Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_O19
(295 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 107 2e-24
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 104 1e-23
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 104 1e-23
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 101 1e-22
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 101 1e-22
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 101 1e-22
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 100 4e-22
03_01_0034 + 318432-318825,318902-319851 99 5e-22
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 50 3e-07
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 42 9e-05
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 42 9e-05
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 40 5e-04
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 36 0.006
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 27 3.5
03_02_0319 - 7421357-7421757,7421768-7421843,7424695-7424796,742... 27 3.5
09_05_0007 - 20036981-20037159,20037690-20037943,20038103-200383... 26 4.6
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574... 26 4.6
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 26 6.1
01_01_0820 - 6395150-6395769,6395865-6396294 26 6.1
11_01_0127 + 1031690-1031952,1032850-1032857,1034679-1034927,103... 25 8.0
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 107 bits (256), Expect = 2e-24
Identities = 44/56 (78%), Positives = 52/56 (92%)
Frame = +2
Query: 119 KMREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEAS 286
KMREI+H+Q GQCGNQIG+KFWE++ +EHGIDPTG Y GTSDLQLER++VYYNEAS
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEAS 235
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 104 bits (249), Expect = 1e-23
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEAS 286
MREI+H+Q GQCGNQIGAKFWE++ +EHGIDPTG Y G SDLQLER++VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEAS 55
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 104 bits (249), Expect = 1e-23
Identities = 43/55 (78%), Positives = 51/55 (92%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEAS 286
MREI+H+Q GQCGNQIG+KFWE++ +EHGIDPTG Y GTSDLQLER++VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEAS 55
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 101 bits (242), Expect = 1e-22
Identities = 44/55 (80%), Positives = 49/55 (89%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEAS 286
MREI+H+Q GQCGNQIGAKFWE+I +EHGID TG Y G SDLQLERI+VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEAS 55
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 101 bits (242), Expect = 1e-22
Identities = 44/55 (80%), Positives = 49/55 (89%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEAS 286
MREI+H+Q GQCGNQIGAKFWE+I +EHGID TG Y G SDLQLERI+VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEAS 55
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 101 bits (241), Expect = 1e-22
Identities = 43/55 (78%), Positives = 49/55 (89%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEAS 286
MREI+H+Q GQCGNQIGAKFWE+I +EHG+D TG Y G SDLQLERI+VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEAS 55
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 99.5 bits (237), Expect = 4e-22
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEAS 286
MREI+H+Q GQCGNQIGAKFWE+I EHG+DPTG Y GTS QLERI+VY+NEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEAS 55
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 99.1 bits (236), Expect = 5e-22
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEAS 286
MREI+H+Q GQCGNQIGAKFWE++ EHGID TG Y G SDLQLER++VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEAS 55
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 50.0 bits (114), Expect = 3e-07
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = +2
Query: 125 REIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEA 283
REI+ +Q GQCGNQIG +FW+ + EHGI G+ + +R V++ +A
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQA 55
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 41.9 bits (94), Expect = 9e-05
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
MREI+ + GQ G Q+G WE+ EHGI+P G
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDG 34
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 41.9 bits (94), Expect = 9e-05
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGV 226
MREI+ + GQ G Q+G WE+ EHGI P G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGL 35
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 39.5 bits (88), Expect = 5e-04
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRG 235
MRE + + GQ G Q+G WE+ EHGI P G G
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPG 38
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 35.9 bits (79), Expect = 0.006
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
MRE + + GQ G Q+G WE+ EHGI G
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADG 34
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGI 211
MRE V +Q G N +G+ FW E G+
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGL 30
>03_02_0319 -
7421357-7421757,7421768-7421843,7424695-7424796,
7424911-7424982
Length = 216
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGI 211
MRE V +Q G N +G+ FW E G+
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGL 30
>09_05_0007 -
20036981-20037159,20037690-20037943,20038103-20038355,
20038447-20038640,20039122-20039252,20039378-20039488,
20039834-20039932
Length = 406
Score = 26.2 bits (55), Expect = 4.6
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -1
Query: 244 IACAPVNAGRVDAVLFEYYLPELCTNLVTALPGLEV 137
I AP+ AG +L YLP LC+ + LP L V
Sbjct: 250 IVVAPIAAG----LLLNRYLPRLCSAIQPFLPPLSV 281
>07_01_1133 -
10550799-10551137,10552195-10552254,10555693-10557401,
10557534-10557616,10577533-10578074
Length = 910
Score = 26.2 bits (55), Expect = 4.6
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 158 GNQIGAKFWEIIFEEHG--IDPTGVYRGTSDLQLERIS 265
G+Q +KFW+ + EE G ++ + Y +D Q ER++
Sbjct: 540 GSQFTSKFWQKLQEEMGTHLNFSTAYHPQTDGQTERVN 577
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 158 GNQIGAKFWEIIFEEHG--IDPTGVYRGTSDLQLERIS 265
G+Q +KFW+ + EE G ++ + Y +D Q ER++
Sbjct: 331 GSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVN 368
>01_01_0820 - 6395150-6395769,6395865-6396294
Length = 349
Score = 25.8 bits (54), Expect = 6.1
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = -2
Query: 225 TPVGSMPCSSNIISQNFAPIWLPHCPAWR 139
T G+ P + PIWLP C WR
Sbjct: 101 THTGAKPPCPKDAPRGVDPIWLPCCIDWR 129
>11_01_0127 +
1031690-1031952,1032850-1032857,1034679-1034927,
1034938-1035009,1036609-1036724,1037482-1037545,
1037742-1037773,1037804-1037850,1038627-1038660,
1039308-1039652,1040425-1040718,1040968-1041232,
1041359-1041480,1041754-1042059
Length = 738
Score = 25.4 bits (53), Expect = 8.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 281 PHYNKRRFSRVVNRLC 234
PH+N R FS+VV C
Sbjct: 262 PHFNARSFSKVVTNHC 277
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,792,531
Number of Sequences: 37544
Number of extensions: 107065
Number of successful extensions: 255
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 255
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 328462236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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