Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_O12
(238 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical pr... 30 0.25
Z69361-3|CAA93289.1| 533|Caenorhabditis elegans Hypothetical pr... 29 0.58
Z68882-20|CAA93112.1| 533|Caenorhabditis elegans Hypothetical p... 29 0.58
Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical pr... 28 1.0
Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical pr... 28 1.0
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 28 1.0
DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping... 28 1.0
AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical ... 28 1.0
AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical ... 28 1.0
Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical pr... 27 1.3
Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical pr... 27 1.3
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 27 1.8
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 27 1.8
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 27 2.4
AF016439-1|AAB65898.3| 721|Caenorhabditis elegans Hypothetical ... 27 2.4
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 26 3.1
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 25 5.4
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 25 5.4
Z75531-3|CAA99799.1| 172|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 25 7.2
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 25 7.2
AF040647-9|AAB94989.1| 336|Caenorhabditis elegans Hypothetical ... 25 7.2
AC084153-16|AAK84590.1| 233|Caenorhabditis elegans Hypothetical... 25 7.2
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 25 7.2
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z49132-9|CAE18049.1| 141|Caenorhabditis elegans Hypothetical pr... 25 9.5
U97593-7|AAB52878.1| 591|Caenorhabditis elegans Prion-like-(q/n... 25 9.5
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 25 9.5
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 25 9.5
U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein. 25 9.5
U23147-5|AAC46686.2| 308|Caenorhabditis elegans Hypothetical pr... 25 9.5
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 25 9.5
AL032618-4|CAB63367.1| 353|Caenorhabditis elegans Hypothetical ... 25 9.5
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 25 9.5
>Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical
protein T26E3.1 protein.
Length = 233
Score = 29.9 bits (64), Expect = 0.25
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +2
Query: 65 P*IYKLATSEVSSFRSEIKTRIASGNTGGPVRKNTNRGGGPNRNQNASNSGGMR 226
P ++ + + +F S GN GG R N GG P N N + +GG R
Sbjct: 4 PLVFLIGFAAAGNFGSSSSESCEDGNGGGRPRPG-NGGGRPPGNGNGNGNGGGR 56
>Z69361-3|CAA93289.1| 533|Caenorhabditis elegans Hypothetical
protein T13H10.1 protein.
Length = 533
Score = 28.7 bits (61), Expect = 0.58
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 83 ATSEVSSFRSEIKTRIASGNTGGPVRKNTNRGGGPNRNQN 202
A V R ++TRI +GN+ P K+ +R N+N++
Sbjct: 445 AEEGVKKNRRPVRTRIRNGNSPSPGFKSQSRSAAENQNKS 484
>Z68882-20|CAA93112.1| 533|Caenorhabditis elegans Hypothetical
protein T13H10.1 protein.
Length = 533
Score = 28.7 bits (61), Expect = 0.58
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 83 ATSEVSSFRSEIKTRIASGNTGGPVRKNTNRGGGPNRNQN 202
A V R ++TRI +GN+ P K+ +R N+N++
Sbjct: 445 AEEGVKKNRRPVRTRIRNGNSPSPGFKSQSRSAAENQNKS 484
>Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 27.9 bits (59), Expect = 1.0
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 162 KIPTEVVDQTEIKMLVIVVECE 227
+IPT+++D+ E + + +VECE
Sbjct: 148 RIPTDILDELEFRFISNMVECE 169
>Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 27.9 bits (59), Expect = 1.0
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 162 KIPTEVVDQTEIKMLVIVVECE 227
+IPT+++D+ E + + +VECE
Sbjct: 171 RIPTDILDELEFRFISNMVECE 192
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 27.9 bits (59), Expect = 1.0
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 10 ADALKAMKQYNGVPLDGRAMNIQISYFRS 96
A A +A+ Q+NGV +GRA+ + ++ R+
Sbjct: 56 AAAQRAVDQFNGVDFNGRALRVNLAQNRN 84
>DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping
protein protein.
Length = 770
Score = 27.9 bits (59), Expect = 1.0
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 162 KIPTEVVDQTEIKMLVIVVECE 227
+IPT+++D+ E + + +VECE
Sbjct: 132 RIPTDILDELEFRFISNMVECE 153
>AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 27.9 bits (59), Expect = 1.0
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 162 KIPTEVVDQTEIKMLVIVVECE 227
+IPT+++D+ E + + +VECE
Sbjct: 148 RIPTDILDELEFRFISNMVECE 169
>AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 27.9 bits (59), Expect = 1.0
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 162 KIPTEVVDQTEIKMLVIVVECE 227
+IPT+++D+ E + + +VECE
Sbjct: 171 RIPTDILDELEFRFISNMVECE 192
>Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical
protein F22B8.6 protein.
Length = 392
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +2
Query: 116 IKTRIASGNTGGPVRKNTNRGGGPNRNQNASNSGGMRGAR 235
+ T N G P R + RGG P R+ N + GA+
Sbjct: 32 MSTTYKQDNPGEPKRYDYARGGNPTRDVLQKNLAALEGAK 71
>Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical
protein ZK792.5 protein.
