SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_O19
         (295 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M22335-1|AAA28993.1|  454|Drosophila melanogaster protein ( D.me...   109   8e-25
M20419-1|AAA28989.1|  447|Drosophila melanogaster protein ( D.me...   106   5e-24
BT015991-1|AAV36876.1|  454|Drosophila melanogaster RE53159p pro...   106   5e-24
BT003242-1|AAO24999.1|  447|Drosophila melanogaster LD43681p pro...   106   5e-24
AE013599-3851|AAF47193.2|  454|Drosophila melanogaster CG3401-PA...   106   5e-24
AE013599-2891|AAF57555.1|  447|Drosophila melanogaster CG9277-PB...   106   5e-24
AY118611-1|AAM49980.1|  457|Drosophila melanogaster LP10436p pro...   100   4e-22
AE014297-4213|AAF56770.2|  522|Drosophila melanogaster CG4869-PA...   100   4e-22
M20420-1|AAA28991.1|  446|Drosophila melanogaster protein ( D.me...    99   8e-22
AY118725-1|AAM50585.1|  446|Drosophila melanogaster GH02051p pro...    99   8e-22
AE014297-930|AAF54373.1|  446|Drosophila melanogaster CG9359-PA ...    99   8e-22
X16826-1|CAA34726.1|  435|Drosophila melanogaster 60C beta tubul...    69   1e-12
AE013599-2892|AAF57556.1|  456|Drosophila melanogaster CG9277-PA...    67   4e-12
AY089468-1|AAL90206.1|  462|Drosophila melanogaster AT27896p pro...    66   9e-12
AE014296-1121|AAF50659.1|  462|Drosophila melanogaster CG32396-P...    66   9e-12
M61765-1|AAA28597.1|  475|Drosophila melanogaster gamma-tubulin ...    57   4e-09
AY069633-1|AAL39778.1|  475|Drosophila melanogaster LD40196p pro...    57   4e-09
AF073994-1|AAC27620.1|  333|Drosophila melanogaster gamma-tubuli...    57   4e-09
AE014134-523|AAF51174.1|  475|Drosophila melanogaster CG3157-PA ...    57   4e-09
M76765-1|AAB52553.1|  457|Drosophila melanogaster gamma-tubulin ...    53   7e-08
AY070558-1|AAL48029.1|  457|Drosophila melanogaster LD32755p pro...    53   7e-08
AJ010552-1|CAA09233.1|  457|Drosophila melanogaster gamma-tubuli...    53   7e-08
AF091265-1|AAC64117.1|  457|Drosophila melanogaster gamma-tubuli...    53   7e-08
AF081253-1|AAC35844.1|  351|Drosophila melanogaster gamma-tubuli...    53   7e-08
AF081252-1|AAC35843.1|  457|Drosophila melanogaster gamma-tubuli...    53   7e-08
AE014134-3061|AAF53774.1|  457|Drosophila melanogaster CG17566-P...    53   7e-08
S60740-1|AAD13917.1|   25|Drosophila melanogaster beta 3 tubulin...    45   1e-05
M14646-1|AAA28988.1|  462|Drosophila melanogaster protein ( D.me...    45   1e-05
BT011034-1|AAR30194.1|  240|Drosophila melanogaster RE44641p pro...    45   1e-05
AE014296-1707|AAF50226.2|  462|Drosophila melanogaster CG8308-PA...    45   1e-05
X16825-1|CAA34725.1|   19|Drosophila melanogaster protein ( Dros...    44   2e-05
M14645-1|AAA28987.1|  450|Drosophila melanogaster protein ( D.me...    40   5e-04
M14643-1|AAA28985.1|  450|Drosophila melanogaster protein ( D.me...    40   5e-04
BT016118-1|AAV37003.1|  450|Drosophila melanogaster LD07757p pro...    40   5e-04
BT012506-1|AAS93777.1|  450|Drosophila melanogaster AT25469p pro...    40   5e-04
BT003630-1|AAO39634.1|  450|Drosophila melanogaster AT26363p pro...    40   5e-04
AY084208-1|AAL89946.1|  450|Drosophila melanogaster SD07763p pro...    40   5e-04
AE014297-627|AAN13341.1|  450|Drosophila melanogaster CG2512-PB,...    40   5e-04
AE014297-626|AAF54007.1|  450|Drosophila melanogaster CG2512-PA,...    40   5e-04
AE014297-554|AAF54067.1|  450|Drosophila melanogaster CG1913-PA ...    40   5e-04
M14644-1|AAA28986.1|  449|Drosophila melanogaster protein ( D.me...    39   0.001
AY113631-1|AAM29636.1|  449|Drosophila melanogaster RH71862p pro...    39   0.001
AE014297-1015|AAF54433.1|  449|Drosophila melanogaster CG9476-PA...    39   0.001
AY089253-1|AAL89991.1|  455|Drosophila melanogaster AT04270p pro...    31   0.19 
AE014297-2432|AAF55488.1|  455|Drosophila melanogaster CG7794-PA...    31   0.19 

