081-7546161,7546439-7546537,7546650-7546706,
7547106-7547261,7547350-7547434,7547572-7547662,
7547776-7547940,7548025-7548144,7548243-7548315,
7548397-7548562,7548647-7549290,7550080-7550258,
7550346-7550469
Length = 679
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 82 TIPEPSAPNP*PSVQPSFCSILKPT 8
T+P+P P V SFC IL P+
Sbjct: 85 TLPDPPLPEQPRPVVHSFCKILTPS 109
>12_01_0907 + 8818357-8819033,8819077-8821352,8821465-8821730
Length = 1072
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 84 DPINKANQPVANLGLGASTSDVVSPEDDEFD 176
D NKA P A++ + DV+ DDEFD
Sbjct: 600 DDSNKAIGPAASVTRKSIPKDVMVISDDEFD 630
>11_03_0072 +
9605273-9606814,9616982-9617016,9617271-9617348,
9617427-9617501,9617583-9617657,9617731-9617977,
9618070-9618313,9618852-9619309,9619388-9619675,
9619751-9619788,9619882-9620452
Length = 1216
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 3 TRVGFKMLQKLGWTEGQGLGAEGSGIVDPINKANQ 107
T V +L L WTEG +G+GI P+ + N+
Sbjct: 573 TPVTRSVLPSLDWTEGNPAEKDGAGI--PMERLNE 605
>02_04_0621 -
24502383-24502476,24502532-24504015,24504125-24504177,
24504871-24504984,24505068-24505202,24505960-24506055,
24506692-24506827
Length = 703
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -3
Query: 148 TSDVDAPRPRLATGWLALLMGSTIPEPSAPNP*PSVQPSFCS 23
+S + PRP + A + +PEPS+P P + F S
Sbjct: 16 SSSMKPPRPPRGPSFQAPAVPRPLPEPSSPGGRPRKRVRFAS 57
>12_01_0113 -
864380-865027,865419-866408,867128-867194,868377-868468
Length = 598
Score = 25.0 bits (52), Expect = 8.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 24 LQKLGWTEGQGLGAEGSGIVDPINKANQPVANLGLGA 134
+ + G +G+G G G ++ I++ +A LG+GA
Sbjct: 512 VMRQGMRDGRGGGEHGRALLASISRGIGRIAMLGVGA 548
>07_03_0522 -
19021915-19022649,19022725-19023012,19023091-19023548,
19023939-19024329,19024422-19024668,19024742-19024815,
19024905-19024961
Length = 749
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 18 KMLQKLGWTEGQGLGAEGSGIVDPINKANQ 107
K L WTEG EG+GI P+ + N+
Sbjct: 20 KYAPSLDWTEGNPAEKEGAGI--PMERLNE 47
>05_06_0079 +
25415534-25415582,25415679-25415749,25415852-25415928,
25416190-25416337,25416980-25417141,25417552-25417989
Length = 314
Score = 25.0 bits (52), Expect = 8.5
Identities = 11/51 (21%), Positives = 24/51 (47%)
Frame = +3
Query: 18 KMLQKLGWTEGQGLGAEGSGIVDPINKANQPVANLGLGASTSDVVSPEDDE 170
+ L+++ + G G+ G+G V ++ + G+ S S +DD+
Sbjct: 209 RRLRRVAFPPGSGVTVTGTGAVTDSGYLSEATSEYGVNPSISSSSGGDDDD 259
>01_05_0024 -
17262504-17263308,17264251-17264399,17264879-17264978,
17265829-17265953,17267565-17267743,17269648-17270698
Length = 802
Score = 25.0 bits (52), Expect = 8.5
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -3
Query: 151 TTSDVDAPRPRLATGWLALLMGSTIPEPSAPNP 53
TT P P++AT W +T P P+ P
Sbjct: 219 TTPPPPMPEPQMATTWDYFFGPTTTPPPTLEQP 251
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,982,062
Number of Sequences: 37544
Number of extensions: 99798
Number of successful extensions: 385
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 384
length of database: 14,793,348
effective HSP length: 61
effective length of database: 12,503,164
effective search space used: 262566444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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