Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_P03
         (172 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   0.45 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               20   3.2  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    20   3.2  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    20   3.2  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    19   4.2  
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...    19   4.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    19   4.2  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           19   4.2  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    19   5.5  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    19   5.5  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    19   5.5  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       19   7.3  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    19   7.3  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    19   7.3  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    18   9.7  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 0.45
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 90  WMINDFSLTKTE 55
           W IND +L KTE
Sbjct: 253 WQINDIALLKTE 264


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -2

Query: 144 QPARLTWLYTHYLPFRTLWMIND 76
           QP  L  L  H++P    W++ +
Sbjct: 491 QPEPLIELIEHWMPLLPNWILEN 513


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 31  LGELVTWRFGFS 66
           LG L  W FGF+
Sbjct: 74  LGGLTYWAFGFA 85


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 66  LVKNHLSSTMS 98
           +V+NHL+ST S
Sbjct: 340 IVRNHLNSTCS 350


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 47  PGDSVLVSEKSFIIHNVRKG 106
           PGD+V  + K+  +  +R+G
Sbjct: 304 PGDNVGFNVKNISVKELRRG 323


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 47  PGDSVLVSEKSFIIHNVRKG 106
           PGD+V  + K+  +  +R+G
Sbjct: 15  PGDNVGFNVKNISVKELRRG 34


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 31  LGELVTWRFGFS**KIIYHPQCPKGKI 111
           +GEL   +FGF   +    P  P+ KI
Sbjct: 73  IGELSATKFGFPCLQYTQLPVNPRDKI 99


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 31  LGELVTWRFGFS**KIIYHPQCPKGKI 111
           +GEL   +FGF   +    P  P+ KI
Sbjct: 73  IGELSATKFGFPCLQYTQLPVNPRDKI 99


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 47  PGDSVLVSEKSFIIHNVRKG 106
           PGD+V  + K+  +  +R+G
Sbjct: 247 PGDNVGFNVKNVSVKELRRG 266


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/10 (60%), Positives = 6/10 (60%)
 Frame = -2

Query: 141 PARLTWLYTH 112
           P R  WLY H
Sbjct: 725 PRRKEWLYLH 734


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 47  PGDSVLVSEKSFIIHNVRKG 106
           PGD+V  + K+  +  +R+G
Sbjct: 304 PGDNVGFNVKNVSVKELRRG 323


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 6/16 (37%), Positives = 8/16 (50%)
 Frame = +3

Query: 12  GWRVRPSW*ISDLAIR 59
           GW +  SW   D+  R
Sbjct: 97  GWAITVSWKAGDVMCR 112


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 7   DSVGGCGHLGELVTWRFGF 63
           DSV  CG L  +V    GF
Sbjct: 197 DSVECCGALKNIVACGAGF 215


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = -1

Query: 142 ACSANLALYTLSSLSDIVDDK*FFTN 65
           ACS+ + +  ++   D+  D   F N
Sbjct: 413 ACSSEVMMLRMARKYDVQTDSIIFAN 438


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -3

Query: 50  QVTNSPRWPHPP 15
           ++TN+  +P+PP
Sbjct: 220 RITNNLFYPYPP 231


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,772
Number of Sequences: 438
Number of extensions: 845
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 36
effective length of database: 130,575
effective search space used:  2611500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)