>M22335-1|AAA28993.1|  454|Drosophila melanogaster protein (
           D.melanogaster beta-3 tubulin gene, exons 2, 3 and 4. ).
          Length = 454

 Score =  109 bits (261), Expect = 8e-25
 Identities = 49/58 (84%), Positives = 51/58 (87%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEASVAT 295
           MREIVHLQAGQCGNQIGAKFWEII EEHGID  G+Y G SDLQLER+SVYYNEAS  T
Sbjct: 1   MREIVHLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQLERVSVYYNEASAVT 58


>M20419-1|AAA28989.1|  447|Drosophila melanogaster protein (
           D.melanogaster beta-1 tubulin mRNA, complete cds. ).
          Length = 447

 Score =  106 bits (254), Expect = 5e-24
 Identities = 47/55 (85%), Positives = 50/55 (90%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEAS 286
           MREIVH+QAGQCGNQIGAKFWEII +EHGID TG Y G SDLQLERI+VYYNEAS
Sbjct: 1   MREIVHIQAGQCGNQIGAKFWEIISDEHGIDATGTYHGDSDLQLERINVYYNEAS 55


>BT015991-1|AAV36876.1|  454|Drosophila melanogaster RE53159p
           protein.
          Length = 454

 Score =  106 bits (254), Expect = 5e-24
 Identities = 48/58 (82%), Positives = 51/58 (87%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEASVAT 295
           MREIV+LQAGQCGNQIGAKFWEII EEHGID  G+Y G SDLQLER+SVYYNEAS  T
Sbjct: 1   MREIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQLERVSVYYNEASAVT 58


>BT003242-1|AAO24999.1|  447|Drosophila melanogaster LD43681p
           protein.
          Length = 447

 Score =  106 bits (254), Expect = 5e-24
 Identities = 47/55 (85%), Positives = 50/55 (90%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEAS 286
           MREIVH+QAGQCGNQIGAKFWEII +EHGID TG Y G SDLQLERI+VYYNEAS
Sbjct: 1   MREIVHIQAGQCGNQIGAKFWEIISDEHGIDATGAYHGDSDLQLERINVYYNEAS 55


>AE013599-3851|AAF47193.2|  454|Drosophila melanogaster CG3401-PA
           protein.
          Length = 454

 Score =  106 bits (254), Expect = 5e-24
 Identities = 48/58 (82%), Positives = 51/58 (87%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEASVAT 295
           MREIV+LQAGQCGNQIGAKFWEII EEHGID  G+Y G SDLQLER+SVYYNEAS  T
Sbjct: 1   MREIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQLERVSVYYNEASAVT 58


>AE013599-2891|AAF57555.1|  447|Drosophila melanogaster CG9277-PB,
           isoform B protein.
          Length = 447

 Score =  106 bits (254), Expect = 5e-24
 Identities = 47/55 (85%), Positives = 50/55 (90%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEAS 286
           MREIVH+QAGQCGNQIGAKFWEII +EHGID TG Y G SDLQLERI+VYYNEAS
Sbjct: 1   MREIVHIQAGQCGNQIGAKFWEIISDEHGIDATGAYHGDSDLQLERINVYYNEAS 55


