Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_O21
         (339 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    47   7e-08
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    21   4.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    20   7.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    20   7.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    20   7.1  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          20   7.1  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 46.8 bits (106), Expect = 7e-08
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
 Frame = +1

Query: 64  KSGKDKKITEEE-YEVEKIIDSKKIKGKLHYLIRWKGYSAGNDTWEPEITL-SCPDLI 231
           K+G    ++E + +EVE+I+  K+IKG   YLI+WK +    +TWEP   L +C D++
Sbjct: 231 KNGMKTLLSETDIWEVEQILAKKEIKGVPTYLIKWKNWDLKYNTWEPISNLINCSDIL 288


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 230 IKSGHDNVISGSHVSLPAEY 171
           I+SG  N+IS  H     EY
Sbjct: 66  IRSGQLNIISSDHDDSDEEY 85


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -1

Query: 207 DLRFPCVIACRISFPT 160
           D   PCV+ C++   T
Sbjct: 338 DFEHPCVMDCKVGVRT 353


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -1

Query: 207 DLRFPCVIACRISFPT 160
           D   PCV+ C++   T
Sbjct: 253 DFEHPCVMDCKVGVRT 268


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -1

Query: 207 DLRFPCVIACRISFPT 160
           D   PCV+ C++   T
Sbjct: 572 DFEHPCVMDCKVGVRT 587


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +1

Query: 148 HYLIRWKGYSA 180
           HY +RW  Y +
Sbjct: 10  HYCLRWNNYQS 20


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.309    0.131    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,662
Number of Sequences: 438
Number of extensions: 786
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7715466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.3 bits)