Length = 630
Score = 27.5 bits (58), Expect = 1.3
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 77 KLATSEVSSFRSEI--KTRIASGNTGGPVRKNTNRGGGPNRNQNASNSGGMRG 229
K E ++FR+ + R SGN GG R GG RN GG RG
Sbjct: 32 KKPQEERNNFRTFLAKNERFGSGNRGGGGR-GRGGDGGFRRNDRGGRGGGGRG 83
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 86 TSEVSSFRSEIKTR-IASGNTGGPVRKNTNRGGGPNRNQNASNSGG 220
T + +S I+ R IASG GG ++ R G +R Q++ +GG
Sbjct: 199 TRKTREAKSVIEEREIASGFGGGYEDRDRERSGSRDRRQDSYRNGG 244
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +2
Query: 134 SGNTGGPVRKNTNRGGGPNRNQNASNSGGMRG 229
+GN+G N G N N N +N G G
Sbjct: 237 NGNSGNGNGNNAGNSGNGNGNSNGNNGNGSNG 268
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 140 NTGGPVRKNTNRGGGPNRNQNASNSG 217
N G N+N G G + N N +N+G
Sbjct: 224 NNSGSGNGNSNSGNGNSGNGNGNNAG 249
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +2
Query: 134 SGNTGGPVRKNTNRGGGPNRNQNASN--SGGMRGAR 235
SG GG ++ GGGP+R + N +GG G R
Sbjct: 246 SGGGGGGYMRSGGGGGGPDRRDHRDNDRNGGGGGHR 281
>AF016439-1|AAB65898.3| 721|Caenorhabditis elegans Hypothetical
protein R02F11.2 protein.
Length = 721
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 131 ASGNTGGPVRKNTNRGGGPNRNQNASNSGGMRGARR 238
+SGN GG R GGG R N+ G R R
Sbjct: 247 SSGNGGGRPRPGNGGGGGGVRPSNSGCDAGWRRFNR 282
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +2
Query: 119 KTRIASGNTGGPVRKNTNRGGGPNRNQNASNSGGMR 226
KT G N NR GP N +N+G R
Sbjct: 481 KTANGGGGNNNNNNNNNNRNNGPPPRNNGNNNGNGR 516
Score = 24.6 bits (51), Expect = 9.5
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 5/35 (14%)
Frame = +2
Query: 140 NTGGPVRKNTNRGGGPNR-----NQNASNSGGMRG 229
N+GG N R GG N N+ N+ G RG
Sbjct: 372 NSGGGCEMNCRRNGGGNNDGCGCNRRGGNNNGNRG 406
Score = 24.6 bits (51), Expect = 9.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 134 SGNTGGPVRKNTNRGGGPNRNQNASNSGGMRGAR 235
+GN GG ++ N G N N N +N+ G R R
Sbjct: 402 NGNRGGNSQECGNGGCPWNGNNNNNNNNGNRPRR 435
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 158 RKNTNRGGGPNRNQNASNS 214
+K N GGG N N N +N+
Sbjct: 480 KKTANGGGGNNNNNNNNNN 498
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +2
Query: 140 NTGGPVRKNTNRGGGPNRNQNASNSGG 220
N GG R+N N+ + N N N G
Sbjct: 551 NGGGGNRRNNNKNSSNSNNNNNFNGNG 577
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 25.4 bits (53), Expect = 5.4
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 98 SSFRSEIKTRIASGNTGGPVRKNTNRGGGPNRNQNASNSGGMRGARR 238
SSF + + R G GG + N + G R N SN G RG R
Sbjct: 453 SSFSNSNEWRSRGGGNGGRFQNNYSENNG--RQSNGSN-GRWRGNNR 496
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 25.4 bits (53), Expect = 5.4
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 98 SSFRSEIKTRIASGNTGGPVRKNTNRGGGPNRNQNASNSGGMRGARR 238
SSF + + R G GG + N + G R N SN G RG R
Sbjct: 355 SSFSNSNEWRSRGGGNGGRFQNNYSENNG--RQSNGSN-GRWRGNNR 398
>Z75531-3|CAA99799.1| 172|Caenorhabditis elegans Hypothetical
protein C54D10.3 protein.
Length = 172
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 161 KNTNRGGGPNRNQNASNSGG 220
K NR G N N N +N+GG
Sbjct: 108 KTCNRCSGGNNNNNNNNNGG 127
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 4 RGADALKAMKQYNGVPLDGRAMNIQISYFR 93
R DAL+A+ +NG+ L + I++SY R
Sbjct: 92 REEDALRAVSSFNGLRLQNK--TIKVSYAR 119
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 25.0 bits (52), Expect = 7.2
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 13 DALKAMKQYNGVPLDGRAMNIQIS 84
D LKAM+++NG L+G + ++
Sbjct: 422 DCLKAMEEWNGKELEGTVVEASLA 445
>AF040647-9|AAB94989.1| 336|Caenorhabditis elegans Hypothetical
protein F54D12.8 protein.
