Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_O16
(436 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D14530-1|BAA03400.1| 143|Homo sapiens yeast ribosomal protein S... 214 1e-55
CR456996-1|CAG33277.1| 143|Homo sapiens RPS23 protein. 214 1e-55
BC070221-1|AAH70221.1| 143|Homo sapiens ribosomal protein S23 p... 214 1e-55
AB007158-1|BAA25822.1| 59|Homo sapiens ribosomal protein S23 p... 107 2e-23
Y11681-2|CAA72377.1| 138|Homo sapiens mitochondrial ribosomal p... 54 2e-07
CR407609-1|CAG28537.1| 138|Homo sapiens MRPS12 protein. 54 2e-07
BC007499-1|AAH07499.1| 138|Homo sapiens mitochondrial ribosomal... 54 2e-07
BC006424-1|AAH06424.1| 138|Homo sapiens mitochondrial ribosomal... 54 2e-07
BC001617-1|AAH01617.1| 138|Homo sapiens mitochondrial ribosomal... 54 2e-07
AF058761-1|AAC64704.1| 138|Homo sapiens ribosomal protein S12 p... 54 2e-07
Y18064-1|CAA77022.1| 890|Homo sapiens wolframin protein. 30 4.0
BC030130-1|AAH30130.1| 890|Homo sapiens WFS1 protein protein. 30 4.0
AF084481-1|AAC64943.1| 890|Homo sapiens transmembrane protein p... 30 4.0
>D14530-1|BAA03400.1| 143|Homo sapiens yeast ribosomal protein S28
homologue protein.
Length = 143
Score = 214 bits (523), Expect = 1e-55
Identities = 102/108 (94%), Positives = 104/108 (96%)
Frame = +2
Query: 113 KKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 292
KKAH+GT KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK+TAFVP
Sbjct: 28 KKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPN 87
Query: 293 DGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK 436
DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK
Sbjct: 88 DGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK 135
Score = 45.2 bits (102), Expect = 1e-04
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +3
Query: 33 MGKPRGIRTARKHVNHRREQRWADKESKK 119
MGK RG+RTARK +HRR+Q+W DK+ KK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKK 29
>CR456996-1|CAG33277.1| 143|Homo sapiens RPS23 protein.
Length = 143
Score = 214 bits (523), Expect = 1e-55
Identities = 102/108 (94%), Positives = 104/108 (96%)
Frame = +2
Query: 113 KKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 292
KKAH+GT KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK+TAFVP
Sbjct: 28 KKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPN 87
Query: 293 DGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK 436
DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK
Sbjct: 88 DGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK 135
Score = 45.2 bits (102), Expect = 1e-04
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +3
Query: 33 MGKPRGIRTARKHVNHRREQRWADKESKK 119
MGK RG+RTARK +HRR+Q+W DK+ KK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKK 29
>BC070221-1|AAH70221.1| 143|Homo sapiens ribosomal protein S23
protein.
Length = 143
Score = 214 bits (523), Expect = 1e-55
Identities = 102/108 (94%), Positives = 104/108 (96%)
Frame = +2
Query: 113 KKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 292
KKAH+GT KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK+TAFVP
Sbjct: 28 KKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPN 87
Query: 293 DGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK 436
DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK
Sbjct: 88 DGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK 135
Score = 45.2 bits (102), Expect = 1e-04
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +3
Query: 33 MGKPRGIRTARKHVNHRREQRWADKESKK 119
MGK RG+RTARK +HRR+Q+W DK+ KK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKK 29
>AB007158-1|BAA25822.1| 59|Homo sapiens ribosomal protein S23
protein.
Length = 59
Score = 107 bits (256), Expect = 2e-23
Identities = 50/52 (96%), Positives = 50/52 (96%)
Frame = +2
Query: 281 FVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK 436
FVP DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK
Sbjct: 1 FVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK 52
>Y11681-2|CAA72377.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 precursor protein.
Length = 138
Score = 54.0 bits (124), Expect = 2e-07
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +2
Query: 140 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 319
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 320 NDEVLVAGFGRKGHAVGDIPGVRFKVVK 403
+ VLV G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>CR407609-1|CAG28537.1| 138|Homo sapiens MRPS12 protein.
