Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_P03
         (172 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   1.2  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    20   2.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    20   2.0  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    20   2.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   2.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    20   2.7  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           19   3.5  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    19   3.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    19   3.5  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    19   4.7  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    19   6.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    19   6.2  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    19   6.2  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    19   6.2  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    18   8.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    18   8.2  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 1.2
 Identities = 8/39 (20%), Positives = 15/39 (38%)
 Frame = -2

Query: 171 WLPPSRHSAQPARLTWLYTHYLPFRTLWMINDFSLTKTE 55
           W+P  +    P+   +++     F   WM    S  K +
Sbjct: 95  WVPGGKAEVPPSNPIYIHPESPNFGAHWMKESISFAKVK 133


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +1

Query: 88  PQCPKGKIMC 117
           P CP GK+ C
Sbjct: 107 PICPDGKLSC 116


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +1

Query: 88  PQCPKGKIMC 117
           P CP GK+ C
Sbjct: 114 PICPDGKLSC 123


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 142 ACSANLALYTLSSLSDIVDDK*FFTN 65
           ACS+ + ++ ++   D+  D   F N
Sbjct: 393 ACSSEVMMFRMARRYDVQTDSILFVN 418


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 161 HLVIALSLLG*LGFIHIIFPFGH 93
           H+VI ++L+  +G   I  PF H
Sbjct: 676 HIVIGMNLIIHVGTQLIYRPFSH 698


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 6/17 (35%), Positives = 8/17 (47%)
 Frame = -3

Query: 62  KPNRQVTNSPRWPHPPT 12
           +P    T  P W  PP+
Sbjct: 401 EPTISTTPRPEWARPPS 417


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 45  H*FTKMAAPANR 10
           H  T+ AAPANR
Sbjct: 339 HEVTRPAAPANR 350


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 8/39 (20%), Positives = 15/39 (38%)
 Frame = -2

Query: 171 WLPPSRHSAQPARLTWLYTHYLPFRTLWMINDFSLTKTE 55
           W P     AQ     +++       + WM  D S ++ +
Sbjct: 87  WSPAGHEEAQSPHRIYMHPESPSKGSHWMNQDISFSRVK 125


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 171 WLPPSRHSAQPARLTWLYTHYLPF 100
           W  P R +  P  L  + TH +PF
Sbjct: 440 WNIP-RENIDPIPLVVVLTHLIPF 462


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 19.0 bits (37), Expect = 4.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 105 EDNVYKAKLAEQAERYDEMVE 167
           E + Y+AKLA+  + Y + +E
Sbjct: 143 EHSDYRAKLAQIRQIYHQELE 163


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 5/10 (50%), Positives = 6/10 (60%)
 Frame = +1

Query: 88  PQCPKGKIMC 117
           P CP G + C
Sbjct: 115 PLCPDGSLAC 124


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -2

Query: 132 LTWLYTHYLPFRTLWMINDF 73
           L W + H +  + L  IN F
Sbjct: 394 LDWTFCHMVSHKWLNYINQF 413


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 96  TLWMINDFSLTKT 58
           TLW+ N  SLT T
Sbjct: 144 TLWLSNVNSLTLT 156


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 96  TLWMINDFSLTKT 58
           TLW+ N  SLT T
Sbjct: 70  TLWLSNVNSLTLT 82


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 70  TN*NRIARSLIHQDGRTRQPNLV 2
           +N   +  S   +DG   QPN+V
Sbjct: 505 SNYRNVDNSAKFKDGFQEQPNVV 527


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +1

Query: 79  IYHPQCPKGKIM 114
           +  P+CP G+ M
Sbjct: 93  LVQPRCPSGESM 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,399
Number of Sequences: 336
Number of extensions: 701
Number of successful extensions: 20
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 36
effective length of database: 110,489
effective search space used:  2209780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)