Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_O12
(238 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0737 - 20572068-20572290,20572785-20572841,20573482-205736... 35 0.008
03_02_0553 - 9420960-9421164,9421634-9421812,9421902-9421970,942... 35 0.011
07_01_0911 - 7664498-7664704,7664790-7664858,7666441-7666569 34 0.018
12_01_0001 + 1777-1935,2002-2109,2492-2560,2652-2836,3040-3055 33 0.024
11_01_0002 + 3386-3541,3619-3717,4114-4182,4275-4459,4662-4677 33 0.024
07_03_1525 + 27448257-27448582,27450741-27450973,27451280-274529... 31 0.099
06_01_1037 - 8140602-8140782,8141489-8141545,8141649-8141845,814... 31 0.099
12_01_0130 + 977181-977828 29 0.70
11_04_0167 + 14382976-14385244,14389373-14389842 28 0.92
04_04_0149 - 23123020-23123034,23123100-23123143,23123916-231239... 28 1.2
04_03_0977 + 21381857-21383757,21384299-21384458,21384669-213847... 27 1.6
11_01_0179 - 1412391-1412863,1412947-1413412,1413504-1414551,141... 27 2.1
10_08_0239 - 16099673-16100251 27 2.1
06_03_0757 + 24267599-24268882 27 2.1
05_07_0041 + 27261968-27262145,27262160-27262717,27262814-27263589 27 2.1
10_07_0161 - 13674631-13675433,13675793-13675862 27 2.8
03_04_0091 + 17241555-17241602,17241685-17241822,17241901-172421... 27 2.8
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 27 2.8
06_01_0196 + 1520015-1520191,1520483-1520527,1521851-1521910,152... 26 3.7
05_01_0576 - 5130589-5131995 26 4.9
03_06_0088 - 31562596-31563096 26 4.9
01_01_0179 + 1517379-1517721,1518092-1518376,1519462-1519699,151... 26 4.9
11_06_0652 - 25906001-25906237,25906345-25906830 25 6.5
07_03_1175 - 24555965-24556117,24557809-24558264,24558270-245584... 25 6.5
05_04_0144 + 18389877-18390431 25 6.5
03_03_0274 - 16089322-16089365,16089604-16089616,16090367-160907... 25 6.5
03_01_0389 + 3021849-3022136,3022237-3022753,3022835-3022988,302... 25 6.5
12_02_1139 - 26402332-26402367,26402915-26402953,26403136-264032... 25 8.6
10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,826... 25 8.6
08_02_1298 - 25964937-25965039,25965297-25965363,25965540-259656... 25 8.6
06_01_0096 - 794148-794246,795682-796975,798960-799417 25 8.6
05_03_0163 + 9070781-9071320 25 8.6
04_03_0422 + 15746168-15746620 25 8.6
>08_02_0737 -
20572068-20572290,20572785-20572841,20573482-20573672,
20574566-20574700,20575722-20575871
Length = 251
Score = 35.1 bits (77), Expect = 0.008
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +1
Query: 4 RGADALKAMKQYNGVPLDGRAMNIQI 81
R +DA+ A+K+YN V LDG+AM I++
Sbjct: 104 RRSDAIAALKRYNNVLLDGKAMKIEV 129
>03_02_0553 -
9420960-9421164,9421634-9421812,9421902-9421970,
9422452-9422607,9422756-9422968
Length = 273
Score = 34.7 bits (76), Expect = 0.011
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1
Query: 1 ARGADALKAMKQYNGVPLDGRAMNIQI 81
AR DA+ A+K+YN V LDG+ M I+I
Sbjct: 154 ARRGDAVAAVKKYNNVQLDGKPMKIEI 180
>07_01_0911 - 7664498-7664704,7664790-7664858,7666441-7666569
Length = 134
Score = 33.9 bits (74), Expect = 0.018
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1
Query: 1 ARGADALKAMKQYNGVPLDGRAMNIQI 81
AR DAL+A+K+Y+GV LDG M I +
Sbjct: 74 ARKVDALEAIKRYDGVILDGNPMKIDL 100
>12_01_0001 + 1777-1935,2002-2109,2492-2560,2652-2836,3040-3055
Length = 178
Score = 33.5 bits (73), Expect = 0.024
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +1
Query: 1 ARGADALKAMKQYNGVPLDGRAMNIQI 81
+R +DAL A+K+YN V LDG+ M +++
Sbjct: 120 SRKSDALAAVKRYNNVQLDGKPMKLEL 146
>11_01_0002 + 3386-3541,3619-3717,4114-4182,4275-4459,4662-4677
Length = 174
Score = 33.5 bits (73), Expect = 0.024
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +1
Query: 1 ARGADALKAMKQYNGVPLDGRAMNIQI 81
+R +DAL A+K+YN V LDG+ M +++
Sbjct: 116 SRKSDALAAVKRYNNVQLDGKPMKLEL 142
>07_03_1525 +
27448257-27448582,27450741-27450973,27451280-27452919,
27453129-27453575
Length = 881
Score = 31.5 bits (68), Expect = 0.099
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2
Query: 143 TGGPVRKNTNRGGGPNRNQNASNSGGMRG 229
+GGPV + GGG R Q A+NSGG G
Sbjct: 10 SGGPVMGDITGGGGELRVQIAANSGGQGG 38
>06_01_1037 -
8140602-8140782,8141489-8141545,8141649-8141845,
8143174-8143242,8143347-8143490,8144055-8144225
Length = 272
Score = 31.5 bits (68), Expect = 0.099
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +1
Query: 4 RGADALKAMKQYNGVPLDGRAMNIQI 81
R ++A+ A+K+YN V LDG+ M I++
Sbjct: 137 RRSEAVAALKRYNNVRLDGKPMKIEV 162
>12_01_0130 + 977181-977828
Length = 215
Score = 28.7 bits (61), Expect = 0.70
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 146 GGPVRKNTNRGGGPNRNQNASNSGG 220
GG KN + GG N N+N+ +GG
Sbjct: 153 GGNSGKNKGKNGGHNNNRNSGGNGG 177
>11_04_0167 + 14382976-14385244,14389373-14389842
Length = 912
Score = 28.3 bits (60), Expect = 0.92
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 86 TSEVSSFRSEIKTRIASGNTGGPVRKNTNRGGGPNRNQNASNSGG 220
T EV F+ + +A GN G ++ GGG + + ++S+S G
Sbjct: 426 TGEVPKFKPSVNV-LAQGNLFGQSSGSSGGGGGSDGDSSSSDSAG 469
>04_04_0149 -
23123020-23123034,23123100-23123143,23123916-23123937,
23124003-23124068,23125100-23125734,23125966-23126035,
23126150-23126209
Length = 303
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 134 SGNTGGPVRKNTNRGGGPNRNQNAS 208
SG+ GG RK+ N GGG N + ++S
Sbjct: 134 SGSVGGMHRKHYNNGGGLNLSSSSS 158
>04_03_0977 +
21381857-21383757,21384299-21384458,21384669-21384717,
21385117-21385169
Length = 720
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 119 KTRIASGNTGGPVRKNTNRGGGPNRNQNASNSGGMRGARR 238
+ R+ + G P ++ GG N N ++S+S RG R+
Sbjct: 123 RRRLDDDDDGNPNPRSRRNRGGENNNDDSSSSYNGRGKRK 162
>11_01_0179 - 1412391-1412863,1412947-1413412,1413504-1414551,
1414639-1414725,1416244-1416411,1416785-1416958,
1417662-1417720,1418132-1420154,1420549-1420647,
1420998-1421796,1422101-1422120,1422446-1422513
Length = 1827
Score = 27.1 bits (57), Expect = 2.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 6 RSRCFKGYEAI*WSATRWESHEYT 77
RS CF +++ SATR +SHE+T
Sbjct: 1080 RSCCFGSSDSLVASATRLKSHEFT 1103
>10_08_0239 - 16099673-16100251
Length = 192
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 134 SGNTGGPVRKNTNRGGGPNRNQNASNSGGMRG 229
SG G + N GGP N NA +GG G
Sbjct: 139 SGTGSGSSYADNNYYGGPYANANAGGNGGGNG 170
>06_03_0757 + 24267599-24268882
Length = 427
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 137 GNTGGPVRKNTNRGGGPNRNQNASNSGGMRGARR 238
GNT RK GG N N SGG G R+
Sbjct: 284 GNTNRRNRKGNGGRGGGNGGGNGGGSGGGGGTRQ 317
>05_07_0041 + 27261968-27262145,27262160-27262717,27262814-27263589
Length = 503
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +2
Query: 137 GNTGGPVRKNTNRGGGPNRNQNASN-SGGMRGAR 235
G GG N G G N N +N + G GAR
Sbjct: 28 GGNGGASASTPNNGNGGNNGNNGNNGNNGNNGAR 61
>10_07_0161 - 13674631-13675433,13675793-13675862
Length = 290
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 137 GNTGGPVRKNTNRGGGPNRNQNASNSGGMRG 229
G TGG + RGGG N +N + +GG G
Sbjct: 149 GWTGGG-GSSGGRGGGTNNRRNCNGNGGRSG 178
>03_04_0091 +
17241555-17241602,17241685-17241822,17241901-17242198,
17242281-17242513,17242632-17242827,17242911-17243032,
17243100-17243165,17243373-17243436,17243851-17244176
Length = 496
Score = 26.6 bits (56), Expect = 2.8
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Frame = +2
Query: 122 TRIASGNTGGPVRKNTNRGG--GPN---RNQNASNSGGMRG 229
TR +GN GG R + RGG G N R +NSG RG
Sbjct: 396 TRGDNGNAGGGGRYQSGRGGYRGDNFRGRGGGYANSGNYRG 436
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +2
Query: 137 GNTGGPVRKNTNRGGGPNRNQNASNSGGMRGARR 238
G GG K+ GGG NR +SGG G R
Sbjct: 203 GGGGGGYNKSGGGGGGYNRGGGDFSSGGGGGYNR 236
>06_01_0196 +
1520015-1520191,1520483-1520527,1521851-1521910,
1522246-1522358,1522432-1522642,1523087-1523133,
1523211-1523369,1523521-1523624,1524300-1524634
Length = 416
Score = 26.2 bits (55), Expect = 3.7
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 80 LATSEVSSFRSEIKTRIASGNTGGPVRKNT-NRGGGPNRNQNASNSGG 220
L + ++SFR+ S G P R++ N GG ASNSGG
Sbjct: 339 LCRTGIASFRTTAAPPPPS-LAGSPARRSRRNNSGGGGGEHEASNSGG 385
>05_01_0576 - 5130589-5131995
Length = 468
Score = 25.8 bits (54), Expect = 4.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 119 KTRIASGNTGGPVRKNTNRGGGPNRNQNASNSGGMR 226
+TR A ++ P + GGG N+ A+ GG R
Sbjct: 70 RTRKAPSSSSSPSHSDGGGGGGGEGNEPAAERGGGR 105
>03_06_0088 - 31562596-31563096
Length = 166
Score = 25.8 bits (54), Expect = 4.9
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 122 TRIASGNTGGPV-RKNTNRGGGPNRNQNASNSGGMRGAR 235
TR A G GG + + + GGG + A+ GG GAR
Sbjct: 69 TRGAGGRDGGQLGARGASGGGGRFGARGAAGGGGRFGAR 107
>01_01_0179 +
1517379-1517721,1518092-1518376,1519462-1519699,
1519796-1519946,1520049-1520446,1520552-1520573
Length = 478
Score = 25.8 bits (54), Expect = 4.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 158 RKNTNRGGGPNRNQNASNSGGMRGA 232
R + RGGG +R N GG GA
Sbjct: 13 RSSGGRGGGADREANGGGGGGGGGA 37
>11_06_0652 - 25906001-25906237,25906345-25906830
Length = 240
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 161 KNTNRGGGPNRNQNASNSGGMRGARR 238
KN N GG N+ +GG G RR
Sbjct: 172 KNGNNNGGWNKGGGQQQNGGKGGKRR 197
>07_03_1175 -
24555965-24556117,24557809-24558264,24558270-24558436,
24558468-24558756,24559620-24559726,24559841-24559909,
24560001-24560109
Length = 449
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 137 GNTGGPVRKNTNRGGGPNRNQNASNSG 217
G+ GG N +GGG N NSG
Sbjct: 252 GSNGGNSASNFGQGGGFGENSGGYNSG 278
>05_04_0144 + 18389877-18390431
Length = 184
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = +2
Query: 95 VSSFRSEIKTRIASGNTGGPVRKNTNRGGGPNRNQNASNSGGMR 226
+S R+E+ R P R GGG R GG R
Sbjct: 1 MSRRRAEVAARCDGSGGRRPARPARRHGGGGRRRHRRCGGGGWR 44
>03_03_0274 -
16089322-16089365,16089604-16089616,16090367-16090714,
16090771-16090974,16091403-16091504,16091710-16091741,
16092668-16093655,16094461-16094711,16095786-16097795,
16097903-16097954
Length = 1347
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 120 KLALLVETLEAPLGKIPTEVVDQTEIKMLVI 212
KLALL + GK+PTE+ IK L++
Sbjct: 357 KLALLDLSFNNFNGKLPTEIASMGSIKALML 387
>03_01_0389 +
3021849-3022136,3022237-3022753,3022835-3022988,
3023076-3023166,3024556-3024627,3026366-3026689
Length = 481
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 134 SGNTGGPVRKNTNRGGGPNRNQNASNSGGMRGARR 238
SG GG R+ GGG R + + GG G RR
Sbjct: 178 SGYGGGGNRRGNGGGGGGGR-RGQEHHGGFDGQRR 211
>12_02_1139 -
26402332-26402367,26402915-26402953,26403136-26403287,
26403496-26403997,26404260-26404373,26404509-26404736,
26405375-26405457,26405677-26405824,26406778-26406861
Length = 461
Score = 25.0 bits (52), Expect = 8.6
Identities = 13/66 (19%), Positives = 29/66 (43%)
Frame = +2
Query: 32 SNIMECHSMGEP*IYKLATSEVSSFRSEIKTRIASGNTGGPVRKNTNRGGGPNRNQNASN 211
+ ++ +S+G + + E+S + + +AS +T P + T + + N
Sbjct: 326 AGVLPTNSLGSSKLKPKPSDEISEEVNSQPSNLASRSTSNPKERPTQVNASSKKRLSLPN 385
Query: 212 SGGMRG 229
+G M G
Sbjct: 386 NGTMGG 391
>10_05_0026 +
8262237-8262899,8263300-8263509,8263599-8265480,
8265508-8265704,8275672-8275824
Length = 1034
Score = 25.0 bits (52), Expect = 8.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 152 PVRKNTNRGGGPNRNQNASNSG 217
P+ + G GPN N N +N+G
Sbjct: 221 PMVLTRSNGNGPNNNNNNNNNG 242
>08_02_1298 -
25964937-25965039,25965297-25965363,25965540-25965661,
25965868-25965951,25966138-25966234,25966330-25966372,
25966490-25966560,25966751-25966878,25967168-25967258,
25967357-25967472,25967566-25967639
Length = 331
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 120 KLALLVETLEAPLGKIPTEVVDQTEIKML 206
+L L + P GK+P E +D T +K L
Sbjct: 200 RLGRLDSSTADPAGKLPEETLDATALKTL 228
>06_01_0096 - 794148-794246,795682-796975,798960-799417
Length = 616
Score = 25.0 bits (52), Expect = 8.6
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 56 MGEP*IYKLATSEVSSFRSEIKTRIASGNTGGPVRKNT-NRGGGPNRNQNASNSGG 220
M E + + +S + E K + A+ V KN N GGG N N +GG
Sbjct: 1 MSEQPLPQPRSSMREALEKEDKEKAAAAKEKAAVPKNGGNGGGGKNGGGNGGGNGG 56
>05_03_0163 + 9070781-9071320
Length = 179
Score = 25.0 bits (52), Expect = 8.6
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 134 SGNTGGPVRKNTNRGGGPNRNQNASNSGGMRGARR 238
S GG ++ GGG R+Q A GG G R
Sbjct: 14 SRGAGGWSQRAEGWGGGGGRSQRAEGGGGGGGRSR 48
>04_03_0422 + 15746168-15746620
Length = 150
Score = 25.0 bits (52), Expect = 8.6
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +2
Query: 56 MGEP*IYKLATSEVSSFRSEIKTRIASGNTGGPVRKNTNRGGGPNRNQNASNSGGMRG 229
+G+P + ++ EV E+ R+A TGG G G + + S GG G
Sbjct: 44 VGDPGVGEVGVGEVG----EVDGRMAERTTGGEGSGGGGGGEGGDGGREGSGDGGGEG 97
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,614,314
Number of Sequences: 37544
Number of extensions: 92555
Number of successful extensions: 454
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 449
length of database: 14,793,348
effective HSP length: 57
effective length of database: 12,653,340
effective search space used: 265720140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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