Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_P06
         (249 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    21   5.1  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    21   8.8  
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       21   8.8  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    21   8.8  

>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +3

Query: 57  LGAEGSGIVDPINKANQPVANLGLGASTSDVVSP 158
           LG    G  DP      P+AN+G    ++  + P
Sbjct: 29  LGHSTPGSFDPQGYFTPPIANVGYRDGSTREIDP 62


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 76  PEPSAPNP*PSVQPS 32
           P PS P P PS + S
Sbjct: 430 PTPSVPRPLPSQEAS 444


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 81  VDPINKANQPVANLGL 128
           +D  ++A +P+A LGL
Sbjct: 405 IDTTSRAEKPLAKLGL 420


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 33   LGWTEGQGLGAEGS 74
            L   EG+G+G EGS
Sbjct: 966  LALDEGKGVGVEGS 979


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,145
Number of Sequences: 2352
Number of extensions: 3386
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 12740367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)