>AY118611-1|AAM49980.1|  457|Drosophila melanogaster LP10436p
           protein.
          Length = 457

 Score =  100 bits (239), Expect = 4e-22
 Identities = 45/55 (81%), Positives = 47/55 (85%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEAS 286
           MREIVHLQAGQCGNQIG+KFWEII +EHGIDP G Y G S LQ ERI VYYNEAS
Sbjct: 1   MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYHGESALQHERIDVYYNEAS 55


>AE014297-4213|AAF56770.2|  522|Drosophila melanogaster CG4869-PA
           protein.
          Length = 522

 Score =  100 bits (239), Expect = 4e-22
 Identities = 45/55 (81%), Positives = 47/55 (85%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEAS 286
           MREIVHLQAGQCGNQIG+KFWEII +EHGIDP G Y G S LQ ERI VYYNEAS
Sbjct: 1   MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYHGESALQHERIDVYYNEAS 55


>M20420-1|AAA28991.1|  446|Drosophila melanogaster protein (
           D.melanogaster beta-2 tubulin mRNA, complete cds. ).
          Length = 446

 Score = 99.1 bits (236), Expect = 8e-22
 Identities = 44/57 (77%), Positives = 49/57 (85%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEASVA 292
           MREIVH+QAGQCGNQIG KFWE+I +EH ID TG Y G SDLQLERI+VYYNEA+ A
Sbjct: 1   MREIVHIQAGQCGNQIGGKFWEVISDEHCIDATGTYYGDSDLQLERINVYYNEATGA 57


>AY118725-1|AAM50585.1|  446|Drosophila melanogaster GH02051p
           protein.
          Length = 446

 Score = 99.1 bits (236), Expect = 8e-22
 Identities = 44/57 (77%), Positives = 49/57 (85%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEASVA 292
           MREIVH+QAGQCGNQIG KFWE+I +EH ID TG Y G SDLQLERI+VYYNEA+ A
Sbjct: 1   MREIVHIQAGQCGNQIGGKFWEVISDEHCIDATGTYYGDSDLQLERINVYYNEATGA 57


>AE014297-930|AAF54373.1|  446|Drosophila melanogaster CG9359-PA
           protein.
          Length = 446

 Score = 99.1 bits (236), Expect = 8e-22
 Identities = 44/57 (77%), Positives = 49/57 (85%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEASVA 292
           MREIVH+QAGQCGNQIG KFWE+I +EH ID TG Y G SDLQLERI+VYYNEA+ A
Sbjct: 1   MREIVHIQAGQCGNQIGGKFWEVISDEHCIDATGTYYGDSDLQLERINVYYNEATGA 57


>X16826-1|CAA34726.1|  435|Drosophila melanogaster 60C beta tubulin
           protein.
          Length = 435

 Score = 68.9 bits (161), Expect = 1e-12
 Identities = 30/39 (76%), Positives = 32/39 (82%)
 Frame = +2

Query: 179 FWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEASVAT 295
           FWEII EEHGID  G+Y G SDLQLER+SVYYNEAS  T
Sbjct: 1   FWEIISEEHGIDSNGIYVGDSDLQLERVSVYYNEASAVT 39


>AE013599-2892|AAF57556.1|  456|Drosophila melanogaster CG9277-PA,
           isoform A protein.
          Length = 456

 Score = 66.9 bits (156), Expect = 4e-12
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = +2

Query: 179 FWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEAS 286
           FWEII +EHGID TG Y G SDLQLERI+VYYNEAS
Sbjct: 29  FWEIISDEHGIDATGAYHGDSDLQLERINVYYNEAS 64


>AY089468-1|AAL90206.1|  462|Drosophila melanogaster AT27896p
           protein.
          Length = 462

 Score = 65.7 bits (153), Expect = 9e-12
 Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGID-PTGVYRGTSDLQLERISVYYN 277
           MREIV LQ G  GN IG  FW +I  EHG+D  +G + GTS LQLERI+V++N
Sbjct: 1   MREIVTLQIGGAGNAIGDSFWHVISHEHGVDYASGRFGGTSPLQLERINVFFN 53


>AE014296-1121|AAF50659.1|  462|Drosophila melanogaster CG32396-PA
           protein.
          Length = 462

