Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_P05
         (250 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    29   0.007
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   1.3  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    20   5.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    19   7.1  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          19   7.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    19   7.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   7.1  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 29.5 bits (63), Expect = 0.007
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +2

Query: 98  DISDSKMRYEAGDHVAVYPINDTKLVERL 184
           DI+  ++ Y+ GDH+ V+  N ++LVE +
Sbjct: 743 DIASMEILYKPGDHLGVFACNRSELVEAI 771


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 1.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 137 GHQLHNAFLSLKYPIQHEDR 78
           G+QL+ +F S  YP Q+  +
Sbjct: 15  GNQLNRSFYSASYPPQNRSQ 34


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 19.8 bits (39), Expect = 5.3
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 9   MTRRIHSWLKSKSIRN 56
           +  R+ SW+ +  IRN
Sbjct: 268 LASRVESWVNTSVIRN 283


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 19.4 bits (38), Expect = 7.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  LKSKSIRNCIKVVIDPV 83
           +KSK  +N  + ++DPV
Sbjct: 155 MKSKKEQNAEEDIVDPV 171


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 19.4 bits (38), Expect = 7.1
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 38  FEPRMDSSRH 9
           FEPR   SRH
Sbjct: 166 FEPRATDSRH 175


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.4 bits (38), Expect = 7.1
 Identities = 13/52 (25%), Positives = 20/52 (38%)
 Frame = -2

Query: 162  SFIGYTATWSPAS*RIFESEISNST*RQDLSPPLCNSLLTLI*AKNGFFASS 7
            S  GYT  +  A   + E ++S      +L   LC +   L    +    SS
Sbjct: 1433 SLTGYTLHYRTAHGNLDELQLSRHATSHELKGLLCGNTYQLYLTSHNKIGSS 1484


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.4 bits (38), Expect = 7.1
 Identities = 13/52 (25%), Positives = 20/52 (38%)
 Frame = -2

Query: 162  SFIGYTATWSPAS*RIFESEISNST*RQDLSPPLCNSLLTLI*AKNGFFASS 7
            S  GYT  +  A   + E ++S      +L   LC +   L    +    SS
Sbjct: 1429 SLTGYTLHYRTAHGNLDELQLSRHATSHELKGLLCGNTYQLYLTSHNKIGSS 1480


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,455
Number of Sequences: 438
Number of extensions: 901
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4401495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)