Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_P01
         (134 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003317-1|AAO25077.1|  545|Drosophila melanogaster GH01086p pro...    27   3.6  
AY061006-1|AAL28554.1|  545|Drosophila melanogaster HL02140p pro...    27   3.6  
AF479079-1|AAL86452.1|  637|Drosophila melanogaster half pint pr...    27   3.6  
AF190745-1|AAF04132.1|  637|Drosophila melanogaster poly-U bindi...    27   3.6  
AE014296-262|AAG22222.2|  545|Drosophila melanogaster CG12085-PD...    27   3.6  
AE014296-261|AAF47502.1|  545|Drosophila melanogaster CG12085-PC...    27   3.6  
AE014296-260|AAG22221.1|  545|Drosophila melanogaster CG12085-PB...    27   3.6  
AE014296-259|AAF47501.1|  637|Drosophila melanogaster CG12085-PA...    27   3.6  

>BT003317-1|AAO25077.1|  545|Drosophila melanogaster GH01086p
           protein.
          Length = 545

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +2

Query: 68  RKLLDASP-DTLQQQESLSISGQ 133
           +KL+D     TLQQQE++SI GQ
Sbjct: 406 KKLMDEGDVQTLQQQENMSIKGQ 428


>AY061006-1|AAL28554.1|  545|Drosophila melanogaster HL02140p
           protein.
          Length = 545

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +2

Query: 68  RKLLDASP-DTLQQQESLSISGQ 133
           +KL+D     TLQQQE++SI GQ
Sbjct: 406 KKLMDEGDVQTLQQQENMSIKGQ 428


>AF479079-1|AAL86452.1|  637|Drosophila melanogaster half pint
           protein.
          Length = 637

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +2

Query: 68  RKLLDASP-DTLQQQESLSISGQ 133
           +KL+D     TLQQQE++SI GQ
Sbjct: 498 KKLMDEGDVQTLQQQENMSIKGQ 520


>AF190745-1|AAF04132.1|  637|Drosophila melanogaster poly-U binding
           splicing factor protein.
          Length = 637

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +2

Query: 68  RKLLDASP-DTLQQQESLSISGQ 133
           +KL+D     TLQQQE++SI GQ
Sbjct: 498 KKLMDEGDVQTLQQQENMSIKGQ 520


>AE014296-262|AAG22222.2|  545|Drosophila melanogaster CG12085-PD,
           isoform D protein.
          Length = 545

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +2

Query: 68  RKLLDASP-DTLQQQESLSISGQ 133
           +KL+D     TLQQQE++SI GQ
Sbjct: 406 KKLMDEGDVQTLQQQENMSIKGQ 428


>AE014296-261|AAF47502.1|  545|Drosophila melanogaster CG12085-PC,
           isoform C protein.
          Length = 545

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +2

Query: 68  RKLLDASP-DTLQQQESLSISGQ 133
           +KL+D     TLQQQE++SI GQ
Sbjct: 406 KKLMDEGDVQTLQQQENMSIKGQ 428


>AE014296-260|AAG22221.1|  545|Drosophila melanogaster CG12085-PB,
           isoform B protein.
          Length = 545

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +2

Query: 68  RKLLDASP-DTLQQQESLSISGQ 133
           +KL+D     TLQQQE++SI GQ
Sbjct: 406 KKLMDEGDVQTLQQQENMSIKGQ 428


>AE014296-259|AAF47501.1|  637|Drosophila melanogaster CG12085-PA,
           isoform A protein.
          Length = 637

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +2

Query: 68  RKLLDASP-DTLQQQESLSISGQ 133
           +KL+D     TLQQQE++SI GQ
Sbjct: 498 KKLMDEGDVQTLQQQENMSIKGQ 520


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,605,098
Number of Sequences: 53049
Number of extensions: 6451
Number of successful extensions: 38
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 24,988,368
effective HSP length: 25
effective length of database: 23,662,143
effective search space used: 449580717
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)