 Score = 65.7 bits (153), Expect = 9e-12
 Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGID-PTGVYRGTSDLQLERISVYYN 277
           MREIV LQ G  GN IG  FW +I  EHG+D  +G + GTS LQLERI+V++N
Sbjct: 1   MREIVTLQIGGAGNAIGDSFWHVISHEHGVDYASGRFGGTSPLQLERINVFFN 53


>M61765-1|AAA28597.1|  475|Drosophila melanogaster gamma-tubulin
           protein.
          Length = 475

 Score = 56.8 bits (131), Expect = 4e-09
 Identities = 25/52 (48%), Positives = 36/52 (69%)
 Frame = +2

Query: 128 EIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEA 283
           EI+ LQ GQCGNQIG +FW+ +  EHGI P+GV    ++  L+R  V++ +A
Sbjct: 4   EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVLEDFANDGLDRKDVFFYQA 55


>AY069633-1|AAL39778.1|  475|Drosophila melanogaster LD40196p
           protein.
          Length = 475

 Score = 56.8 bits (131), Expect = 4e-09
 Identities = 25/52 (48%), Positives = 36/52 (69%)
 Frame = +2

Query: 128 EIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEA 283
           EI+ LQ GQCGNQIG +FW+ +  EHGI P+GV    ++  L+R  V++ +A
Sbjct: 4   EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVLEDFANDGLDRKDVFFYQA 55


>AF073994-1|AAC27620.1|  333|Drosophila melanogaster gamma-tubulin
           protein.
          Length = 333

 Score = 56.8 bits (131), Expect = 4e-09
 Identities = 25/52 (48%), Positives = 36/52 (69%)
 Frame = +2

Query: 128 EIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEA 283
           EI+ LQ GQCGNQIG +FW+ +  EHGI P+GV    ++  L+R  V++ +A
Sbjct: 4   EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVLEDFANDGLDRKDVFFYQA 55


>AE014134-523|AAF51174.1|  475|Drosophila melanogaster CG3157-PA
           protein.
          Length = 475

 Score = 56.8 bits (131), Expect = 4e-09
 Identities = 25/52 (48%), Positives = 36/52 (69%)
 Frame = +2

Query: 128 EIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEA 283
           EI+ LQ GQCGNQIG +FW+ +  EHGI P+GV    ++  L+R  V++ +A
Sbjct: 4   EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVLEDFANDGLDRKDVFFYQA 55


>M76765-1|AAB52553.1|  457|Drosophila melanogaster gamma-tubulin
           protein.
          Length = 457

 Score = 52.8 bits (121), Expect = 7e-08
 Identities = 24/52 (46%), Positives = 33/52 (63%)
 Frame = +2

Query: 128 EIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEA 283
           EI+ LQ GQCGNQIG +FW+ +  EHGI P GV    +    +R  V++ +A
Sbjct: 4   EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQA 55


>AY070558-1|AAL48029.1|  457|Drosophila melanogaster LD32755p
           protein.
          Length = 457

 Score = 52.8 bits (121), Expect = 7e-08
 Identities = 24/52 (46%), Positives = 33/52 (63%)
 Frame = +2

Query: 128 EIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEA 283
           EI+ LQ GQCGNQIG +FW+ +  EHGI P GV    +    +R  V++ +A
Sbjct: 4   EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQA 55


>AJ010552-1|CAA09233.1|  457|Drosophila melanogaster gamma-tubulin
           protein.
          Length = 457

 Score = 52.8 bits (121), Expect = 7e-08
 Identities = 24/52 (46%), Positives = 33/52 (63%)
 Frame = +2

Query: 128 EIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEA 283
           EI+ LQ GQCGNQIG +FW+ +  EHGI P GV    +    +R  V++ +A
Sbjct: 4   EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQA 55


>AF091265-1|AAC64117.1|  457|Drosophila melanogaster gamma-tubulin
           37CD protein.
          Length = 457

 Score = 52.8 bits (121), Expect = 7e-08
 Identities = 24/52 (46%), Positives = 33/52 (63%)
 Frame = +2