Length = 336
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 123 VFISLLKLLTSEVANLYIHGSPI 55
+FI L KL TSE + + GSP+
Sbjct: 9 LFIELWKLTTSETYMVAVKGSPV 31
>AC084153-16|AAK84590.1| 233|Caenorhabditis elegans Hypothetical
protein Y22D7AL.16 protein.
Length = 233
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 155 VRKNTNRGGGPNRNQNASNSGGMRG 229
V+K R G N +QN S G +RG
Sbjct: 143 VKKRMYRHGSRNSSQNVSVGGALRG 167
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 25.0 bits (52), Expect = 7.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 28 MKQYNGVPLDGRAMNIQISYFRSQ*FQE*NKNSHC*WK 141
+K+Y G L G ++ QISY + F + + HC +K
Sbjct: 559 IKEYEGATLMGCHLHPQISYTKFPDFSKGIQALHCGYK 596
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 10 ADALKAMKQYNGVPLDGRAMNIQISY 87
A A +A++Q NGV +GR N++++Y
Sbjct: 58 AGAQRAVEQLNGVAFNGR--NLRVNY 81
>Z49132-9|CAE18049.1| 141|Caenorhabditis elegans Hypothetical
protein ZK666.11 protein.
Length = 141
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 136 WKHWRPR*EKYQQRWWTKQKS 198
WKH+R R + WW +KS
Sbjct: 121 WKHFRKRFINEECGWWIFEKS 141
>U97593-7|AAB52878.1| 591|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform b protein.
Length = 591
Score = 24.6 bits (51), Expect = 9.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 98 SSFRSEIKTRIASGNTGGPVRKNTNRGGGPNRNQNASNS 214
SS+ +E TR+ G TG PV N + + N+ +S
Sbjct: 130 SSYTTE--TRVTGGGTGAPVSNNYSNQNYSSSAYNSQSS 166
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 24.6 bits (51), Expect = 9.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 98 SSFRSEIKTRIASGNTGGPVRKNTNRGGGPNRNQNASNS 214
SS+ +E TR+ G TG PV N + + N+ +S
Sbjct: 549 SSYTTE--TRVTGGGTGAPVSNNYSNQNYSSSAYNSQSS 585
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 24.6 bits (51), Expect = 9.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 98 SSFRSEIKTRIASGNTGGPVRKNTNRGGGPNRNQNASNS 214
SS+ +E TR+ G TG PV N + + N+ +S
Sbjct: 714 SSYTTE--TRVTGGGTGAPVSNNYSNQNYSSSAYNSQSS 750
>U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein.
Length = 790
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +2
Query: 146 GGPVRKNTNRGGGPNRNQ--NASNSGGMRG 229
GGP + + GGG N N N GG G
Sbjct: 433 GGPTGSSGSGGGGSNSNSGGGGGNGGGGNG 462
Score = 24.6 bits (51), Expect = 9.5
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 131 ASGNTGGPVRKNTNRGGGPNRNQNASNSGGMRG 229
+SG+ GG N+ GGG N N GG G
Sbjct: 438 SSGSGGGGSNSNSGGGGG---NGGGGNGGGGNG 467
>U23147-5|AAC46686.2| 308|Caenorhabditis elegans Hypothetical
protein C18H9.1 protein.
Length = 308
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 137 GNTGGPVRKNTNRGGGPNRNQNASNSGGM 223
GN G + N N+ GG N+ N ++ G+
Sbjct: 227 GNIGNGQKMNRNKNGGRNQGGNHPDNMGI 255
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 24.6 bits (51), Expect = 9.5
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 119 KTRIASGNTGGPVRKNTNRGGGPNRNQNASNSGGMRG 229
K A G GGP GGGP R GG G
Sbjct: 610 KNNQAGGGPGGP-----GGGGGPPRGPGGGGGGGPTG 641
>AL032618-4|CAB63367.1| 353|Caenorhabditis elegans Hypothetical
protein Y42A5A.4 protein.
Length = 353
Score = 24.6 bits (51), Expect = 9.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 95 VSSFRSEIKTRIASGNTGGPVRKNTNRGGGPNRNQNASNSG 217
++S RS + +GN+ V KN + GG + N N + +G
Sbjct: 303 LTSKRSPNYLPLLNGNSNNLVSKNFSLQGGNHGNNNNNGNG 343
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 24.6 bits (51), Expect = 9.5
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 119 KTRIASGNTGGPVRKNTNRGGGPNRNQNASNSGGMRG 229
K A G GGP GGGP R GG G
Sbjct: 610 KNNQAGGGPGGP-----GGGGGPPRGPGGGGGGGPTG 641
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,742,119
Number of Sequences: 27780
Number of extensions: 77913
Number of successful extensions: 396
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 12,740,198
effective HSP length: 58
effective length of database: 11,128,958
effective search space used: 222579160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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