Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_P05
         (250 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   3.4  
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      20   4.5  
AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone recepto...    19   7.9  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 79  GSITTFMQFLIDFDLS 32
           G++TT++   I FD S
Sbjct: 372 GAVTTYLVIFIQFDQS 387


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 3.4
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +2

Query: 2    HEDDAKNPFLAQIKVNKELHKGGDR 76
            H +DA   F     ++  + KG DR
Sbjct: 2034 HPEDADATFNTNFTIHYWIEKGADR 2058



 Score = 19.0 bits (37), Expect = 7.9
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 95   LDISDSKMRYEAGDHVAVYPIND 163
            LD+ D K R   G H  +  +N+
Sbjct: 2663 LDLDDFKNRCGCGKHPLLKTLNN 2685


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 19.8 bits (39), Expect = 4.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 100 IQFNMKTGSITTFMQFLIDF 41
           + FN    ++ TF++  IDF
Sbjct: 36  VSFNQTAQNVDTFVREQIDF 55


>AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone receptor
           (isoform B) protein.
          Length = 96

 Score = 19.0 bits (37), Expect = 7.9
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -2

Query: 111 ESEISNST*RQDLSP 67
           +S+ S+++ R+DLSP
Sbjct: 81  KSDTSSASGREDLSP 95


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,570
Number of Sequences: 336
Number of extensions: 916
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  3737755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)