Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_P06
(249 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000263-13|AAO21393.1| 695|Caenorhabditis elegans Hypothetical... 46 4e-06
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 46 4e-06
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 46 4e-06
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 46 4e-06
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 46 4e-06
AL032649-4|CAA21703.2| 511|Caenorhabditis elegans Hypothetical ... 46 5e-06
AL032649-3|CAA21702.2| 502|Caenorhabditis elegans Hypothetical ... 46 5e-06
Z49908-1|CAA90093.1| 816|Caenorhabditis elegans Hypothetical pr... 39 5e-04
DQ342049-1|ABC69941.1| 830|Caenorhabditis elegans STIP protein. 39 5e-04
Z81094-5|CAB03149.2| 675|Caenorhabditis elegans Hypothetical pr... 37 0.002
AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CT... 37 0.002
Z68319-3|CAA92701.1| 339|Caenorhabditis elegans Hypothetical pr... 37 0.002
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 36 0.005
U41007-19|AAA82274.1| 432|Caenorhabditis elegans Hypothetical p... 32 0.047
AF003384-11|AAL08042.1| 487|Caenorhabditis elegans Hypothetical... 31 0.082
AF003384-10|AAB54241.3| 351|Caenorhabditis elegans Hypothetical... 31 0.082
AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical... 31 0.11
Z46934-6|CAA87045.3| 371|Caenorhabditis elegans Hypothetical pr... 31 0.14
Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical pr... 30 0.25
Z81497-1|CAB04077.1| 1081|Caenorhabditis elegans Hypothetical pr... 27 1.8
U40801-5|AAO91727.1| 777|Caenorhabditis elegans Hypothetical pr... 27 1.8
U40801-4|AAO91728.1| 873|Caenorhabditis elegans Hypothetical pr... 27 1.8
U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical pr... 27 1.8
AC024859-12|AAK29966.1| 477|Caenorhabditis elegans Hypothetical... 27 1.8
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 27 2.3
U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated p... 26 3.1
AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical ... 26 3.1
AC024759-4|AAK68434.1| 356|Caenorhabditis elegans Hypothetical ... 26 3.1
Z70310-2|CAA94367.1| 462|Caenorhabditis elegans Hypothetical pr... 25 5.4
AF077533-2|AAP40529.1| 972|Caenorhabditis elegans Hypothetical ... 25 5.4
AF077533-1|AAZ91357.1| 1126|Caenorhabditis elegans Hypothetical ... 25 5.4
Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 25 7.1
AL110484-20|CAB54412.1| 195|Caenorhabditis elegans Hypothetical... 25 7.1
AC024759-3|AAK68433.1| 355|Caenorhabditis elegans Hypothetical ... 25 7.1
AC024759-2|AAM97964.1| 376|Caenorhabditis elegans Hypothetical ... 25 7.1
AC024759-1|AAK73907.1| 376|Caenorhabditis elegans Hypothetical ... 25 7.1
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p... 25 9.4
>AF000263-13|AAO21393.1| 695|Caenorhabditis elegans Hypothetical
protein T08B2.5g protein.
Length = 695
Score = 46.0 bits (104), Expect = 4e-06
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +3
Query: 3 TRVGFKMLQKLGWTEGQGLGAEGSGIVDPINKANQPVANLGLGASTS 143
+ +G ++L+ +GW EGQG+G GIV+PI +A + V GLGA+ S
Sbjct: 625 SNIGNRLLKSMGWKEGQGVGKHAQGIVNPI-EAERFVQGAGLGAAGS 670
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 46.0 bits (104), Expect = 4e-06
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +3
Query: 3 TRVGFKMLQKLGWTEGQGLGAEGSGIVDPINKANQPVANLGLGASTS 143
+ +G ++L+ +GW EGQG+G GIV+PI +A + V GLGA+ S
Sbjct: 768 SNIGNRLLKSMGWKEGQGVGKHAQGIVNPI-EAERFVQGAGLGAAGS 813
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 46.0 bits (104), Expect = 4e-06
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +3
Query: 3 TRVGFKMLQKLGWTEGQGLGAEGSGIVDPINKANQPVANLGLGASTS 143
+ +G ++L+ +GW EGQG+G GIV+PI +A + V GLGA+ S
Sbjct: 796 SNIGNRLLKSMGWKEGQGVGKHAQGIVNPI-EAERFVQGAGLGAAGS 841
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 46.0 bits (104), Expect = 4e-06
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +3
Query: 3 TRVGFKMLQKLGWTEGQGLGAEGSGIVDPINKANQPVANLGLGASTS 143
+ +G ++L+ +GW EGQG+G GIV+PI +A + V GLGA+ S
Sbjct: 854 SNIGNRLLKSMGWKEGQGVGKHAQGIVNPI-EAERFVQGAGLGAAGS 899
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 46.0 bits (104), Expect = 4e-06
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +3
Query: 3 TRVGFKMLQKLGWTEGQGLGAEGSGIVDPINKANQPVANLGLGASTS 143
+ +G ++L+ +GW EGQG+G GIV+PI +A + V GLGA+ S
Sbjct: 855 SNIGNRLLKSMGWKEGQGVGKHAQGIVNPI-EAERFVQGAGLGAAGS 900
>AL032649-4|CAA21703.2| 511|Caenorhabditis elegans Hypothetical
protein Y55D9A.2b protein.
