Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_O22
(266 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0182 + 1345209-1347065 28 1.2
08_01_0207 - 1647168-1647251,1647583-1647726,1648176-1648287,164... 28 1.2
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310... 27 2.1
10_08_0558 + 18756797-18756887,18757189-18757262,18759881-187600... 27 2.7
03_05_1124 + 30559633-30559674,30559781-30559890,30559973-305600... 27 2.7
03_01_0575 + 4247431-4247489,4248475-4248547,4248792-4249229,425... 26 4.8
12_01_1041 - 10711362-10711428,10711571-10712262,10712622-107127... 25 6.3
09_04_0151 - 15154063-15154296,15155616-15155660,15155749-151558... 25 6.3
01_06_1268 - 35878520-35879353,35879920-35880332,35881109-358815... 25 6.3
09_04_0393 + 17255315-17256019,17256107-17257909 25 8.3
08_02_0804 - 21393042-21393155,21393250-21393363,21394184-213943... 25 8.3
05_03_0193 + 9543565-9543691,9544016-9544202,9544956-9545352 25 8.3
03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565... 25 8.3
03_02_0574 + 9575496-9575517,9575636-9576418,9576754-9577163,957... 25 8.3
03_02_0031 + 5134889-5135021,5135109-5135179,5135267-5135428,513... 25 8.3
01_07_0126 - 41222916-41222942,41223120-41223190,41223478-412235... 25 8.3
>12_01_0182 + 1345209-1347065
Length = 618
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -3
Query: 126 ILSKSPMKPTSVFL*TSLCVFSSSSNCL 43
+L SP+ PT+ FL SL + SSSS CL
Sbjct: 87 LLLSSPLPPTT-FLANSLLLASSSSRCL 113
>08_01_0207 -
1647168-1647251,1647583-1647726,1648176-1648287,
1648392-1648573,1648649-1648780,1648900-1649856,
1649949-1650734
Length = 798
Score = 27.9 bits (59), Expect = 1.2
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Frame = +2
Query: 2 HEVKKELEHLR---RMNKQ----LDDELKTQRDVYRKTEVGFMGDLDSIRKELNRACKNN 160
H++ EL+HLR R +K+ L EL+ R+ R +E+ DLDS + E++R +
Sbjct: 114 HDLFLELDHLREQLRESKERELALQSELRQCRENPRVSELE--KDLDSRKNEIDRLVRLK 171
Query: 161 QELEV 175
LEV
Sbjct: 172 TSLEV 176
>03_02_0834 -
11630288-11630500,11630531-11630623,11630844-11631050,
11631301-11633089,11633817-11634145
Length = 876
Score = 27.1 bits (57), Expect = 2.1
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +2
Query: 5 EVKKELEHLRRMNKQLDDEL---KTQRDVYRKTEVGFMGDLDSIRKELNR 145
+V ++ L NKQL+DEL K + D K+ V +L +E N+
Sbjct: 443 DVSNKITSLELQNKQLNDELQKVKKEHDTLLKSSVELNDNLTKTAEERNQ 492
>10_08_0558 + 18756797-18756887,18757189-18757262,18759881-18760069,
18760190-18760309,18760457-18760521,18760684-18760828,
18761304-18763337,18763904-18764025,18764127-18764309,
18764635-18764690,18765086-18765141
Length = 1044
Score = 26.6 bits (56), Expect = 2.7
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 14 KELEHLRRMNKQLDDELKTQRDVYRKTEVGFMGDLDSIRKEL---NRACKNN 160
KELE L+ N L++ELK Y + + F +++ R++L RA KN+
Sbjct: 956 KELEILKERNTALEEELKELHGRYSEISLKF-AEVEGERQQLVMTVRALKNS 1006
>03_05_1124 + 30559633-30559674,30559781-30559890,30559973-30560030,
30560455-30560718,30560803-30560940,30561264-30561315,
