Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_O22
(266 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 31 0.11
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 31 0.11
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 31 0.11
U23511-10|AAC46789.3| 260|Caenorhabditis elegans Hypothetical p... 29 0.34
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 27 2.4
AF036688-8|AAB88314.2| 482|Caenorhabditis elegans Hypothetical ... 27 2.4
U40799-1|AAA81479.1| 250|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z81526-6|CAB04263.1| 2144|Caenorhabditis elegans Hypothetical pr... 26 4.2
U41276-3|AAA82470.2| 517|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z83122-1|CAB05597.1| 293|Caenorhabditis elegans Hypothetical pr... 25 5.6
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 25 5.6
AF067622-2|AAK68367.1| 651|Caenorhabditis elegans Hypothetical ... 25 5.6
Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical p... 25 7.4
Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical p... 25 7.4
U13019-7|AAC24445.2| 689|Caenorhabditis elegans Hypothetical pr... 25 7.4
AF125457-1|AAD12831.1| 108|Caenorhabditis elegans Hypothetical ... 25 7.4
AF016440-6|AAN84798.1| 525|Caenorhabditis elegans Hypothetical ... 25 7.4
AF016440-5|AAB65904.2| 535|Caenorhabditis elegans Hypothetical ... 25 7.4
Z81070-11|CAB03006.3| 1086|Caenorhabditis elegans Hypothetical p... 25 9.7
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 25 9.7
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 25 9.7
U40029-6|AAA81126.1| 490|Caenorhabditis elegans Proteasome regu... 25 9.7
AF160248-1|AAD45518.1| 860|Caenorhabditis elegans ribonuclease ... 25 9.7
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 31.1 bits (67), Expect = 0.11
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 17 ELEHLRR---MNKQLDDELKTQRDVYRKTEVGFMGDLDSIRKELNRACKNNQELE 172
ELEH ++ + +Q E+K QRD Y+K + L IR +L K Q+LE
Sbjct: 747 ELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLE 801
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 31.1 bits (67), Expect = 0.11
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 17 ELEHLRR---MNKQLDDELKTQRDVYRKTEVGFMGDLDSIRKELNRACKNNQELE 172
ELEH ++ + +Q E+K QRD Y+K + L IR +L K Q+LE
Sbjct: 820 ELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLE 874
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 31.1 bits (67), Expect = 0.11
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 17 ELEHLRR---MNKQLDDELKTQRDVYRKTEVGFMGDLDSIRKELNRACKNNQELE 172
ELEH ++ + +Q E+K QRD Y+K + L IR +L K Q+LE
Sbjct: 820 ELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLE 874
>U23511-10|AAC46789.3| 260|Caenorhabditis elegans Hypothetical
protein C32D5.1 protein.
Length = 260
Score = 29.5 bits (63), Expect = 0.34
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 23 EHLRRMNKQLDDELKTQRDVYRKTEVGFMGDLDSIRKELNRACKNNQE 166
E R+M + + D YR++++ F L S R+EL CK N +
Sbjct: 14 EQKRKMGRPSKIPPFSHYDAYRRSDIDFFISLFSGREELYSPCKKNSD 61
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 26.6 bits (56), Expect = 2.4
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 14/66 (21%)
Frame = +2
Query: 8 VKKELEHLRRMNKQLDDELKTQRDV--------------YRKTEVGFMGDLDSIRKELNR 145
++KE+E LRR N+ + +++K + YRKT + ++DS++ E +
Sbjct: 204 IRKEIEELRRENEGIAEKMKESNNAVMDENKKLSDDNLEYRKTMLSQKSEIDSLKAENFK 263
Query: 146 ACKNNQ 163
NQ
Sbjct: 264 LVSENQ 269
>AF036688-8|AAB88314.2| 482|Caenorhabditis elegans Hypothetical
protein C24D10.1 protein.
Length = 482
Score = 26.6 bits (56), Expect = 2.4
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 5 EVKKELEHLRRMNKQLDDELKTQRDVYRKTEVGFMGDLDSIRKELNRACKNNQELEV 175
EVKK+ E L+ M +D + KT + + + LDS ++ + N +EV
Sbjct: 184 EVKKDFEKLQTMKIDIDKDCKTWKANSKLNQSEHFPALDSNLLKIEKGYVNISHVEV 240
>U40799-1|AAA81479.1| 250|Caenorhabditis elegans Hypothetical
protein F42C5.3 protein.