Length = 511
Score = 45.6 bits (103), Expect = 5e-06
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +3
Query: 9 VGFKMLQKLGWTEGQGLGAEGSGIVDPINKANQPVAN-LGLGASTSD 146
VGFK+L+ +GW+EGQGLG E G V+P+ A + N GLGA+ +
Sbjct: 436 VGFKLLKSMGWSEGQGLGKEKQGHVEPV--ATEVKNNRKGLGANEKE 480
>AL032649-3|CAA21702.2| 502|Caenorhabditis elegans Hypothetical
protein Y55D9A.2a protein.
Length = 502
Score = 45.6 bits (103), Expect = 5e-06
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +3
Query: 9 VGFKMLQKLGWTEGQGLGAEGSGIVDPINKANQPVAN-LGLGASTSD 146
VGFK+L+ +GW+EGQGLG E G V+P+ A + N GLGA+ +
Sbjct: 436 VGFKLLKSMGWSEGQGLGKEKQGHVEPV--ATEVKNNRKGLGANEKE 480
>Z49908-1|CAA90093.1| 816|Caenorhabditis elegans Hypothetical
protein C07E3.1a protein.
Length = 816
Score = 38.7 bits (86), Expect = 5e-04
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +3
Query: 18 KMLQKLGWTEGQGLGAEGSGIVDPI 92
KM+Q +G+ G+GLGA+G GIV+P+
Sbjct: 145 KMMQAMGYKPGEGLGAQGQGIVEPV 169
>DQ342049-1|ABC69941.1| 830|Caenorhabditis elegans STIP protein.
Length = 830
Score = 38.7 bits (86), Expect = 5e-04
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +3
Query: 18 KMLQKLGWTEGQGLGAEGSGIVDPI 92
KM+Q +G+ G+GLGA+G GIV+P+
Sbjct: 159 KMMQAMGYKPGEGLGAQGQGIVEPV 183
>Z81094-5|CAB03149.2| 675|Caenorhabditis elegans Hypothetical
protein F58G11.5 protein.
Length = 675
Score = 37.1 bits (82), Expect = 0.002
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = +3
Query: 12 GFKMLQKLGWTEGQGLGAEGSGIVDPINKA---NQPVANLGLGAS 137
G +++ K+GW G+GLGA SGIVDP++ N+ +GLG S
Sbjct: 608 GAQLMAKMGWG-GKGLGANESGIVDPVSGGEVRNRNEQFMGLGRS 651
>AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CTD
associated factor 6 protein.
Length = 675
Score = 37.1 bits (82), Expect = 0.002
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = +3
Query: 12 GFKMLQKLGWTEGQGLGAEGSGIVDPINKA---NQPVANLGLGAS 137
G +++ K+GW G+GLGA SGIVDP++ N+ +GLG S
Sbjct: 608 GAQLMAKMGWG-GKGLGANESGIVDPVSGGEVRNRNEQFMGLGRS 651
>Z68319-3|CAA92701.1| 339|Caenorhabditis elegans Hypothetical
protein T23G7.3 protein.
Length = 339
Score = 36.7 bits (81), Expect = 0.002
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 18 KMLQKLGWTEGQGLGAEGSGIVDPIN-KANQPVANLGLGA 134
K+++K+GW+EG GLG G D + KAN + GLGA
Sbjct: 32 KLMEKMGWSEGDGLGRNRQGNADSVKLKAN--TSGRGLGA 69
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 35.5 bits (78), Expect = 0.005
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 9 VGFKMLQKLGWTEGQGLGAEGSGIVDPI 92
+G ML+K+GW G+GLG + +G ++P+
Sbjct: 640 IGRLMLEKMGWRPGEGLGKDATGNLEPL 667
>U41007-19|AAA82274.1| 432|Caenorhabditis elegans Hypothetical
protein C33H5.17 protein.
Length = 432
Score = 32.3 bits (70), Expect = 0.047
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 9 VGFKMLQKLGWTEGQGLGAEGSGIVDPI 92
VG K++ K+G+ G+GLG GIV I
Sbjct: 251 VGMKLMMKMGYKVGEGLGKRSDGIVHAI 278
>AF003384-11|AAL08042.1| 487|Caenorhabditis elegans Hypothetical
protein K07B1.7b protein.