30561525-30561604,30561929-30561988,30562084-30562164,
30562299-30562376,30563548-30563676,30563896-30564039,
30564145-30564290,30564402-30564558,30564657-30564715,
30564800-30564959,30565054-30565203,30565309-30565445,
30565531-30565677,30565995-30566052,30566417-30566518,
30566590-30566627,30566846-30566972,30567053-30567223,
30567313-30567444,30567575-30567681,30567815-30567875,
30567970-30568147,30568245-30568450,30568781-30568879,
30569021-30569236,30569333-30569472,30569559-30569660,
30569747-30569861,30570129-30570194,30570323-30570480,
30570594-30570690,30570931-30571137,30571435-30571505,
30571648-30571747,30571836-30571892,30571969-30572025,
30572108-30572188,30572319-30572401,30572504-30572651
Length = 1722
Score = 26.6 bits (56), Expect = 2.7
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +2
Query: 17 ELEHLRRMNKQLDDEL---KTQRDVYRKTEVGFMGDLDSIRKE-LNRACKNNQELEVTNX 184
++E L R NK+L+DEL +T+ + K + + D + +E L + K NQ E+
Sbjct: 1217 KVELLTRQNKELEDELVTFRTKAEDLEKRLLEVQKESDELSREILEKDSKLNQLQEMIER 1276
Query: 185 XXXXXXXXXXXQLTLTQKAL 244
L Q++L
Sbjct: 1277 LETNLSSLESENQVLRQQSL 1296
>03_01_0575 +
4247431-4247489,4248475-4248547,4248792-4249229,
4252122-4253339
Length = 595
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 2 HEVKKELEHLRRMNKQLDDELKTQRDVYRKTE 97
H K +LEH+ R +K DD ++ R VY++ +
Sbjct: 378 HRAKYQLEHIVRTHKGADD--RSFRSVYQEED 407
>12_01_1041 -
10711362-10711428,10711571-10712262,10712622-10712777,
10712885-10713957,10714422-10714524,10714694-10714876,
10715007-10715099,10715379-10715564,10716530-10716793
Length = 938
Score = 25.4 bits (53), Expect = 6.3
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -2
Query: 145 PVQFFPDTIQISHEAH 98
PV +FP T +SH++H
Sbjct: 558 PVSYFPSTGDVSHKSH 573
>09_04_0151 -
15154063-15154296,15155616-15155660,15155749-15155820,
15155932-15156024,15156282-15156351,15156716-15156912,
15156946-15157215,15158620-15158757,15158841-15158930,
15159041-15159247,15159987-15160154,15160300-15160503,
15160584-15160670,15160748-15160861,15161689-15161835,
15161914-15162063,15162211-15162276,15162376-15162480,
15162625-15162798,15162930-15163154,15163534-15163590,
15163858-15164019,15164234-15164302,15164391-15164471,
15164823-15164925,15165011-15165156,15165285-15165359,
15165441-15165508,15165586-15165667,15165745-15165858,
15166358-15166476,15166692-15166781,15166862-15166988
Length = 1382
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 50 LDDELKTQRDVYRKTEVGFMGDLDSIRKELNRACKNNQELE 172
L + L Q++V + M + +SIRKEL+R +E E
Sbjct: 801 LSELLTLQKEVVYLSSSSLMKEKESIRKELDRTKTKLKETE 841
>01_06_1268 -
35878520-35879353,35879920-35880332,35881109-35881510,
35881598-35881619
Length = 556
Score = 25.4 bits (53), Expect = 6.3
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 5 EVKKELEHLRRMNKQLDDELKTQRDVYRKTEVGFMGDLDSIRKELNRACKNNQELEVT 178
E+ + + LR+ ++ ++ TQ + RKT G +RK L+R NN VT
Sbjct: 332 ELNQPRDELRKTVTEIKKDVHTQLEQTRKTNKNVHGIAKELRK-LHREGINNATNSVT 388