Length = 250
Score = 26.2 bits (55), Expect = 3.2
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 11 KKELEHLRRMNKQLDDELKTQ 73
KKEL+ L + NK+ +D+L+ Q
Sbjct: 38 KKELDELEKKNKKEEDDLREQ 58
>Z81526-6|CAB04263.1| 2144|Caenorhabditis elegans Hypothetical
protein F33H2.5 protein.
Length = 2144
Score = 25.8 bits (54), Expect = 4.2
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 20 LEHLRRMNKQLDDELKTQRDVYRKTEVGFMGDLDSIRKELNRACKNNQE 166
+EH+ R + L D L + Y K +L IRKEL + N +
Sbjct: 118 VEHMDREDLDLKDHLSGLKKTYIKLSFTSTVELIKIRKELMPLVRKNTD 166
>U41276-3|AAA82470.2| 517|Caenorhabditis elegans Hypothetical
protein C52B11.3 protein.
Length = 517
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/39 (25%), Positives = 23/39 (58%)
Frame = -3
Query: 126 ILSKSPMKPTSVFL*TSLCVFSSSSNCLFILRKCSNSFL 10
I+ + P+ ++F S+C+ + + NCL ++ C+ +L
Sbjct: 38 IVWRHPLLAIALF---SICLLTVAGNCLVVIAVCTKKYL 73
>Z83122-1|CAB05597.1| 293|Caenorhabditis elegans Hypothetical
protein R11A5.2 protein.
Length = 293
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 23 EHLRRMNKQLDDELKTQRDVYRKTE 97
E LRR N L ++ ++QR+ RK E
Sbjct: 85 EQLRRENSHLHEQCESQRERIRKLE 109
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical
protein K10D2.3 protein.
Length = 1425
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 63 SSSSNCLFILRKCSNSFLTSC 1
+ SS+ F KCS FLTSC
Sbjct: 235 AKSSSDRFPFSKCSEGFLTSC 255
>AF067622-2|AAK68367.1| 651|Caenorhabditis elegans Hypothetical
protein F33E11.3 protein.
Length = 651
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/37 (32%), Positives = 25/37 (67%)
Frame = +2
Query: 5 EVKKELEHLRRMNKQLDDELKTQRDVYRKTEVGFMGD 115
+V ELE + + N +L+DEL++ R Y ++++G + +
Sbjct: 587 QVLDELESVSKQNHRLEDELESVRRGY-ESQLGDLSE 622
>Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +2
Query: 44 KQLDDELKTQRDVYRKTEVGFMGDLDSIRKELNRACKNNQEL 169
K DD + +D Y + LDS++KE A + + L
Sbjct: 18 KHFDDAVDAAKDAYDSAKDKTSDTLDSVKKEGQEASDSTKSL 59
>Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +2
Query: 44 KQLDDELKTQRDVYRKTEVGFMGDLDSIRKELNRACKNNQEL 169
K DD + +D Y + LDS++KE A + + L
Sbjct: 18 KHFDDAVDAAKDAYDSAKDKTSDTLDSVKKEGQEASDSTKSL 59
>Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +2
Query: 44 KQLDDELKTQRDVYRKTEVGFMGDLDSIRKELNRACKNNQEL 169
K DD + +D Y + LDS++KE A + + L
Sbjct: 18 KHFDDAVDAAKDAYDSAKDKTSDTLDSVKKEGQEASDSTKSL 59
>Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +2
Query: 44 KQLDDELKTQRDVYRKTEVGFMGDLDSIRKELNRACKNNQEL 169
K DD + +D Y + LDS++KE A + + L
Sbjct: 18 KHFDDAVDAAKDAYDSAKDKTSDTLDSVKKEGQEASDSTKSL 59
>Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = -3
Query: 81 TSLCVFSSSSNCLFILRKCSNSFL 10
TS+C+ ++ +C+ L++CS + L
Sbjct: 127 TSICMAATYQSCILFLQECSPTHL 150
>Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = -3
Query: 81 TSLCVFSSSSNCLFILRKCSNSFL 10
TS+C+ ++ +C+ L++CS + L
Sbjct: 127 TSICMAATYQSCILFLQECSPTHL 150
>U13019-7|AAC24445.2| 689|Caenorhabditis elegans Hypothetical
protein T12A2.6 protein.
Length = 689
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
Frame = +2
Query: 5 EVKKELEHLRRM---NKQLDDELKTQRDVYRKT 94
+V+ L+ +R + N+ L++ LKT RD+YR +
Sbjct: 478 KVRSALQSIRDISSTNEDLNEILKTVRDIYRSS 510
>AF125457-1|AAD12831.1| 108|Caenorhabditis elegans Hypothetical
protein Y50F7A.2 protein.
