Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_O19
(295 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 109 4e-25
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 103 2e-23
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 102 4e-23
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 102 4e-23
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 100 2e-22
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 99 5e-22
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 80 3e-16
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 80 3e-16
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 45 1e-05
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 44 2e-05
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 44 2e-05
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 44 3e-05
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 44 3e-05
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 42 8e-05
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 42 8e-05
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 42 1e-04
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 42 1e-04
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 41 1e-04
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 41 1e-04
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 41 1e-04
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 40 2e-04
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 40 2e-04
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 40 3e-04
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 39 5e-04
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 37 0.002
Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical pr... 25 7.1
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 109 bits (261), Expect = 4e-25
Identities = 47/55 (85%), Positives = 51/55 (92%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEAS 286
MREIVH+QAGQCGNQIGAKFWE+I +EHGIDPTG Y G SDLQLERI+VYYNEAS
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEAS 55
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 103 bits (247), Expect = 2e-23
Identities = 44/55 (80%), Positives = 50/55 (90%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEAS 286
MREIVH+QAGQCGNQIGAKFWE+I +EHGI P G Y+G SDLQLERI+VYYNEA+
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEAN 55
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 102 bits (245), Expect = 4e-23
Identities = 44/54 (81%), Positives = 50/54 (92%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEA 283
MREIVH+QAGQCGNQIG+KFWE+I +EHGIDP+G Y G SDLQLERI+VYYNEA
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEA 54
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 102 bits (245), Expect = 4e-23
Identities = 44/54 (81%), Positives = 50/54 (92%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEA 283
MREIVH+QAGQCGNQIG+KFWE+I +EHGIDP+G Y G SDLQLERI+VYYNEA
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEA 54
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 100 bits (239), Expect = 2e-22
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEAS 286
MREIVH+QAGQCGNQIG+KFWE+I +EHGI P G ++G SDLQLERI VYYNEA+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEAN 55
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 99.1 bits (236), Expect = 5e-22
Identities = 41/55 (74%), Positives = 49/55 (89%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNEAS 286
MREIVH+QAGQCGNQIG+KFWE+I +EHGI P G ++G +DLQLERI VYYNEA+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEAN 55
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 79.8 bits (188), Expect = 3e-16
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNE 280
M+EI+++Q GQCGNQIGAKFWE I EEHG+ G Y+G + QLERI+ YY E
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKE 53
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 79.8 bits (188), Expect = 3e-16
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNE 280
M+EI+++Q GQCGNQIGAKFWE I EEHG+ G Y+G + QLERI+ YY E
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKE 53
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 44.8 bits (101), Expect = 1e-05
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 125 REIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG--VYRGTSDLQLERISVYYNEAS 286
RE++ + GQ G QIG WE+ EHGI P G V T D + E I+ ++ E +
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETA 63
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 44.0 bits (99), Expect = 2e-05
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNE 280
MRE++ + GQ G QIG WE+ EHGI P G S + E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSD 53
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 44.0 bits (99), Expect = 2e-05
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNE 280
MRE++ + GQ G QIG WE+ EHGI P G S + E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSD 53
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 43.6 bits (98), Expect = 3e-05
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNE 280
MRE++ + GQ G QIG WE+ EHGI P G E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSD 53
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 43.6 bits (98), Expect = 3e-05
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYYNE 280
MRE++ + GQ G QIG WE+ EHGI P G E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSD 53
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 41.9 bits (94), Expect = 8e-05
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGV 226
MREIV + GQ G QIG WE+ EHGI P G+
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGL 35
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 41.9 bits (94), Expect = 8e-05
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 116 NKMREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLE 256
N+ RE++ + GQ G Q+G WE+ EHGI P G+ L ++
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVD 50
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 41.5 bits (93), Expect = 1e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
MRE++ + GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 41.5 bits (93), Expect = 1e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
MRE++ + GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 41.1 bits (92), Expect = 1e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
MRE++ + GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDG 34
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 41.1 bits (92), Expect = 1e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
MRE++ + GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDG 34
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 41.1 bits (92), Expect = 1e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
MRE++ + GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDG 34
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 40.3 bits (90), Expect = 2e-04
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 131 IVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYY 274
++ + GQCGNQ+ FW+ + +EHGI+ G D+ ++ ++Y
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY 54
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 40.3 bits (90), Expect = 2e-04
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 131 IVHLQAGQCGNQIGAKFWEIIFEEHGIDPTGVYRGTSDLQLERISVYY 274
++ + GQCGNQ+ FW+ + +EHGI+ G D+ ++ ++Y
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY 54
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 39.9 bits (89), Expect = 3e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
MRE++ + GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG 34
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 39.1 bits (87), Expect = 5e-04
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 125 REIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
RE++ + GQ G QIG WE+ EHGI P G
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDG 33
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 37.1 bits (82), Expect = 0.002
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 125 REIVHLQAGQCGNQIGAKFWEIIFEEHGIDPTG 223
RE V + GQ G QIG WE+ EHG+D G
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAG 38
>Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical
protein H03G16.2 protein.
Length = 377
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 146 AGQCGNQIGAKFWEIIFEEHGIDPTGVYR 232
+G C ++G K WE+ E G PTG+ +
Sbjct: 233 SGDCLKKMGKK-WEVTSEAVGPRPTGILK 260
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,610,810
Number of Sequences: 27780
Number of extensions: 90776
Number of successful extensions: 218
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 291481146
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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