Length = 138
Score = 54.0 bits (124), Expect = 2e-07
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +2
Query: 140 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 319
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 320 NDEVLVAGFGRKGHAVGDIPGVRFKVVK 403
+ VLV G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>BC007499-1|AAH07499.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 54.0 bits (124), Expect = 2e-07
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +2
Query: 140 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 319
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 320 NDEVLVAGFGRKGHAVGDIPGVRFKVVK 403
+ VLV G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>BC006424-1|AAH06424.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 54.0 bits (124), Expect = 2e-07
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +2
Query: 140 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 319
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 320 NDEVLVAGFGRKGHAVGDIPGVRFKVVK 403
+ VLV G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>BC001617-1|AAH01617.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 54.0 bits (124), Expect = 2e-07
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +2
Query: 140 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 319
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 320 NDEVLVAGFGRKGHAVGDIPGVRFKVVK 403
+ VLV G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>AF058761-1|AAC64704.1| 138|Homo sapiens ribosomal protein S12
protein.
Length = 138
Score = 54.0 bits (124), Expect = 2e-07
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +2
Query: 140 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 319
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 320 NDEVLVAGFGRKGHAVGDIPGVRFKVVK 403
+ VLV G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>Y18064-1|CAA77022.1| 890|Homo sapiens wolframin protein.
Length = 890
Score = 29.9 bits (64), Expect = 4.0
Identities = 36/127 (28%), Positives = 52/127 (40%)
Frame = +2
Query: 11 RSCSRYRNG*TSGYSHGAQARESSSRAAMGRQGIKKAHMGTRWKANPFGGASHAKGIVLE 190
R C R G TS + + R+ SS + R ++KA + WK NP A +LE
Sbjct: 146 RRCLADRRGITS--ENEREVRQLSSETDLER-AVRKAALVMYWKLNPKKKKQVAVAELLE 202
Query: 191 KVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVG 370
VG + A V L K + + V + N+I +D V + K +A G
Sbjct: 203 NVGQVNEHDGGAQPGPVPKSLQKQRRMLERLVSSES-KNYIALDDFVEIT----KKYAKG 257
Query: 371 DIPGVRF 391
IP F
Sbjct: 258 VIPSSLF 264
>BC030130-1|AAH30130.1| 890|Homo sapiens WFS1 protein protein.
Length = 890
Score = 29.9 bits (64), Expect = 4.0
Identities = 36/127 (28%), Positives = 52/127 (40%)
Frame = +2
Query: 11 RSCSRYRNG*TSGYSHGAQARESSSRAAMGRQGIKKAHMGTRWKANPFGGASHAKGIVLE 190
R C R G TS + + R+ SS + R ++KA + WK NP A +LE
Sbjct: 146 RRCLADRRGITS--ENEREVRQLSSETDLER-AVRKAALVMYWKLNPKKKKQVAVAELLE 202
Query: 191 KVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVG 370
VG + A V L K + + V + N+I +D V + K +A G
Sbjct: 203 NVGQVNEHDGGAQPGPVPKSLQKQRRMLERLVSSES-KNYIALDDFVEIT----KKYAKG 257
Query: 371 DIPGVRF 391
IP F
Sbjct: 258 VIPSSLF 264
>AF084481-1|AAC64943.1| 890|Homo sapiens transmembrane protein
protein.
Length = 890
Score = 29.9 bits (64), Expect = 4.0
Identities = 36/127 (28%), Positives = 52/127 (40%)
Frame = +2
Query: 11 RSCSRYRNG*TSGYSHGAQARESSSRAAMGRQGIKKAHMGTRWKANPFGGASHAKGIVLE 190
R C R G TS + + R+ SS + R ++KA + WK NP A +LE
Sbjct: 146 RRCLADRRGITS--ENEREVRQLSSETDLER-AVRKAALVMYWKLNPKKKKQVAVAELLE 202
Query: 191 KVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVG 370
VG + A V L K + + V + N+I +D V + K +A G
Sbjct: 203 NVGQVNEHDGGAQPGPVPKSLQKQRRMLERLVSSES-KNYIALDDFVEIT----KKYAKG 257
Query: 371 DIPGVRF 391
IP F
Sbjct: 258 VIPSSLF 264
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,378,839
Number of Sequences: 237096
Number of extensions: 1636685
Number of successful extensions: 3433
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3421
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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