Length = 108
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 120 SKSPMKPTSVFL*TSLCVFSSSSNCLFIL 34
+K P+ F +C ++SSSNC FIL
Sbjct: 7 TKVPVPTGEKFFTGIICRWASSSNCPFIL 35
>AF016440-6|AAN84798.1| 525|Caenorhabditis elegans Hypothetical
protein F29G9.2b protein.
Length = 525
Score = 25.0 bits (52), Expect = 7.4
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = +2
Query: 11 KKELEHLRRMNKQLDDE----LKTQRDVYRKTEVGFMGDLDSIR--KELNRACK-NNQEL 169
K + EH+R K LDDE ++ Q DV ++ IR KE NR +N+EL
Sbjct: 99 KLQYEHMRHRCKMLDDENQKLMRMQSDVVNDANRRVQMHVNEIRMLKEDNRKLAISNKEL 158
>AF016440-5|AAB65904.2| 535|Caenorhabditis elegans Hypothetical
protein F29G9.2a protein.
Length = 535
Score = 25.0 bits (52), Expect = 7.4
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = +2
Query: 11 KKELEHLRRMNKQLDDE----LKTQRDVYRKTEVGFMGDLDSIR--KELNRACK-NNQEL 169
K + EH+R K LDDE ++ Q DV ++ IR KE NR +N+EL
Sbjct: 109 KLQYEHMRHRCKMLDDENQKLMRMQSDVVNDANRRVQMHVNEIRMLKEDNRKLAISNKEL 168
>Z81070-11|CAB03006.3| 1086|Caenorhabditis elegans Hypothetical
protein F26E4.10 protein.
Length = 1086
Score = 24.6 bits (51), Expect = 9.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 5 EVKKELEHLRRMNKQLDDELKTQRDVYRKTEVGFMGDL 118
+ K ELEHL+R N+ + LK + V E G D+
Sbjct: 551 KTKNELEHLKRENRSARN-LKLREPVAGFIETGLKPDV 587
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 24.6 bits (51), Expect = 9.7
Identities = 17/77 (22%), Positives = 30/77 (38%)
Frame = +2
Query: 20 LEHLRRMNKQLDDELKTQRDVYRKTEVGFMGDLDSIRKELNRACKNNQELEVTNXXXXXX 199
L LR N+Q ++E ++ + R + D+I + NRA K + +E N
Sbjct: 470 LNSLREENRQYEEETRSLQTNIRTLQDEVYQHQDAITEWKNRAEKAEEYIEKENHRVQNA 529
Query: 200 XXXXXXQLTLTQKALAQ 250
+T + Q
Sbjct: 530 SSSHDADITRLENEKTQ 546
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 24.6 bits (51), Expect = 9.7
Identities = 17/77 (22%), Positives = 30/77 (38%)
Frame = +2
Query: 20 LEHLRRMNKQLDDELKTQRDVYRKTEVGFMGDLDSIRKELNRACKNNQELEVTNXXXXXX 199
L LR N+Q ++E ++ + R + D+I + NRA K + +E N
Sbjct: 470 LNSLREENRQYEEETRSLQTNIRTLQDEVYQHQDAITEWKNRAEKAEEYIEKENHRVQNA 529
Query: 200 XXXXXXQLTLTQKALAQ 250
+T + Q
Sbjct: 530 SSSHDADITRLENEKTQ 546
>U40029-6|AAA81126.1| 490|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 5 protein.
Length = 490
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 41 NKQLDDELKTQRDVYRKTEVGFMGDLDSIRK 133
+KQ+D+ L RD+ +K V + L++I K
Sbjct: 44 SKQVDEALLKARDIAQKDAVAAVESLNNIEK 74
>AF160248-1|AAD45518.1| 860|Caenorhabditis elegans ribonuclease
protein.
Length = 860
Score = 24.6 bits (51), Expect = 9.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 5 EVKKELEHLRRMNKQLDDELKTQRDVYRKTEVGFMGDL 118
+ K ELEHL+R N+ + LK + V E G D+
Sbjct: 325 KTKNELEHLKRENRSARN-LKLREPVAGFIETGLKPDV 361
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,123,452
Number of Sequences: 27780
Number of extensions: 78894
Number of successful extensions: 327
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 326
length of database: 12,740,198
effective HSP length: 67
effective length of database: 10,878,938
effective search space used: 228457698
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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