Length = 487
Score = 31.5 bits (68), Expect = 0.082
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 9 VGFKMLQKLGWTEGQGLGAEGSGIVDPI 92
+G ML K+GW G GLG G V P+
Sbjct: 399 IGGSMLAKMGWKPGTGLGKNEQGRVVPV 426
>AF003384-10|AAB54241.3| 351|Caenorhabditis elegans Hypothetical
protein K07B1.7a protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.082
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 9 VGFKMLQKLGWTEGQGLGAEGSGIVDPI 92
+G ML K+GW G GLG G V P+
Sbjct: 247 IGGSMLAKMGWKPGTGLGKNEQGRVVPV 274
>AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical
protein Y53F4B.13 protein.
Length = 927
Score = 31.1 bits (67), Expect = 0.11
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 9 VGFKMLQKLGWTEGQGLGAEGSGIVDPINKANQPVANLGLGASTSDVVSPEDDE 170
V +++ +G G+GLG G GI +PI + Q GLG + + + +E
Sbjct: 89 VAERLMAAMGHKAGEGLGKHGQGISEPIASSTQR-GRTGLGHNAGKATARDFNE 141
>Z46934-6|CAA87045.3| 371|Caenorhabditis elegans Hypothetical
protein ZK1320.7 protein.
Length = 371
Score = 30.7 bits (66), Expect = 0.14
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 3 TRVGFKMLQKLGWTEGQGLGAEGSGIVDPI 92
+ +G++++ GWTE QGLG G PI
Sbjct: 264 SNIGYRLMCASGWTEEQGLGRNSDGQRFPI 293
>Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical
protein R07E5.1 protein.
Length = 812
Score = 29.9 bits (64), Expect = 0.25
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +3
Query: 9 VGFKMLQKLGWTEGQGLG 62
+G +ML+ +GW EG+G+G
Sbjct: 148 IGVRMLRSMGWREGRGIG 165
>Z81497-1|CAB04077.1| 1081|Caenorhabditis elegans Hypothetical
protein F10C2.4 protein.
Length = 1081
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 48 GQGLGAEGSGIVDPINK-ANQPVANL 122
G G G EG+ ++DPI N+P+A L
Sbjct: 548 GDGEGYEGATVIDPIRGFYNEPIATL 573
>U40801-5|AAO91727.1| 777|Caenorhabditis elegans Hypothetical
protein F28E10.1b protein.
Length = 777
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 236 WIIQRVRPETIREHHTFPVR 177
+I+ PE IR HHTF +R
Sbjct: 316 FILTMKTPEAIRRHHTFTIR 335
>U40801-4|AAO91728.1| 873|Caenorhabditis elegans Hypothetical
protein F28E10.1c protein.
Length = 873
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 236 WIIQRVRPETIREHHTFPVR 177
+I+ PE IR HHTF +R
Sbjct: 412 FILTMKTPEAIRRHHTFTIR 431
>U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical
protein F28E10.1a protein.
Length = 1134
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 236 WIIQRVRPETIREHHTFPVR 177
+I+ PE IR HHTF +R
Sbjct: 458 FILTMKTPEAIRRHHTFTIR 477
>AC024859-12|AAK29966.1| 477|Caenorhabditis elegans Hypothetical
protein Y71H2AM.16 protein.
Length = 477
Score = 27.1 bits (57), Expect = 1.8
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +3
Query: 6 RVGFKMLQKLGWTEGQGLG-AEGSGI-VDPINKANQPVANLGLGASTSDVVSP 158
++GF + +G+ GQGLG G G+ +D +N+++ A L DV+ P
Sbjct: 355 KLGFGLSHMIGFGSGQGLGLGLGLGLGLDILNRSSPESAPRELRLPGCDVLCP 407
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 26.6 bits (56), Expect = 2.3
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 85 STIPEPSAPNP*PSVQP 35
ST+P P PNP P+ QP
Sbjct: 823 STLPPPPPPNPPPAPQP 839
>U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated
protein 104, isoformb protein.
Length = 1628
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -3
Query: 214 LKRYASIIRFLYAXXXXXSGETTSDVDAPRPRLATGWLALL 92
LK+ +R Y +G + VD P P +A GWLA L
Sbjct: 781 LKQRLEDMRIFYNSELSVAG---TPVDVPYPPVAEGWLAAL 818
>AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical
protein M01B12.4c protein.
Length = 678
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 151 TTSDVDAPRPRLATGWLALLMGSTIPEPSAPNP*PSVQPS 32
T D+ P + + L LL S PEPS+ + P+ QPS
Sbjct: 583 TADDIKDSTPAVTSASLPLLPSS--PEPSSSSSSPAQQPS 620
>AC024759-4|AAK68434.1| 356|Caenorhabditis elegans Hypothetical
protein Y37E11AR.4 protein.
Length = 356
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 39 WTEGQGLGAEGSGIVDPIN 95
W + QG+GA+GS V +N
Sbjct: 176 WMKNQGIGADGSNTVTELN 194
>Z70310-2|CAA94367.1| 462|Caenorhabditis elegans Hypothetical
protein R11A8.2 protein.
Length = 462
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +3
Query: 12 GFKMLQKLGWTEGQGLGAEGSGIVDPINKANQPVANLGLGASTSDVV 152
G +L+ W +G G+G + + N+ LGLGA+ + V
Sbjct: 158 GLAILRGCNWKDGDGIGKNPQKVA--LKLPNRRPPGLGLGATPKNPV 202
>AF077533-2|AAP40529.1| 972|Caenorhabditis elegans Hypothetical
protein F54G2.1b protein.
Length = 972
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 120 LGLGASTSDVVSPEDDEFDAYRKRMMLAYR 209
L L D+++ FD+Y KRMM+ +R
Sbjct: 436 LTLDKEEEDMLTDSFSSFDSYCKRMMIEHR 465
>AF077533-1|AAZ91357.1| 1126|Caenorhabditis elegans Hypothetical
protein F54G2.1a protein.
Length = 1126
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 120 LGLGASTSDVVSPEDDEFDAYRKRMMLAYR 209
L L D+++ FD+Y KRMM+ +R
Sbjct: 420 LTLDKEEEDMLTDSFSSFDSYCKRMMIEHR 449
>Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical
protein F53C11.5c protein.
Length = 830
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 85 STIPEPSAPNP*PSVQPS 32
S IP PS P+P PS P+
Sbjct: 422 SNIPPPSLPSPRPSALPA 439
>Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical
protein F53C11.5b protein.
Length = 891
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 85 STIPEPSAPNP*PSVQPS 32
S IP PS P+P PS P+
Sbjct: 483 SNIPPPSLPSPRPSALPA 500
>Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical
protein F53C11.5a protein.
Length = 855
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 85 STIPEPSAPNP*PSVQPS 32
S IP PS P+P PS P+
Sbjct: 447 SNIPPPSLPSPRPSALPA 464
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 120 LGLGASTSDVVSPEDDEFDAYRKR 191
+GL S ++ EDD+ +AY KR
Sbjct: 666 VGLALSDKNIRFKEDDQVEAYEKR 689
>AL110484-20|CAB54412.1| 195|Caenorhabditis elegans Hypothetical
protein Y38E10A.20 protein.
Length = 195
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 90 INKANQPVANLGLGASTSDVVSPEDDEF 173
+N A P +G+GA V+PE D +
Sbjct: 150 LNAAETPTTPIGVGAGVRKNVTPECDRY 177
>AC024759-3|AAK68433.1| 355|Caenorhabditis elegans Hypothetical
protein Y37E11AR.3a protein.
Length = 355
Score = 25.0 bits (52), Expect = 7.1
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 39 WTEGQGLGAEGS 74
W EGQG+G +GS
Sbjct: 174 WMEGQGIGVDGS 185
>AC024759-2|AAM97964.1| 376|Caenorhabditis elegans Hypothetical
protein Y37E11AR.3c protein.
Length = 376
Score = 25.0 bits (52), Expect = 7.1
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 39 WTEGQGLGAEGS 74
W EGQG+G +GS
Sbjct: 195 WMEGQGIGVDGS 206
>AC024759-1|AAK73907.1| 376|Caenorhabditis elegans Hypothetical
protein Y37E11AR.3b protein.
Length = 376
Score = 25.0 bits (52), Expect = 7.1
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 39 WTEGQGLGAEGS 74
W EGQG+G +GS
Sbjct: 195 WMEGQGIGVDGS 206
>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
protein R11G1.1 protein.
Length = 1656
Score = 24.6 bits (51), Expect = 9.4
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -3
Query: 208 RYASIIRFLYAXXXXXSGETTSDVDAPRPRLATGWLALLMGSTIPEPS 65
R++ R+++ + E TSDVD PR A ++ IP+ S
Sbjct: 1387 RFSMAPRYVFKRKVVEASEETSDVDMPRLSPARHAPPVVSSPEIPDVS 1434
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,907,350
Number of Sequences: 27780
Number of extensions: 74521
Number of successful extensions: 244
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 12,740,198
effective HSP length: 62
effective length of database: 11,017,838
effective search space used: 220356760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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