>09_04_0393 + 17255315-17256019,17256107-17257909
Length = 835
Score = 25.0 bits (52), Expect = 8.3
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 14 KELEHLRRMNKQLDDELKTQRDVYRKTEVGFMGDLDSIRKELNR 145
+ L+ L ++ KQ+DD R+ + K V G L ++ EL +
Sbjct: 708 RSLDRLDQLIKQIDDRRVALREAHEKANVACDGKL-AMENELRK 750
>08_02_0804 -
21393042-21393155,21393250-21393363,21394184-21394345,
21394668-21394796,21395932-21395967
Length = 184
Score = 25.0 bits (52), Expect = 8.3
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 32 RRMNKQLDDELKTQRDVYRKTEVGFMGDLDSIRKELNRACKNNQE 166
RR+ QLDD++ R + G D++S ++ R+ K Q+
Sbjct: 14 RRLEAQLDDQMSAYRKLISMKSDGSENDIES---DIERSLKQLQQ 55
>05_03_0193 + 9543565-9543691,9544016-9544202,9544956-9545352
Length = 236
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 236 FASTLAAFPEIPPPPLIHC 180
F L A P PPPP HC
Sbjct: 177 FNVLLIALPLSPPPPSYHC 195
>03_05_0754 +
27452203-27452242,27452360-27455611,27456480-27456533,
27456774-27456872,27456948-27457012,27457476-27457575,
27458326-27458408,27458494-27458569,27458920-27459698
Length = 1515
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 2 HEVKKELEHLRRMNKQLDDELKTQRD 79
H+ K+ +EHL + +++ELK D
Sbjct: 590 HKQKQAMEHLEELKLSMENELKGYMD 615
>03_02_0574 +
9575496-9575517,9575636-9576418,9576754-9577163,
9577246-9578079
Length = 682
Score = 25.0 bits (52), Expect = 8.3
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 2 HEVKKELEHLRRMNKQLDDELKTQRDVYRKTEVGFMGDLDSIRKELNRACKNNQELEVT 178
+++ + + LR+ ++ ++ TQ + RKT G +RK L+R NN VT
Sbjct: 457 NDLNQPRDELRKTVTEIKKDVHTQLEQARKTNKNVSGIAKELRK-LHREGINNATNSVT 514
>03_02_0031 +
5134889-5135021,5135109-5135179,5135267-5135428,
5135786-5135891,5136385-5136429,5136850-5136946,
5137027-5137210,5137304-5137483,5137567-5137770
Length = 393
Score = 25.0 bits (52), Expect = 8.3
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +2
Query: 5 EVKKELEHLRRMNKQLDDELKTQRDVYRKTEVGFMGDLDSIRKELNRACKNNQELE 172
E+ ++ + R + +L DE+ D +R+ + +LD IR+ELN+ K +L+
Sbjct: 16 ELIRKSQRNRSASVELVDEVIALDDQWRQRQF----ELDKIRQELNKTSKEIGKLK 67
>01_07_0126 -
41222916-41222942,41223120-41223190,41223478-41223560,
41223587-41223653,41223740-41223848,41224431-41224511,
41224671-41224940,41225035-41226510,41226832-41226908,
41227812-41227912,41229397-41229660,41230964-41231136
Length = 932
Score = 25.0 bits (52), Expect = 8.3
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 20 LEHLRRMNKQLDDELKTQRDVYRKTEVGFMGDLDSIRKELNRACK 154
LE R +D++ RD+ ++ E+GF S+ L+RACK
Sbjct: 743 LECCREARSFIDEKRYILRDIKKEKELGF-----SMPVSLSRACK 782
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,922,601
Number of Sequences: 37544
Number of extensions: 89508
Number of successful extensions: 345
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 14,793,348
effective HSP length: 67
effective length of database: 12,277,900
effective search space used: 257835900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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