Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_P05
(250 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21322-8|AAA62544.1| 662|Caenorhabditis elegans Abnormal embroy... 87 1e-18
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 26 3.1
U53147-2|AAA96114.2| 935|Caenorhabditis elegans Hypothetical pr... 26 4.1
U41007-19|AAA82274.1| 432|Caenorhabditis elegans Hypothetical p... 26 4.1
Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 25 7.1
AY079165-1|AAL86012.1| 585|Caenorhabditis elegans NADPH-depende... 25 7.1
AL132858-12|CAB60480.1| 585|Caenorhabditis elegans Hypothetical... 25 7.1
Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z68752-4|CAA92983.1| 447|Caenorhabditis elegans Hypothetical pr... 25 9.4
U50310-4|ABB51170.1| 409|Caenorhabditis elegans Hypothetical pr... 25 9.4
U50310-3|AAA92540.4| 411|Caenorhabditis elegans Hypothetical pr... 25 9.4
AL032633-2|CAA21595.2| 428|Caenorhabditis elegans Hypothetical ... 25 9.4
AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein. 25 9.4
>U21322-8|AAA62544.1| 662|Caenorhabditis elegans Abnormal
embroygenesis protein 8 protein.
Length = 662
Score = 87.4 bits (207), Expect = 1e-18
Identities = 38/81 (46%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Frame = +2
Query: 11 DAKNPFLAQIKVNKELH-KGGDRSCLHVELDISDSKMRYEAGDHVAVYPINDTKLVERLG 187
D KNP+LA + +N ELH + DRSC H+E + S++RYEAGDH+AV+P ND LV+RL
Sbjct: 268 DVKNPYLATVAINDELHTEHSDRSCRHIEFSVEGSRIRYEAGDHLAVFPTNDPVLVDRLI 327
Query: 188 ELTGANLDEIFSLMNTDQEST 250
+ + D F L+N D++++
Sbjct: 328 NMLQFDPDHAFRLVNVDEDAS 348
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 26.2 bits (55), Expect = 3.1
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -3
Query: 218 ISHQGLLRSVLRDVLLI*YHLSDIQLRGHQLHNAFLSLK--YPIQHEDRIY 72
I+ G L + L + +L Y+ S +Q + LSL YP+QHED Y
Sbjct: 724 ITESGWLMAHLANRVLKNYNSSQVQHDYTLYLRSLLSLSWTYPVQHEDMEY 774
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 26.2 bits (55), Expect = 3.1
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -3
Query: 218 ISHQGLLRSVLRDVLLI*YHLSDIQLRGHQLHNAFLSLK--YPIQHEDRIY 72
I+ G L + L + +L Y+ S +Q + LSL YP+QHED Y
Sbjct: 724 ITESGWLMAHLANRVLKNYNSSQVQHDYTLYLRSLLSLSWTYPVQHEDMEY 774
>U53147-2|AAA96114.2| 935|Caenorhabditis elegans Hypothetical
protein C01B7.1a protein.
Length = 935
Score = 25.8 bits (54), Expect = 4.1
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = -2
Query: 237 SVFMRENISSRFAPVSSPRRSTNLVSFIGYTATWSPAS*RIFESEISNST*RQDLSPPLC 58
S+F +E+ P ++PR +LVS + + SPA + E ++S +++ P +
Sbjct: 644 SLFAQESKRKNKFPAAAPREHKDLVSMVSSSHEASPAV-PVDEEASNDSAIKEEEKPLIL 702
Query: 57 N 55
N
Sbjct: 703 N 703
>U41007-19|AAA82274.1| 432|Caenorhabditis elegans Hypothetical
protein C33H5.17 protein.
Length = 432
Score = 25.8 bits (54), Expect = 4.1
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 98 DISDSKMRYEAGDHVAVYPINDTKLVERLGELTGANLDEIFSLMNTDQEST 250
++ + K + + D + V N+ VE E T +L+E+ SLM D+E T
Sbjct: 3 ELENLKDQIKRIDEMIVQETNEETRVEY--EQTKMDLEELVSLMEEDEEKT 51
>Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical
protein T05H10.1 protein.