Query: 128 EIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEA 283
           EI+ LQ GQCGNQIG +FW+ +  EHGI P GV    +    +R  V++ +A
Sbjct: 4   EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQA 55


>AF081253-1|AAC35844.1|  351|Drosophila melanogaster gamma-tubulin
           protein.
          Length = 351

 Score = 52.8 bits (121), Expect = 7e-08
 Identities = 24/52 (46%), Positives = 33/52 (63%)
 Frame = +2

Query: 128 EIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEA 283
           EI+ LQ GQCGNQIG +FW+ +  EHGI P GV    +    +R  V++ +A
Sbjct: 4   EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQA 55


>AF081252-1|AAC35843.1|  457|Drosophila melanogaster gamma-tubulin
           protein.
          Length = 457

 Score = 52.8 bits (121), Expect = 7e-08
 Identities = 24/52 (46%), Positives = 33/52 (63%)
 Frame = +2

Query: 128 EIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEA 283
           EI+ LQ GQCGNQIG +FW+ +  EHGI P GV    +    +R  V++ +A
Sbjct: 4   EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQA 55


>AE014134-3061|AAF53774.1|  457|Drosophila melanogaster CG17566-PA
           protein.
          Length = 457

 Score = 52.8 bits (121), Expect = 7e-08
 Identities = 24/52 (46%), Positives = 33/52 (63%)
 Frame = +2

Query: 128 EIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEA 283
           EI+ LQ GQCGNQIG +FW+ +  EHGI P GV    +    +R  V++ +A
Sbjct: 4   EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQA 55


>S60740-1|AAD13917.1|   25|Drosophila melanogaster beta 3 tubulin
           protein.
          Length = 25

 Score = 45.2 bits (102), Expect = 1e-05
 Identities = 19/25 (76%), Positives = 20/25 (80%)
 Frame = +2

Query: 179 FWEIIFEEHGIDPTGVYRGTSDLQL 253
           FWEII EEHGID  G+Y G SDLQL
Sbjct: 1   FWEIISEEHGIDSNGIYVGDSDLQL 25


>M14646-1|AAA28988.1|  462|Drosophila melanogaster protein (
           D.melanogaster alpha-tubulin gene (alpha-4), complete
           cds. ).
          Length = 462

 Score = 45.2 bits (102), Expect = 1e-05
 Identities = 20/42 (47%), Positives = 26/42 (61%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDL 247
           MRE+V +Q GQCG QIG   WE+   EHGI+  G  +   +L
Sbjct: 1   MREVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEEL 42


>BT011034-1|AAR30194.1|  240|Drosophila melanogaster RE44641p
           protein.
          Length = 240

 Score = 45.2 bits (102), Expect = 1e-05
 Identities = 20/42 (47%), Positives = 26/42 (61%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDL 247
           MRE+V +Q GQCG QIG   WE+   EHGI+  G  +   +L
Sbjct: 1   MREVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEEL 42


>AE014296-1707|AAF50226.2|  462|Drosophila melanogaster CG8308-PA
           protein.
          Length = 462

 Score = 45.2 bits (102), Expect = 1e-05
 Identities = 20/42 (47%), Positives = 26/42 (61%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDL 247
           MRE+V +Q GQCG QIG   WE+   EHGI+  G  +   +L
Sbjct: 1   MREVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEEL 42


>X16825-1|CAA34725.1|   19|Drosophila melanogaster protein (
           Drosophila melanogasterDNA for 60C beta tubulin gene
           making beta 3 tubulin isoform.).
          Length = 19

 Score = 44.4 bits (100), Expect = 2e-05
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAK 178
           MREIVHLQAGQCGNQIGAK
Sbjct: 1   MREIVHLQAGQCGNQIGAK 19


>M14645-1|AAA28987.1|  450|Drosophila melanogaster protein (
           D.melanogaster alpha-tubulin gene (alpha-3), complete
           cds. ).
          Length = 450

 Score = 39.9 bits (89), Expect = 5e-04
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
           MRE + +  GQ G QIG   WE+   EHGI P G
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG 34


