Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_P06
         (249 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   1.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   1.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          19   7.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      19   7.1  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    19   9.3  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 1.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 150 VSPEDDEFDAYRKRMMLAYRF 212
           VSP   E++ Y  R+   Y+F
Sbjct: 622 VSPVSSEYNQYNSRIWGGYKF 642


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 1.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 150 VSPEDDEFDAYRKRMMLAYRF 212
           VSP   E++ Y  R+   Y+F
Sbjct: 622 VSPVSSEYNQYNSRIWGGYKF 642


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 19.4 bits (38), Expect = 7.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 21  MLQKLGWTEGQGLGAEGSGIVDPIN 95
           ++QK  W   QG+    + I  P+N
Sbjct: 77  VVQKFLWWYKQGMFLSRNAIFTPLN 101


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 19.4 bits (38), Expect = 7.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 21  MLQKLGWTEGQGLGAEGSGIVDPIN 95
           ++QK  W   QG+    + I  P+N
Sbjct: 77  VVQKFLWWYKQGMFLSRNAIFTPLN 101


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +3

Query: 45  EGQGLGAEGSGIVDPINKANQPVANLGLGASTSDVVSPEDD 167
           E + LG+E S    P ++     +N+      SD +   DD
Sbjct: 71  EIEKLGSERSKSRSPDSRDRSNTSNISKTVILSDKLESSDD 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,661
Number of Sequences: 438
Number of extensions: 998
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4401495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)