Length = 1326
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 110 SKMRYEAGDHVAVYPINDTKLVERLGELTGANLDEIFSLM 229
S RY+ ++V V D V+ + + +G N+ E+FS+M
Sbjct: 371 SPNRYQGSENVCVGQPIDHAAVDDIVKTSGDNVYELFSVM 410
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical
protein F55H12.3 protein.
Length = 2972
Score = 25.0 bits (52), Expect = 7.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 94 FNMKTGSITTFMQFLIDFDLSQEWI 20
F +K GS + + FLID DL EWI
Sbjct: 502 FELKPGSESVDV-FLIDSDLEIEWI 525
>AY079165-1|AAL86012.1| 585|Caenorhabditis elegans NADPH-dependent
flavin reductase protein.
Length = 585
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 89 VELDISD---SKMRYEAGDHVAVYPINDTKLVERLGELTGANLDEI 217
V+ +ISD SKM ++ GD + V P N + V+ E G +++
Sbjct: 229 VDFEISDRNRSKMGFQPGDVLMVRPYNPEETVKIAIEALGLTEEQL 274
>AL132858-12|CAB60480.1| 585|Caenorhabditis elegans Hypothetical
protein Y113G7A.8 protein.
Length = 585
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 89 VELDISD---SKMRYEAGDHVAVYPINDTKLVERLGELTGANLDEI 217
V+ +ISD SKM ++ GD + V P N + V+ E G +++
Sbjct: 229 VDFEISDRNRSKMGFQPGDVLMVRPYNPEETVKIAIEALGLTEEQL 274
>Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical
protein C47D12.7 protein.
Length = 618
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 2 HEDDAKNPFLAQIKVNKELHKGGD 73
HE+ ++ PFLA++ N L GD
Sbjct: 244 HEEPSRRPFLAELMSNVRLPLLGD 267
>Z68752-4|CAA92983.1| 447|Caenorhabditis elegans Hypothetical
protein T12G3.4 protein.
Length = 447
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = +2
Query: 35 QIKVNKELHKGGDRSCLHVELDISDSKMRYEAGDHVAVYPINDTKLVERL 184
Q+ + K + K L+ E+ ++ + DH + P+ + L+E L
Sbjct: 285 QLSIEKGMGKNAPWRVLYSEMGLARVMQIWVPRDHYSTAPVKTSPLIENL 334
>U50310-4|ABB51170.1| 409|Caenorhabditis elegans Hypothetical
protein ZC487.1b protein.
Length = 409
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 161 HLSDIQLRGHQL-HNAFLSLKYPIQHEDRIYHHLYAIP 51
+L I +RG+ HN L + ++ + HLYA+P
Sbjct: 236 YLGLIFIRGYYKDHNEIFFLGFGLEPDSETARHLYALP 273
>U50310-3|AAA92540.4| 411|Caenorhabditis elegans Hypothetical
protein ZC487.1a protein.
Length = 411
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 161 HLSDIQLRGHQL-HNAFLSLKYPIQHEDRIYHHLYAIP 51
+L I +RG+ HN L + ++ + HLYA+P
Sbjct: 238 YLGLIFIRGYYKDHNEIFFLGFGLEPDSETARHLYALP 275
>AL032633-2|CAA21595.2| 428|Caenorhabditis elegans Hypothetical
protein Y106G6A.2a protein.
Length = 428
Score = 24.6 bits (51), Expect = 9.4
Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +2
Query: 83 LHVELDISDSKMRYEAGDH----VAVYPINDTKLVERLGELTGANLDEIFSLMNTDQ 241
L + + +S +K++Y H +A + +ND + R+G +L E+ +L+ +
Sbjct: 354 LCIFIGMSHTKLKYTDPHHNLIALASFVVNDYNNINRIGSRPMCDLSEVHALIEAQR 410
>AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein.
Length = 618
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 2 HEDDAKNPFLAQIKVNKELHKGGD 73
HE+ ++ PFLA++ N L GD
Sbjct: 244 HEEPSRRPFLAELMSNVRLPLLGD 267
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,109,340
Number of Sequences: 27780
Number of extensions: 81733
Number of successful extensions: 247
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 12,740,198
effective HSP length: 62
effective length of database: 11,017,838
effective search space used: 220356760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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