>M14643-1|AAA28985.1|  450|Drosophila melanogaster protein (
           D.melanogaster alpha-tubulin gene (alpha-1), complete
           cds. ).
          Length = 450

 Score = 39.9 bits (89), Expect = 5e-04
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
           MRE + +  GQ G QIG   WE+   EHGI P G
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG 34


>BT016118-1|AAV37003.1|  450|Drosophila melanogaster LD07757p
           protein.
          Length = 450

 Score = 39.9 bits (89), Expect = 5e-04
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
           MRE + +  GQ G QIG   WE+   EHGI P G
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG 34


>BT012506-1|AAS93777.1|  450|Drosophila melanogaster AT25469p
           protein.
          Length = 450

 Score = 39.9 bits (89), Expect = 5e-04
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
           MRE + +  GQ G QIG   WE+   EHGI P G
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG 34


>BT003630-1|AAO39634.1|  450|Drosophila melanogaster AT26363p
           protein.
          Length = 450

 Score = 39.9 bits (89), Expect = 5e-04
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
           MRE + +  GQ G QIG   WE+   EHGI P G
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG 34


>AY084208-1|AAL89946.1|  450|Drosophila melanogaster SD07763p
           protein.
          Length = 450

 Score = 39.9 bits (89), Expect = 5e-04
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
           MRE + +  GQ G QIG   WE+   EHGI P G
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG 34


>AE014297-627|AAN13341.1|  450|Drosophila melanogaster CG2512-PB,
           isoform B protein.
          Length = 450

 Score = 39.9 bits (89), Expect = 5e-04
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
           MRE + +  GQ G QIG   WE+   EHGI P G
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG 34


>AE014297-626|AAF54007.1|  450|Drosophila melanogaster CG2512-PA,
           isoform A protein.
          Length = 450

 Score = 39.9 bits (89), Expect = 5e-04
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
           MRE + +  GQ G QIG   WE+   EHGI P G
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG 34


>AE014297-554|AAF54067.1|  450|Drosophila melanogaster CG1913-PA
           protein.
          Length = 450

 Score = 39.9 bits (89), Expect = 5e-04
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
           MRE + +  GQ G QIG   WE+   EHGI P G
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG 34


>M14644-1|AAA28986.1|  449|Drosophila melanogaster protein (
           D.melanogaster alpha-tubulin gene (alpha-2), complete
           cds. ).
          Length = 449

 Score = 39.1 bits (87), Expect = 0.001
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
           MRE + +  GQ G QIG   WE+   EHGI P G
Sbjct: 1   MRECISVHIGQAGVQIGNACWELYCLEHGIQPDG 34


>AY113631-1|AAM29636.1|  449|Drosophila melanogaster RH71862p
           protein.
          Length = 449

 Score = 39.1 bits (87), Expect = 0.001
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
           MRE + +  GQ G QIG   WE+   EHGI P G
Sbjct: 1   MRECISVHIGQAGVQIGNACWELYCLEHGIQPDG 34


>AE014297-1015|AAF54433.1|  449|Drosophila melanogaster CG9476-PA
           protein.
          Length = 449

 Score = 39.1 bits (87), Expect = 0.001
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = +2

Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
           MRE + +  GQ G QIG   WE+   EHGI P G
Sbjct: 1   MRECISVHIGQAGVQIGNACWELYCLEHGIQPDG 34


>AY089253-1|AAL89991.1|  455|Drosophila melanogaster AT04270p
           protein.
          Length = 455

 Score = 31.5 bits (68), Expect = 0.19
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 128 EIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
           EI+ +  GQ G QI    WE+   EHGI   G
Sbjct: 6   EIIQIHIGQAGVQIANACWELFCLEHGILANG 37


>AE014297-2432|AAF55488.1|  455|Drosophila melanogaster CG7794-PA
           protein.
          Length = 455

 Score = 31.5 bits (68), Expect = 0.19
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 128 EIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
           EI+ +  GQ G QI    WE+   EHGI   G
Sbjct: 6   EIIQIHIGQAGVQIANACWELFCLEHGILANG 37


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,216,261
Number of Sequences: 53049
Number of extensions: 178111
Number of successful extensions: 346
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 344
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 506778984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -