Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_O13
(363 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 31 0.25
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 31 0.25
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 31 0.25
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 31 0.25
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 30 0.57
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 30 0.57
AF016428-1|AAO26001.1| 330|Caenorhabditis elegans Serpentine re... 28 2.3
Z68319-2|CAA92700.2| 446|Caenorhabditis elegans Hypothetical pr... 27 4.0
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 27 4.0
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 27 4.0
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 27 4.0
AL021504-1|CAA16428.3| 325|Caenorhabditis elegans Hypothetical ... 27 4.0
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 27 4.0
AF016428-2|AAO26002.1| 316|Caenorhabditis elegans Serpentine re... 27 4.0
Z70783-10|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical p... 27 5.3
U64840-4|AAB04962.1| 316|Caenorhabditis elegans Serpentine rece... 27 5.3
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 26 7.0
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical
protein K08C7.3b protein.
Length = 3672
Score = 31.1 bits (67), Expect = 0.25
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +2
Query: 137 PQNGALADKLIGSCVWGAVNYTSDCNAECKRRGYRGGHCGSFANVNCWCE 286
P NG + C G NY EC G +G C S N C+C+
Sbjct: 630 PCNGNFTGRTCDKCAAGFYNYPDCRGCECLLSGAKGQTCDS--NGQCYCK 677
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical
protein K08C7.3a protein.
Length = 3704
Score = 31.1 bits (67), Expect = 0.25
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +2
Query: 137 PQNGALADKLIGSCVWGAVNYTSDCNAECKRRGYRGGHCGSFANVNCWCE 286
P NG + C G NY EC G +G C S N C+C+
Sbjct: 630 PCNGNFTGRTCDKCAAGFYNYPDCRGCECLLSGAKGQTCDS--NGQCYCK 677
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 31.1 bits (67), Expect = 0.25
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +2
Query: 137 PQNGALADKLIGSCVWGAVNYTSDCNAECKRRGYRGGHCGSFANVNCWCE 286
P NG + C G NY EC G +G C S N C+C+
Sbjct: 630 PCNGNFTGRTCDKCAAGFYNYPDCRGCECLLSGAKGQTCDS--NGQCYCK 677
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 31.1 bits (67), Expect = 0.25
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +2
Query: 137 PQNGALADKLIGSCVWGAVNYTSDCNAECKRRGYRGGHCGSFANVNCWCE 286
P NG + C G NY EC G +G C S N C+C+
Sbjct: 630 PCNGNFTGRTCDKCAAGFYNYPDCRGCECLLSGAKGQTCDS--NGQCYCK 677
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.9 bits (64), Expect = 0.57
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 140 QNGALADKLIGSCVWGAVNYTSDCNAECKRRGYRGGHC 253
+NGAL D + G C CN C +GY G HC
Sbjct: 1217 ENGALCDPISGHCSCQPGWRGKKCNRPC-LKGYFGRHC 1253
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.9 bits (64), Expect = 0.57
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 140 QNGALADKLIGSCVWGAVNYTSDCNAECKRRGYRGGHC 253
+NGAL D + G C CN C +GY G HC
Sbjct: 1217 ENGALCDPISGHCSCQPGWRGKKCNRPC-LKGYFGRHC 1253
>AF016428-1|AAO26001.1| 330|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 66 protein.
Length = 330
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 50 QVFTIIKMVKNYSSLLLFVCITFLVIVS 133
Q+ TII++V S +L +C FL+ +S
Sbjct: 19 QILTIIELVYGIPSFMLLICFQFLLGIS 46
>Z68319-2|CAA92700.2| 446|Caenorhabditis elegans Hypothetical
protein T23G7.2a protein.
Length = 446
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +2
Query: 65 IKMVKNYSSLLLFVCITFLVIVSSPQNGALADKL 166
I +++N S++L VC+ + +SSP++G L K+
Sbjct: 306 INVLENESTMLKGVCLAGVNDISSPKSGILNTKM 339
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Frame = +2
Query: 140 QNGALADKLIGSCVWGAVNYTSDCNAECKRRGYRGG---HCGSFANVNC 277
QNGA D G C+ + + + C EC + G C N NC
Sbjct: 252 QNGATCDNTNGKCICKSGYHGALCENECSVGFFGSGCTQKCDCLNNQNC 300
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Frame = +2
Query: 140 QNGALADKLIGSCVWGAVNYTSDCNAECKRRGYRGG---HCGSFANVNC 277
QNGA D G C+ + + + C EC + G C N NC
Sbjct: 252 QNGATCDNTNGKCICKSGYHGALCENECSVGFFGSGCTQKCDCLNNQNC 300
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Frame = +2
Query: 140 QNGALADKLIGSCVWGAVNYTSDCNAECKRRGYRGG---HCGSFANVNC 277
QNGA D G C+ + + + C EC + G C N NC
Sbjct: 252 QNGATCDNTNGKCICKSGYHGALCENECSVGFFGSGCTQKCDCLNNQNC 300
>AL021504-1|CAA16428.3| 325|Caenorhabditis elegans Hypothetical
protein Y61B8B.1 protein.
Length = 325
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 88 FIIAVCLHHIFGDRFISAKWRSSGQAYRQLRMGCC*LH 201
F+ +C +FG F+ A +GQ +L CC H
Sbjct: 248 FVAGLCALPLFGVAFVLAFQMENGQLIGKLMFVCCTCH 285
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Frame = +2
Query: 140 QNGALADKLIGSCVWGAVNYTSDCNAECKRRGYRGG---HCGSFANVNC 277
QNGA D G C+ + + + C EC + G C N NC
Sbjct: 252 QNGATCDNTNGKCICKSGYHGALCENECSVGFFGSGCTQKCDCLNNQNC 300
>AF016428-2|AAO26002.1| 316|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 65 protein.
Length = 316
Score = 27.1 bits (57), Expect = 4.0
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +2
Query: 35 FDVKDQVFTIIKMVKNYSSLLLFVCITFLV 124
FD+ D + I+++ SL++ +C FL+
Sbjct: 14 FDLSDTIVNIVELFCGIPSLVMMICFLFLM 43
>Z70783-10|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK856.13 protein.
Length = 1037
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 113 TFLVIVSSPQNGALADKLIGSCVWGAVNY 199
TF + VS PQNG+ +D ++ ++ A+NY
Sbjct: 823 TFSLAVSDPQNGSFSD-VLQKRLFNAMNY 850
>U64840-4|AAB04962.1| 316|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 68 protein.
Length = 316
Score = 26.6 bits (56), Expect = 5.3
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +2
Query: 50 QVFTIIKMVKNYSSLLLFVCITFLVIVS 133
++ TII++V + S +L +C FL+ +S
Sbjct: 19 RILTIIELVYSIPSFILLICFQFLLGIS 46
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Frame = -2
Query: 224 CTQHCNLKC--S*QHPIRSCR*AC 159
C QHCNL+C + Q + C+ C
Sbjct: 200 CNQHCNLECQPTCQQAVSQCQQQC 223
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,192,210
Number of Sequences: 27780
Number of extensions: 159642
Number of successful extensions: 453
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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