Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_O23
         (163 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              21   1.8  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              20   2.4  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    19   4.2  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    19   4.2  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 15  QLIAASGALADPRPHLSLLKL 77
           QLI    A++D   HL + K+
Sbjct: 99  QLITECSAISDTNVHLKITKI 119


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 12  EQLIAASGALADPRPHLSLLKL 77
           +QL++    +++  PHL   KL
Sbjct: 98  KQLVSDCSTISEENPHLKASKL 119


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 77  GLNRWTIACSAHVQWFYIYIHIY 145
           G  RW +A +  V W   Y  I+
Sbjct: 203 GSIRWELAGTLAVVWIMCYFCIW 225


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 77  GLNRWTIACSAHVQWFYIYIHIY 145
           G  RW +A +  V W   Y  I+
Sbjct: 256 GSIRWELAGTLAVVWIMCYFCIW 278


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,292
Number of Sequences: 438
Number of extensions: 555
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 33
effective length of database: 131,889
effective search space used:  2637780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)